FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBL (Triosephosphate isomerase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/214 (37.85%), Postives = 104/214 (48.60%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R + GNWK N T +E ++V L L VK S V AQN ++ GA+TGEI+ +ML L + VI+GHSERR NE +E V KV A L I C GE+LE+RE T +V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGS Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVCLPAVLEEVKGS---NIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGENVADKVRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBK (Triosephosphate isomerase OS=Clostridium botulinum (strain Okra / Type B1) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/214 (37.85%), Postives = 104/214 (48.60%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R + GNWK N T +E ++V L L VK S V AQN ++ GA+TGEI+ +ML L + VI+GHSERR NE +E V KV A L I C GE+LE+RE T +V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGS Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVCLPAVLEEVKGS---NIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGESVADKVRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ACIBT (Triosephosphate isomerase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=tpiA PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/217 (37.33%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 52 FVGGNWK-------CNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +V GNWK N EE K+++ ++ + R + VA V GA+TGE+SAE+L + +I V++GHSERR I + E + K+ AL+ G+ VI CVGE+LEQRE G +VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L T + I+YGGS Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGS 223
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ACIBS (Triosephosphate isomerase OS=Acinetobacter baumannii (strain SDF) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/217 (37.33%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 52 FVGGNWK-------CNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +V GNWK N EE K+++ ++ + R + VA V GA+TGE+SAE+L + +I V++GHSERR I + E + K+ AL+ G+ VI CVGE+LEQRE G +VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L T + I+YGGS Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGS 223
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ACIBC (Triosephosphate isomerase OS=Acinetobacter baumannii (strain ACICU) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.008e-27 Identity = 81/217 (37.33%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 52 FVGGNWK-------CNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +V GNWK N EE K+++ ++ + R + VA V GA+TGE+SAE+L + +I V++GHSERR I + E + K+ AL+ G+ VI CVGE+LEQRE G +VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L T + I+YGGS Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGS 223
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_SYMTH (Triosephosphate isomerase OS=Symbiobacterium thermophilum GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27 Identity = 78/208 (37.50%), Postives = 103/208 (49.52%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 V NWK + T E ++ ++ + + + AQN K GAFTGE+S MLV+ VILGHSERR + E +E VG KV AL GL I C+GETLE+++AG V Q A + ++ +N+V+AYEPVWAIGTG+ P AQ +R + PE AA RI YGGS Sbjct: 6 VAANWKMHKTQPEARQFLADFLPREAGMSGVEIVICPPFTALAAVAGGLTGTRVGLGAQNMSDKPSGAFTGEVSGAMLVDAGCRYVILGHSERRRLFGESDEVVGAKVRAALQHGLIPILCIGETLEEQQAGEADAVNRRQLLAGLEGLTPEQVANLVIAYEPVWAIGTGRNCDPGDAQARIAAVRAVVAEAFGPEAAARVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACSK (Triosephosphate isomerase OS=Bacillus clausii (strain KSM-K16) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27 Identity = 80/212 (37.74%), Postives = 103/212 (48.58%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK + GNWK N T E V + L+++ + AQ + GAFTGEIS + L ++ + VI+GHSERR + E +E V KV A + L I C GET E+REAG VV Q + +S V+AYEP+WAIGTGK AT A E +R+ + AN S E A A RI YGGS Sbjct: 2 RKPIIAGNWKMNKTIGEAVDFVEAVKANVPAQATVDSVVCAPALFLDRLLQAVKGTELKIGAQTMHFEDNGAFTGEISPKALSDMGVHYVIIGHSERREMFAETDETVNKKVHAAFAHHLVPIMCCGETAEEREAGKMEAVVKEQVENGLAGLSEEQVKQTVIAYEPIWAIGTGKSATEKDANEACAYVRQTVAANFSEEAAEAIRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_RHOP5 (Triosephosphate isomerase OS=Rhodopseudomonas palustris (strain BisA53) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 78/209 (37.32%), Postives = 102/209 (48.80%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG---FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK NG ++ + ++L G L L G F V AQ+C GA TG++SAEMLV+ +I+GHSERR E + V K A G I CVGET +R+AG T++VV Q ++ N V+AYEPVWAIGTG T ++VH +R L E AA RI+YGGS Sbjct: 9 IAGNWKMNGLKAQLAEFEAML-AGAPALADKADLLVCPPATLLHAFGQKLGNGARSFAVGAQDCHANVSGAHTGDLSAEMLVDAGASAIIVGHSERRADHGETDSVVRAKAEAAWRAGAVAIVCVGETQAERDAGQTLDVVGRQLAGSLPDGATAENTVVAYEPVWAIGTGLTPTANDVEQVHKFIRDCLTKRFGGE-GAAVRILYGGS 215
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_RALSO (Triosephosphate isomerase OS=Ralstonia solanacearum GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 92/218 (42.20%), Postives = 113/218 (51.83%), Query Frame = 1 Query: 43 RKFFVGGNWKC----NGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R V GNWK NG E ++KI + GQ +L +S L G VA AQ+ + GAFTGE++A ML I+GHSERR E + V K AL G+ I CVGETL QREAG T VVA Q +A+ + +S +IV+AYEPVWAIGTGK AT QAQ VH LR +A +A I+YGGS Sbjct: 4 RPKLVVGNWKLHGSLNGNAELLEKIKAA---GQTRAALAVCAPFP----YLAQCQSVLA-GSSVAWGAQDVSAETRGAFTGEVAASMLSEFGCGYAIVGHSERRTYHGETDAQVAIKALRALEHGITPIVCVGETLAQREAGETELVVARQLEAVLESLSVEQLGHIVVAYEPVWAIGTGKTATSEQAQAVHAFLR-GRVAACDAGVAQRMPILYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BART1 (Triosephosphate isomerase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 75/212 (35.38%), Postives = 105/212 (49.53%), Query Frame = 1 Query: 52 FVGGNWKCNGTTEEVKKIVSVL-----NEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 F+ GNWK NGT E + ++ ++ N G + L SL G QNC G +TG+ISA ML VI+GHSERR + E + V KV A GL + C+GETLE+R+ M+V+A Q + ++ N ++AYEPVWAIGTG AT +VH+ +R + + E R++YGGS Sbjct: 8 FLAGNWKMNGTRESLGELRAIATGVSSNSGHLFEALICVPATLLSRAYDTLNGESLLLG----GQNCHFDDYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQENDAIVCAKVQAAWHAGLVALVCIGETLEERDNNKVMDVLAQQLEGSLPDDTTAENTIIAYEPVWAIGTGNTATSEDIAKVHYFIRDKICSRFGDE-GNKIRLLYGGS 214 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |