FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LACJO (Triosephosphate isomerase OS=Lactobacillus johnsonii GN=tpiA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK + E+ + V+ + L K++ H A+N + + GAFTGE S ++L + I I+GHSERR +E +E + K + G+ I C GE+LE REA E V AQ KA D +++ S +V+AYEP+WAIGTGK A+ QA+E+ +R+ + + E A RI YGGS Sbjct: 6 IAGNWKLHMNPEQTIEFVNAVKGKLPDPSKVESVIAAPAVDLYVLKKTAEGSNLHTGAENAYFEVEGAFTGETSPKVLNEMGIDYCIIGHSERRGYFHETDEDINKKAKALFANGVTPIICCGESLETREANKQDEWVVAQIKAALDGLTAEQVSKLVIAYEPIWAIGTGKTASADQAEEMCKTIRETVKDLYNEETAENVRIQYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BARHE (Triosephosphate isomerase OS=Bartonella henselae GN=tpiA PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 72/208 (34.62%), Postives = 102/208 (49.04%), Query Frame = 1 Query: 52 FVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 F+ GNWK NGT E + ++ ++ L L + QNC G +TG+ISA ML VI+GHSERR + E + V KV A GL + CVGETLE+R++ ++V+ Q + ++ NI++AYEPVWA+GTG AT A EVH + + + E A R++YGGS Sbjct: 8 FIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLGGQNCHFDDYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATAENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFGDE-GAKIRLLYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIME (Triosephosphate isomerase 1 OS=Rhizobium meliloti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26 Identity = 77/208 (37.02%), Postives = 106/208 (50.96%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG--FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 V GNWK NGT + +I + EG L V ++L + AQ+C K+ GA TGE+SAEM+ + VI+GHSERR E + V K A L I CVGET E+R+AG T++++ Q ++ N V+AYEPVWAIGTG T + +E H +R+ L++ E RI+YGGS Sbjct: 9 VAGNWKMNGTRASLDQI-KAMAEGVKGDLSARVDALICPPATLLYVATALCDDSPLMIGAQDCHQKQSGAHTGEVSAEMVADCFGTHVIVGHSERRTDHGEGDALVRAKTEAAHGADLVAIVCVGETEEERKAGRTLDILKRQLSESLPDQATAENTVIAYEPVWAIGTGLTPTVSDVEEAHAFMRRELVSRFGAE-GGKMRILYGGS 214
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_THET2 (Triosephosphate isomerase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=tpiA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 79/215 (36.74%), Postives = 106/215 (49.30%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL---RPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK + T E + + L + L + K L + G+ AQ+ K GA+TGE+SA ML +L I+GHSERR E + V +K L +G+ I CVGE LE RE G + Q + + V +V+AYEPVWAIGTGK ATP A+ +H E+RK L A+ RI+YGGS Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELK--RLLPPLQSEAAVLPAFPILPVAKEVLAETQVGY--GAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQEIRKALSERYGEAFASRVRILYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_FRAP2 (Triosephosphate isomerase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tpiA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 69/206 (33.50%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 61 GNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 GNWK NG++ +K++ ++E ++ V + L V QN GA+TGE+SAEML ++ +++GHSERR + E ++ V K+ + + + C+GE+LE R+ G +V+ Q I + +S + +++AYEPVWAIGTG VA+ Q QE H +R L+A +A +I+YGGS Sbjct: 7 GNWKMNGSSASIKELCKGISEVNYNSEKVAVAVFPSSV-YVKEVLAQLPKEIGVGLQNITFYDNGAYTGELSAEMLHDVGCNYLLIGHSERRSLFGETDQDVFKKLNKIIDTSVVPVVCIGESLEDRQGGRLEKVLTTQLSLILENLSIEQLARVIIAYEPVWAIGTGVVASLEQVQETHQFIRS-LVAKVDENLAKNMKIVYGGS 210
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORPE (Triosephosphate isomerase OS=Bordetella pertussis GN=tpiA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 76/212 (35.85%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R V GNWK +G E +++ L +L ++L+ AQ+ GA+TGE++A ML V++GHSERR + E ++ V DK AL GL + CVGE+L++RE G+T+ V+ Q + +A + +VLAYEPVWAIGTG+ A+P QAQEVH +R L + ++ R++YGGS Sbjct: 7 RARLVLGNWKMHGNLAENAALLAELRAADAAAHCEMGVCVPFP--YLAQTAAALQGSAIGWGAQDVSAHAKGAYTGEVAAPMLAEFGCRWVLVGHSERRTLHAESDQLVADKARAALEAGLTPVVCVGESLQEREGGNTLGVIERQLEPVLALGRDALVRMVLAYEPVWAIGTGRTASPEQAQEVHSAIRVALDGLQASQV----RVLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORPA (Triosephosphate isomerase OS=Bordetella parapertussis GN=tpiA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 76/212 (35.85%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R V GNWK +G E +++ L +L ++L+ AQ+ GA+TGE++A ML V++GHSERR + E ++ V DK AL GL + CVGE+L++RE G+T+ V+ Q + +A + +VLAYEPVWAIGTG+ A+P QAQEVH +R L + ++ R++YGGS Sbjct: 7 RARLVLGNWKMHGNLAENAALLAELRAADAAAHCEMGVCVPFP--YLAQTAAALQGSAIGWGAQDVSAHAKGAYTGEVAAPMLAEFGCRWVLVGHSERRTLHAESDQLVADKARAALEAGLTPVVCVGESLQEREGGNTLGVIERQLEPVLALGRDALVRMVLAYEPVWAIGTGRTASPEQAQEVHSAIRVALDGLQASQV----RVLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BORBR (Triosephosphate isomerase OS=Bordetella bronchiseptica GN=tpiA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.894e-26 Identity = 76/212 (35.85%), Postives = 112/212 (52.83%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTK-AIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R V GNWK +G E +++ L +L ++L+ AQ+ GA+TGE++A ML V++GHSERR + E ++ V DK AL GL + CVGE+L++RE G+T+ V+ Q + +A + +VLAYEPVWAIGTG+ A+P QAQEVH +R L + ++ R++YGGS Sbjct: 7 RARLVLGNWKMHGNLAENAALLAELRAADAAAHCEMGVCVPFP--YLAQTAAALQGSAIGWGAQDVSAHAKGAYTGEVAAPMLAEFGCRWVLVGHSERRTLHAESDQLVADKARAALEAGLTPVVCVGESLQEREGGNTLGVIERQLEPVLALGRDALVRMVLAYEPVWAIGTGRTASPEQAQEVHSAIRVALDGLQASQV----RVLYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHR (Triosephosphate isomerase OS=Mycoplasma hyorhinis GN=tpiA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26 Identity = 76/212 (35.85%), Postives = 106/212 (50.00%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG---FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K + GNWK N T + K+ S N+ + ++ +A QN + GA+TGEISA+ML++L + I+GHSERR E + V K A+ + + CVGETLE+ EA T +V+ Q K V S +++AYEP+WAIGTGK ATP QAQ+V +RK N + I+YGGS Sbjct: 3 KTIIIGNWKMNKTFTQTKEFFSAFNQLYIENKNKINQNLDFAVALPAINVAAFSKNTTKLELAVQNMSQFEKGAYTGEISAQMLLDLNVKYAIIGHSERRQYFKETDLDVNAKTQQAIKNNIIPVVCVGETLEEYEAQKTSQVIEYQLKNSLKDV-DLSKVIVAYEPIWAIGTGKTATPEQAQQVCKFIRKQTNKNLT--------ILYGGS 205
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_LACGA (Triosephosphate isomerase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=tpiA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26 Identity = 72/208 (34.62%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK + E+ + V+ + L K++ H A+N + + GAFTGE S ++L + I I+GHSERR +E +E + K + G+ I C GE+LE REA + V AQ KA D +++ S +V+AYEP+WAIGTGK A+ QA+E+ +R+ + + E A RI YGGS Sbjct: 6 IAGNWKLHMNPEQTVEFVNAVKGKLPDPSKVESVIAAPAVDLYVLKKAAEGSDLHTGAENAYFEVEGAFTGETSPKVLNEMGIDYCIIGHSERRGYFHETDEDINKKAKALFANGVTPIICCGESLETREANKQEDWVVAQIKAALDGLTAEQVSKLVIAYEPIWAIGTGKTASADQAEEMCKTIRETVKDLYNEETAENVRIQYGGS 213 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |