FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPE (Triosephosphate isomerase OS=Mycoplasma penetrans GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25 Identity = 73/211 (34.60%), Postives = 104/211 (49.29%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K + NWK T ++K ++ +L K L+ G V AQ+ K GA+TG IS L + I I+GHSERR + NE +E V K + ++ + CVGETLE+ EA + +VV QTK VS N+V+AYEPVWAIGTGKV T + ++ ++R L S + + ++YGGS Sbjct: 2 KKLIIANWKMFKTLNDIKTFKEEFDKNIKNVKVNADYSVGVPSIYLNQAKEILK-GIKVIAQDAHFKNEGAYTGNISWSQLKDCGIDGSIIGHSERRQMFNETDETVNLKTISLVENNMQAVVCVGETLEEYEANKSFDVVWNQTKKALANVSEAQLKNVVIAYEPVWAIGTGKVPTGKEVDDLIQKVRDELSKLYSKQAVESLVVLYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPA (Triosephosphate isomerase OS=Mycobacterium paratuberculosis GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25 Identity = 79/218 (36.24%), Postives = 108/218 (49.54%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L L V++GHSERR NE + V K A AL L I C+GE LE REAG+ + Q + +S+ +V+AYEPVWAIGTG+VA+ + AQEV +RK L + S +IA + R++YGGS Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFALPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLSYGAQDLSQHDSGAYTGDISGAFLAKLGCTFVVVGHSERRTYHNEDDALVAAKAATALKHELTPIICIGEHLEVREAGNHVIHCEEQLRGSLAGLSAEQIGKVVIAYEPVWAIGTGRVASASDAQEVCAAIRKELASLASAQIADSVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCFL (Triosephosphate isomerase OS=Mycoplasma flocculare GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25 Identity = 77/213 (36.15%), Postives = 107/213 (50.23%), Query Frame = 1 Query: 46 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 K + GNWK N T E + + + + L L+ +S VAAQN GAFTGEISA+ML +L + VI+GHSERR I E+ E + +K+ A L + CVGE+L + EA T +V+ Q + V ++ ++AYEP+WAIGTGK AT A++V K + N I R+IYGGS Sbjct: 2 KKIIIGNWKMNKTVHETRDFIQKFDIFYSKNLGKIKDNLDFAIAPSFTSLALISTSKIDKLKVAAQNLSQFDSGAFTGEISAKMLQDLAVHYVIIGHSERREIFKEIGEDLTNKILQAQKYNLIPVFCVGESLSEFEANETEKVIIGQINEVKS-VLNFEKAIIAYEPIWAIGTGKTATAQIAEQV----CKLIKNNFGKNI----RVIYGGS 205
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCA1 (Triosephosphate isomerase OS=Mycobacterium avium (strain 104) GN=tpiA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25 Identity = 79/218 (36.24%), Postives = 108/218 (49.54%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L L V++GHSERR NE + V K A AL L I C+GE LE REAG+ + Q + +S+ +V+AYEPVWAIGTG+VA+ + AQEV +RK L + S +IA + R++YGGS Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFALPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLSYGAQDLSQHDSGAYTGDISGAFLAKLGCTFVVVGHSERRTYHNEDDALVAAKAAAALKHELTPIICIGEHLEVREAGNHVIHCEEQLRGSLAGLSAEQIGKVVIAYEPVWAIGTGRVASASDAQEVCAAIRKELASLASAQIADSVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_RALEJ (Triosephosphate isomerase OS=Ralstonia eutropha (strain JMP134) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.306e-25 Identity = 84/214 (39.25%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK +G+ + L EG +L ++ L G VA AQ+ + GAFTGE++A ML ++GHSERR E + V K AL G+ + CVGETL QREAG T VV Q +A D +S +VLAYEPVWAIGTGK A+ QAQ VH LR + +A I+YGGS Sbjct: 2 RQKLVIGNWKMHGSLAAN----AALLEGIKAAPARARLAVCAPFPYLAQCQALLN-GSQVAWGAQDVSAEARGAFTGEVAASMLGEFGCTYALVGHSERRTYHGESDAVVAAKALRALEFGIIPVICVGETLAQREAGETEVVVGRQLQAALDALSVEQLGRVVLAYEPVWAIGTGKTASSEQAQAVHAFLRA-EVRERDAGVADRMAILYGGS 209
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCLE (Triosephosphate isomerase OS=Mycobacterium leprae GN=tpiA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.623e-25 Identity = 79/218 (36.24%), Postives = 105/218 (48.17%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L L V++GHSERR +E + V K A AL L I C+GE LE RE G + Q + +S N+V+ YEPVWAIGTG+VA+ A AQEV +RK L A SP++A R++YGGS Sbjct: 1 MSRKSLIAGNWKMNLNHFEAIALVQKIAFSLPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLTYGAQDLSQHDLGAYTGDISGAFLAKLGCSFVLVGHSERRTYHDEGDALVAAKTAAALKNSLTPIVCIGEYLEIREVGEHVSHCQNQLRGSLAGLSPEQIGNVVIVYEPVWAIGTGRVASAADAQEVCEAIRKELGALASPQVAETVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_OLICO (Triosephosphate isomerase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.344e-25 Identity = 69/206 (33.50%), Postives = 96/206 (46.60%), Query Frame = 1 Query: 55 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + GNWK NG + ++ ++ + + + Q+C + GA TG+ISAEML + VI+GHSERR E + V K A GL I CVGET +R+AG EVV Q + +N+V+AYEPVWAIGTG T +E+H +R+ L E R++YGGS Sbjct: 9 IAGNWKMNGLKASLGELAAIGKGAGEVWRRVDLLICPPATLIFPAAAAMIGSKVAIGGQDCHAEASGANTGDISAEMLADAGATYVIVGHSERRTDHGETDAVVRAKAEAAWRAGLVAIVCVGETRAERDAGRAAEVVGRQLDGSVPDGARAANLVVAYEPVWAIGTGLTPTSQDIEEIHAVIRQNLTGRFKAE-GEGVRLLYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGI (Triosephosphate isomerase OS=Mycobacterium gilvum (strain PYR-GCK) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.344e-25 Identity = 79/218 (36.24%), Postives = 105/218 (48.17%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L ++GHSERR E +E V K AL GL I C+GE LE REAG+ +E + +S+ + V+AYEPVWAIGTG+VA+ A AQEV +R L S ++AA R++YGGS Sbjct: 1 MTRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDRVDVTVIPPFTDLRSVQTLVDGDKLRLTYGAQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHGETDELVAAKATAALKHGLTPIVCIGEQLEVREAGNHVEFNVNSLRGSLAGLSAEQIAQTVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASADVAAGVRVLYGGS 218
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_KINRD (Triosephosphate isomerase OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.344e-25 Identity = 70/153 (45.75%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 220 VAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 + AQ+ GA+TGE+SA ML L + V +GHSERR E + V K A AL+ GL I CVGE LE R+A +E Q T+A+ + + +VLAYEPVWAIGTG+VATP AQEV LR+ + A A R++YGGS Sbjct: 68 LGAQDVSEHDSGAYTGEVSAAMLAKLGVTYVAVGHSERRQYHGETDATVRAKAAKALAAGLTPIVCVGEALEIRKAEQHVEFTVGQVTQALTGLTAEQAAGLVLAYEPVWAIGTGEVATPEDAQEVCAALREAVAELFDRATADAVRVLYGGS 220
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BLOFL (Triosephosphate isomerase OS=Blochmannia floridanus GN=tpiA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.344e-25 Identity = 69/209 (33.01%), Postives = 102/209 (48.80%), Query Frame = 1 Query: 64 NWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL----RPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 NWK NG + + L ++ +VK+ L + +QN + GAFTG+ISA ML +L + V++GHSERR+ E N + K + L I C+GE E+R++GST + Q +I V ++ N ++AYEPVWAIG+G A+P Q +H +R + +A IA I YGGS Sbjct: 9 NWKLNGNKNTITNSLINLTTQLTNIPQYIKIAIAPPILYIDMVKNHLTSYNNKTIELCSQNVDIHLSGAFTGDISASMLKDLSVKYVLIGHSERRIYHKENNSLIAQKFSIIKQTELIPILCIGENKEERDSGSTQSICIQQIDSIIKLVGIKAFENTIIAYEPVWAIGSGSSASPRNVQSIHQFIRNY-IAQYDKTIANQISIQYGGS 216 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |