FC875458

Overview
NameFC875458
Unique NameFC875458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10323 contig Ccv1_Contig10323:40..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.341e-56
Identity = 108/164 (65.85%), Postives = 128/164 (78.05%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAE-DSPLKATDFGLSVF 701
            LG+P ED++  Y  GRELGRGQFGITY+ T   + + FACKSI  RKLI   D EDVRRE+QIMH+L+G  NIVE+KGAYEDR SV+L+M+LC GGELFD+I  +GHYSE+AAA + R +V VV  CH MGV+HRDLKPENFL SS  E  S LKATDFG+SVF
Sbjct:   87 LGRPFEDIKEKYSLGRELGRGQFGITYICTEISSGKNFACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLKPENFLLSSKDEASSMLKATDFGVSVF 250          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.341e-56
Identity = 102/163 (62.58%), Postives = 128/163 (78.53%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            LGKP E++R  Y  G+ELGRGQFGITY      T   +ACKSI  RKL  + D++DV+RE+QIM +L+G  NIVE+KGAYEDR S++L+M+LC G ELFDRIIA+GHYSE+AAA + R ++ VV  CH MGV+HRDLKPENFL +S+ E++ LKATDFGLSVF
Sbjct:   91 LGKPFEEIRKLYTLGKELGRGQFGITYTCKENSTGNTYACKSILKRKLTRKQDIDDVKREIQIMQYLSGQENIVEIKGAYEDRQSIHLVMELCGGSELFDRIIAQGHYSEKAAAGVIRSVLNVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVF 253          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.287e-56
Identity = 104/164 (63.41%), Postives = 129/164 (78.66%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            +G    ++R+ Y  GR+LG+GQFG TYL T   T  ++ACKSIS RKLI+++DVEDVRRE+QIMHHL+GHRNIV +KGAYED   V+++M++C+GGELFDRII +GHYSER AA L + +V VV  CHS+GVMHRDLKPENFL  +   D  LKA DFGLSVFF
Sbjct:   83 MGHMTPNIRDLYTLGRKLGQGQFGTTYLCTENSTGAEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYVHIVMEICSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDNDFSLKAIDFGLSVFF 246          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.483e-55
Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+   D+R  YI GR+LG+GQFG TYL T   T  ++ACK+I  RKLI ++DVEDVRRE+QIMHHL+GH+N+V +K  YED  +V+++M+LCAGGELFDRI  KGHYSER AA L R +V++V  CHS+GVMHRDLKPENFL     +D  +KA DFGLSVFF
Sbjct:   68 LGRKTADLREHYIIGRKLGQGQFGTTYLCTEINTGCEYACKTIPKRKLITKEDVEDVRREIQIMHHLSGHKNVVAIKDVYEDGQAVHIVMELCAGGELFDRIQEKGHYSERKAAELIRIIVSIVAMCHSLGVMHRDLKPENFLLLDKDDDLSIKAIDFGLSVFF 231          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.483e-55
Identity = 103/164 (62.80%), Postives = 127/164 (77.44%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            L +  E+ +  Y  GR+LG+GQFG T+L   K T ++FACKSI+ RKL+  +DVEDVRRE+QIMHHL GH N++ +KGAYED  +V+L+M+ CAGGELFDRII +GHY+ER AA L R +V VV  CHS+GVMHRDLKPENFLF S  EDS LK  DFGLS+FF
Sbjct:  139 LQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFF 302          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.936e-55
Identity = 105/164 (64.02%), Postives = 127/164 (77.44%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG    ++R+ Y   R+LG+GQFG TYL T   T   +ACKSIS RKLI+++DVEDVRRE+QIMHHL GH+NIV +KGAYED   V+++M+LCAGGELFDRII +GHYSER AA L + +V VV  CHS+GVMHRDLKPENFL  +  +D  LKA DFGLSVFF
Sbjct:   74 LGHKTPNIRDLYTLSRKLGQGQFGTTYLCTDIATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 237          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.303e-55
Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            L +  E+ +  Y  GR+LG+GQFG T+L   K T  ++ACKSIS RKL+  +DVEDVRRE+QIMHHL GH N++ +KGAYED  +V+L+M+LC+GGELFDRII +GHY+ER AA L R +V V+  CHS+GVMHRDLKPENFLF S  EDS LK  DFGLS+FF
Sbjct:  175 LQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFF 338          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.634e-55
Identity = 105/163 (64.42%), Postives = 124/163 (76.07%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            LGKP ED+R  Y  GRELGRG  GITY+     T   +ACKSI  RKLI+    EDV+ E+QIM HL+G  N+VE+KG+YEDRHSV+L+M+LCAGGELFDRIIA+GHYSERAAA   + +V VV  CH  GV+HRDLKPENFLFSS  E++ LK TDFGLS F
Sbjct:   58 LGKPFEDIRKFYSLGRELGRGGLGITYMCKEIGTGNIYACKSILKRKLISELGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGGELFDRIIAQGHYSERAAAGTIKSIVDVVQICHLNGVIHRDLKPENFLFSSKEENAMLKVTDFGLSAF 220          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.634e-55
Identity = 98/164 (59.76%), Postives = 131/164 (79.88%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+  E++++ Y  GR+LG+GQFG T+L   K T ++FACK+I+ RKL   +DVEDVRRE+QIMHHL+GH N++++ GAYED  +V+++M++CAGGELFDRII +GHY+E+ AA L R +V V+  CHS+GVMHRDLKPENFLF S  E++ LK  DFGLSVFF
Sbjct:  123 LGRKTENLKDIYSVGRKLGQGQFGTTFLCVDKKTGKEFACKTIAKRKLTTPEDVEDVRREIQIMHHLSGHPNVIQIVGAYEDAVAVHVVMEICAGGELFDRIIQRGHYTEKKAAELARIIVGVIEACHSLGVMHRDLKPENFLFVSGDEEAALKTIDFGLSVFF 286          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.634e-55
Identity = 102/164 (62.20%), Postives = 128/164 (78.05%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG    ++R+ Y  GR+LG+GQFG TYL T   +   +ACKSI+ RKLI+++DVEDVRRE+QIMHHL GH+NIV +KGAYED   V+++M+LC GGELFDRII +GHY+ER AA+L + +V VV  CHS+GVMHRDLKPENFL  +  +D  LKA DFGLSVFF
Sbjct:   61 LGHKTPNIRDLYTLGRKLGQGQFGTTYLCTELSSGIDYACKSIAKRKLISKEDVEDVRREIQIMHHLAGHKNIVSIKGAYEDPLYVHIVMELCGGGELFDRIIQRGHYTERKAADLTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 224          
The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPKJ_ARATH1.341e-5665.85Calcium-dependent protein kinase 19 OS=Arabidopsis... [more]
CDPKF_ARATH1.341e-5662.58Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]
CDPK4_SOLTU2.287e-5663.41Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
CDPKB_ORYSJ1.483e-5562.20Calcium-dependent protein kinase isoform 11 OS=Ory... [more]
CDPK1_ARATH1.483e-5562.80Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPK6_ARATH1.936e-5564.02Calcium-dependent protein kinase 6 OS=Arabidopsis ... [more]
CDPK2_ARATH3.303e-5562.20Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDPKN_ARATH5.634e-5564.42Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
CDPKK_ARATH5.634e-5559.76Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK5_SOLTU5.634e-5562.20Calcium-dependent protein kinase 5 OS=Solanum tube... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31404B09EF CTVClemen1 Citrus clementina cDNA clone C31404B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bp
GCATTTGTCTTCCCGGTCTCTCTTGACTCGTGTTGACCAAAATGGGCAAC
TGTAACGGCCTACCCTCGTCTCAAACTCAACTCCACTCAACCACTGCCGA
TCCCGACACTGGGCCCGGCCACCACCCCAACGGCCTCAAAATAGATCCTC
CGGGTCCTCCTCGTCCTTCTTCCTCTGCCACGTCAGCCACCTCGTCATCC
GTTGGCCGTGTCCTCGGCAAACCCATGGAGGACGTCCGCAACACCTACAT
CTTCGGCCGCGAGCTCGGCCGCGGCCAGTTCGGCATCACCTACTTAGTAA
CTCACAAATACACCAAACAACAATTCGCCTGCAAATCCATCTCCTCTCGC
AAGCTCATAAACCGCGACGACGTCGAAGACGTCCGCCGTGAGGTCCAGAT
CATGCACCACCTAACCGGGCACAGGAATATTGTGGAGCTGAAGGGGGCGT
ATGAGGACAGGCACTCGGTGAATTTGATTATGGATTTGTGTGCGGGAGGG
GAGTTGTTTGATCGGATCATAGCCAAGGGGCATTATTCGGAGAGAGCCGC
TGCGAATTTGTGTCGACAGATGGTGACTGTGGTGCATTACTGTCATTCCA
TGGGTGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTATTCTCGAGT
TCCGCTGAAGATTCTCCTTTGAAGGCTACTGATTTCGGACTCTCTGTGTT
TTTCAG
back to top