FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ACIBY (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AYE) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 83/218 (38.07%), Postives = 120/218 (55.05%), Query Frame = 1 Query: 52 FVGGNWKCN----GTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG---FHVAAQNCWVKKG-GAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +V GNWK N + +++ +L + Q L V++ L+ H AQ+ G GA+TGE+SAE+L + +I V++GHSERR I + E + K+ AL+ G+ VI CVGE+LEQRE G +VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L T + I+YGGS Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIA-LTTVQAQLQDAARTVHTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGS 223
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ACIB5 (Triosephosphate isomerase OS=Acinetobacter baumannii (strain AB0057) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.025e-26 Identity = 83/218 (38.07%), Postives = 120/218 (55.05%), Query Frame = 1 Query: 52 FVGGNWKCN----GTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG---FHVAAQNCWVKKG-GAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSN-IVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +V GNWK N + +++ +L + Q L V++ L+ H AQ+ G GA+TGE+SAE+L + +I V++GHSERR I + E + K+ AL+ G+ VI CVGE+LEQRE G +VV Q IA V++ W N +V+AYEP+WAIGTGK A+P AQ +H ++R+ L T + I+YGGS Sbjct: 9 WVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIA-LTTVQAQLQDAARTVHTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLT--PAGSNIAILYGGS 223
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCBP (Triosephosphate isomerase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tpiA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26 Identity = 81/221 (36.65%), Postives = 110/221 (49.77%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG++S L L V++GHSERR NE + V K A AL GL I C+GE L+ REAG+ + Q + +A+++ S +V AYEPVWAIGTG+VA+ A AQEV +RK L + SP IA R++YGGS Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVTAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_METFK (Triosephosphate isomerase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=tpiA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.338e-26 Identity = 80/213 (37.56%), Postives = 105/213 (49.30%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS---NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK NG + K+++ L G K AQN + GA+TGE+SA ML VI+GHSER E N + +K A A G+ I CVGETL++RE+G +A Q A+ VS + V+AYEPVWAIGT + ATP QA+ H +R+ +A P A + RIIYGGS Sbjct: 2 RRKLVVGNWKMNGNLAQNKRLLEALVRGLQDVEHVDIAVCVPYPYLFQAQKILSGTNIAWGAQNVAKHENGAYTGEVSAAMLKEFGASYVIVGHSERSDAYCESNANIAEKFAIAKHYGITPIFCVGETLQERESGVMEYAIANQLDAVLS-VSGGALLDQAVIAYEPVWAIGTNRTATPEQARAAHSFIRE-RIAAMHPGAAESVRIIYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCMS (Triosephosphate isomerase OS=Mycoplasma mycoides subsp. mycoides SC GN=tpiA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 76/212 (35.85%), Postives = 105/212 (49.53%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNI--VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 +K + GNWK NGT E + ++ ++ GL L +AAQN K GA+TGEIS ML + + VI+GHSERR + NE + V K L + I C GETL+ +E+G T+E V Q + + + I ++AYEP+WAIGTGK AT + A+EV ++R L A I YGGS Sbjct: 2 KKKVIFGNWKMNGTNESLTDFLNQVDNKIDSSKIIAGLAVPYVMLQTGL---KLAKNVKIAAQNVHYKDKGAYTGEISTTMLKEVGVEYVIIGHSERREMFNETDLDVNKKAKVLLENNITPIICCGETLQTKESGKTIEFVNNQINIMFEGIKKEDAIKAIIAYEPIWAIGTGKTATSSDAEEVCKQIRNNLSKIYDKNTAEQIIIQYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH7 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 7448) GN=tpiA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K + GNWK N T E + + + E L L+ SL +AAQN GAFTGEIS +ML +L VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T +V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGS Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGMIKE--------NFGKDTTVIYGGS 205
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHY (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae GN=tpiA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26 Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K + GNWK N T E + + + E L L+ SL +AAQN GAFTGEIS +ML +L VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T +V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGS Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGS 205
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHJ (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=tpiA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26 Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K + GNWK N T E + + + E L L+ SL +AAQN GAFTGEIS +ML +L VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T +V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGS Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGS 205
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCH2 (Triosephosphate isomerase OS=Mycoplasma hyopneumoniae (strain 232) GN=tpiA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26 Identity = 78/213 (36.62%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K + GNWK N T E + + + E L L+ SL +AAQN GAFTGEIS +ML +L VI+GHSERR I E +E + +K+ A L + CVGE+L + EAG T +V+ +Q AI V ++ ++AYEP+WAIGTGK AT A A++V +++ T +IYGGS Sbjct: 2 KKIIIGNWKMNKTVSETRDFIQKFDIFYQENVGKIKEDLDFAIAPSFISLSLISKSLTKKLEIAAQNLSQFDSGAFTGEISGKMLQDLGTKYVIIGHSERREIFKEKDEELKNKILQAQKYDLIPVFCVGESLLEFEAGLTKKVIISQINAIKS-VLNFQKAIIAYEPIWAIGTGKTATAAIAEKVCGLIKE--------NFGKNTMVIYGGS 205
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_HERA2 (Triosephosphate isomerase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=tpiA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26 Identity = 82/214 (38.32%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ + GNWK + E +V L+ LG + + L G VA AQN + GA+TGEI+ +ML L VILGHSERR E + + K AL+ GLK I CVGE +R++G VV Q + +S+ +V+AYEPVWAIGTG ATPA AQ +H +R L A + A A I YGGS Sbjct: 2 RRPLLAGNWKMHYGVSEGVALVEALS-ADLTDLTDRDVLVCPPFTLLGSL-APLLDGTAVALGAQNMHYEAKGAYTGEIAPQMLKELGCSYVILGHSERRQYFGETDALINRKAHAALANGLKPIVCVGEVKAERDSGQAESVVVGQLRGSLAGLSAEQLRGVVIAYEPVWAIGTGDTATPADAQAMHARIRAELAALSDQATADAVIIQYGGS 213 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |