FC875456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.778e-40 Identity = 90/214 (42.06%), Postives = 126/214 (58.88%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ F+GGN+KCNG+ + +K V+ + + + ++ + +AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+ VI CVGETL++R+A TMEV AQ +A+ + W +V+AYEPVW+IGTG VATP QA+EVH LRKW E A RIIYGGS Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGS 216
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_MAGSM (Triosephosphate isomerase OS=Magnetococcus sp. (strain MC-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.239e-39 Identity = 95/215 (44.19%), Postives = 118/215 (54.88%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ + GNWK NGTT+ + + + +G L V+ + G + AQN V GAFTGEIS EML ++ VILGHSERR + E NE V KVA A GL I CVGETLEQREA TM+V+ Q A + + +V+AYEPVWAIGTGKVA+ AQAQE H +R L +A A RI+YGGS Sbjct: 2 RRALIAGNWKLNGTTQAATALATAVRDGVAANKPDCDVLVCPTFTVLSAVQGVVAGSGVDLGAQNMAVASSGAFTGEISGEMLKDVGCSYVILGHSERRTLFGETNEQVAQKVASAYRDGLTPILCVGETLEQREAEQTMQVLEQQLLACLPVLPADAAKQQQLVVAYEPVWAIGTGKVASTAQAQEAHAFIRGLLAKELGANVADAVRILYGGS 216
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.524e-38 Identity = 96/212 (45.28%), Postives = 117/212 (55.19%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK V GNWK N T +E + LNE L V + V A+NC K+ GA+TGE+SA M+ + VILGHSERR E E + DKV AL+ GL I C+GE LE+REA EVVAAQ ++ D +S IVLAYEPVWAIGTGK A+PAQAQE+H +R + EIA T I+YGGS Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACFN (Triosephosphate isomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.524e-38 Identity = 96/212 (45.28%), Postives = 117/212 (55.19%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK V GNWK N T +E + LNE L V + V A+NC K+ GA+TGE+SA M+ + VILGHSERR E E + DKV AL+ GL I C+GE LE+REA EVVAAQ ++ D +S IVLAYEPVWAIGTGK A+PAQAQE+H +R + EIA T I+YGGS Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGKTASPAQAQEIHAFIRSAVAEKYGKEIADNTSILYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PROA2 (Triosephosphate isomerase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.880e-38 Identity = 96/214 (44.86%), Postives = 115/214 (53.74%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKK----IVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK V GNWK N T E + I+ L E G++ + G H+AAQNC + GAFTGE+S ML VI+GHSERR + N V KV ALS GL VI CVGETL++RE G T EVV Q K + V+ +IV+AYEPVWAIGTGK A+ QAQEVH +R + S AA RI YGGS Sbjct: 2 RKKIVVGNWKMNKTIAEAVELSSAIIDQLGEVSASCEVGIAPAFPALSGVHGVISGT---GIHLAAQNCHYEDDGAFTGEVSVRMLDEAGCSYVIVGHSERRQYFGDTNPVVNLKVKKALSAGLNVILCVGETLDEREKGITTEVVTCQVKEGLEGVADIGDIVIAYEPVWAIGTGKTASSLQAQEVHASIRATVAGLYSEPAAAGVRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CHLP8 (Triosephosphate isomerase OS=Chlorobaculum parvum (strain NCIB 8327) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.290e-37 Identity = 95/212 (44.81%), Postives = 120/212 (56.60%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQT-KAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK N T E ++ + + E L V ++ G +AAQNC + GAFTGE+S ML VILGHSERR + E NE V KV AL++GL+VI CVGETL++REAG T ++V AQ + +AD VS S +V+AYEPVWAIGTGK AT QAQ+VH +R + A RI YGGS Sbjct: 2 RRTIVVGNWKMNNTIAESIELATAIAEKVGATKPECEVGIAPTFPALHEVGKTIEWSGVQLAAQNCHYENDGAFTGEVSTRMLAAAGCSYVILGHSERRQLFGETNEIVNRKVKKALAEGLRVILCVGETLDEREAGVTDKIVTAQVVEGLAD-VSDISTLVIAYEPVWAIGTGKTATKEQAQDVHASIRSTIEKLYGDSAARHLRIQYGGS 212
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.755e-37 Identity = 86/214 (40.19%), Postives = 127/214 (59.35%), Query Frame = 1 Query: 37 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 M R V GNWK NG K +++ + + +L +S++ + +QN ++ GAFTGE+SA ML + VI+GHSERR + E + + K A+A + GL I CVGETLE+R++G+T +V Q +A+ D V++++N ++AYEPVWAIGTGK A+P QAQ VH LR++ LA P+IA + R++YGGS Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQF-LAKDDPDIAQSLRLLYGGS 209
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.092e-36 Identity = 97/216 (44.91%), Postives = 115/216 (53.24%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVA--AQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK V GNWK N T E ++ + L EG F L + G +A AQNC + GAFTGE+SA M+ VI GHSERR E N V KV +ALS+GL+VI C GETLEQRE G T +VV AQ + + SNIV+AYEPVWAIGTGK AT QA+EVH +R + E A RI YGGS Sbjct: 2 RKKIVVGNWKMNKTVTESLVLAAEVTAALGEG------FTGCDVGIAPPFTALYEVGKLTGSRLALVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGS 211
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.427e-36 Identity = 92/212 (43.40%), Postives = 115/212 (54.25%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 RK V GNWK N T +E + LNE L V + V A+NC K GA+TGE+SAEM+ + VILGHSERR E + +KV AL+ GL I C+GE LE+REA EVVAAQ +++ +S I+LAYEPVWAIGTGK A+P QAQE+H +R + EIA T I+YGGS Sbjct: 2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKASGAYTGEVSAEMVASTGAKYVILGHSERRAYYGETVAILEEKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQMESVFSLSAEDFSKIILAYEPVWAIGTGKTASPEQAQEIHAFIRSIVADKYGKEIADNTSILYGGS 213
BLAST of FC875456 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU5 (Triosephosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.434e-36 Identity = 92/213 (43.19%), Postives = 123/213 (57.75%), Query Frame = 1 Query: 43 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKKG-GAFTGEISAEMLVNLEIPRVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGS 672 R+ V GNWK NGT V +++ Q ++ V AQ+C ++ G GA TGE+SA+ LV+L V++GHSERRL+L E +E V K A A + GLK + C+GETLE+REAG T+EVVA Q + D V ++ + V+AYEPVWAIG+G ATP QAQEVH +R LA + IA R++YGGS Sbjct: 2 RRPMVAGNWKMNGTRASVAELIESFRR-QALPAAVEIAVFPSFVHVSQVLDVVDGVQVSVGAQDCALQSGFGALTGEVSADQLVDLGCEWVLVGHSERRLVLGETDEVVSQKFAAAQAGGLKPVLCLGETLEEREAGRTLEVVARQLGQVLDDQGVEAFQSAVIAYEPVWAIGSGLTATPEQAQEVHAAIRD-QLARSDRRIAEGVRLLYGGS 212 The following BLAST results are available for this feature:
BLAST of FC875456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875456 ID=FC875456; Name=FC875456; organism=Citrus clementina; type=EST; length=677bpback to top |