FC875458

Overview
NameFC875458
Unique NameFC875458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10323 contig Ccv1_Contig10323:40..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.796e-54
Identity = 103/164 (62.80%), Postives = 126/164 (76.83%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG    ++R+ Y   R+LG+GQFG TYL T   +   +ACKSIS RKLI+++DVEDVRRE+QIMHHL GH +IV +KGAYED   V+++M+LCAGGELFDRII +GHYSER AA L + +V VV  CHS+GVMHRDLKPENFL  +  +D  LKA DFGLSVFF
Sbjct:   86 LGHKTPNIRDIYTLSRKLGQGQFGTTYLCTEIASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIVMELCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 249          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.769e-54
Identity = 100/164 (60.98%), Postives = 128/164 (78.05%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+    +R+ Y  G +LG+GQFG TY+     T +++ACKSI+ RKLI+++DVEDVRRE+QIMHHL G++NIV +KGAYED   V+++M+LC+GGELFDRII +GHYSER AA L + +V VV  CHS+GVMHRDLKPENFL  +  +D  LKA DFGLSVFF
Sbjct:   13 LGQKTPSIRDLYSLGHKLGQGQFGTTYMCKEISTGREYACKSITKRKLISKEDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELIKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFF 176          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.091e-53
Identity = 101/157 (64.33%), Postives = 122/157 (77.71%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            + + YI GRELGRG+FGITYL T + T +  ACKSIS RKL    D+EDVRREV IM  L  H N+V+LK +YED  +V+L+M+LC GGELFDRI+A+GHY+ERAAA + R +  VV  CHS GVMHRDLKPENFLF++  E+SPLKA DFGLSVFF
Sbjct:   59 ISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIAEVVMMCHSNGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFF 215          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.037e-53
Identity = 97/158 (61.39%), Postives = 126/158 (79.75%), Query Frame = 3
Query:  228 EDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            ++V + Y  G+ LG+GQFG T+L THK T Q+ ACKSI  RKL+ ++D +DV RE+QIMHHL+ + N+V ++ AYED  +V+L+M+LC GGELFDRI+ +GHYSER AA L + +V VV  CHS+GV+HRDLKPENFLFSSS ED+ LK+TDFGLSVF
Sbjct:   16 KNVEDNYFLGQVLGQGQFGTTFLCTHKQTGQKLACKSIPKRKLLCQEDYDDVLREIQIMHHLSEYPNVVRIESAYEDTKNVHLVMELCEGGELFDRIVKRGHYSEREAAKLIKTIVGVVEACHSLGVVHRDLKPENFLFSSSDEDASLKSTDFGLSVF 173          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.273e-53
Identity = 97/158 (61.39%), Postives = 120/158 (75.95%), Query Frame = 3
Query:  231 DVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            ++ + Y  GRELGRG+FG+TYL T K T   FACKSI  +KL    D+EDVRREV+IM H+  H N+V LK  YED H+V+L+M+LC GGELFDRI+A+GHY+ERAAA + + ++ VV  CH  GVMHRDLKPENFLF +  E +PLKA DFGLSVFF
Sbjct:   58 EIESKYTLGRELGRGEFGVTYLCTDKETDDVFACKSILKKKLRTAVDIEDVRREVEIMRHMPEHPNVVTLKETYEDEHAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIMEVVQVCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFF 215          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.273e-53
Identity = 95/157 (60.51%), Postives = 123/157 (78.34%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            +R+ Y+ G++LG+GQFG TYL T K T   +ACKSI  RKL+ R+D EDV RE+QIMHHL+ H N+V +KG YED   V+++M++C GGELFDRI++KGH+SER A  L + ++ VV  CHS+GVMHRDLKPENFLF S  +D+ LKATDFGLSVF+
Sbjct:   22 LRDHYLLGKKLGQGQFGTTYLCTEKSTSANYACKSIPKRKLVCREDYEDVWREIQIMHHLSEHPNVVRIKGTYEDSVFVHIVMEVCEGGELFDRIVSKGHFSEREAVKLIKTILGVVEACHSLGVMHRDLKPENFLFDSPKDDAKLKATDFGLSVFY 178          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.534e-52
Identity = 96/159 (60.38%), Postives = 124/159 (77.99%), Query Frame = 3
Query:  228 EDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            +++R  Y  GR+LG+GQFG T+  T + +  +FACKSI  RKL+ ++D EDV RE+QIMHHL+ H N+V ++G YED  +V+L+M+LC GGELFDRI+ KGHYSER AA L + +V VV  CHS+GVMHRDLKPENFLF +  ED+ LKATDFGLSVF+
Sbjct:   28 QNIREVYEVGRKLGQGQFGTTFECTRRASGGKFACKSIPKRKLLCKEDYEDVWREIQIMHHLSEHANVVRIEGTYEDSTAVHLVMELCEGGELFDRIVQKGHYSERQAARLIKTIVEVVEACHSLGVMHRDLKPENFLFDTIDEDAKLKATDFGLSVFY 186          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.830e-52
Identity = 94/157 (59.87%), Postives = 124/157 (78.98%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            +R+ Y+ G++LG+GQFG TYL T K +   +ACKSI  RKL+ R+D EDV RE+QIMHHL+ H N+V +KG YED   V+++M++C GGELFDRI++KG +SER AA L + ++ VV  CHS+GVMHRDLKPENFLF S ++D+ LKATDFGLSVF+
Sbjct:   21 LRDHYLLGKKLGQGQFGTTYLCTEKSSSANYACKSIPKRKLVCREDYEDVWREIQIMHHLSEHPNVVRIKGTYEDSVFVHIVMEVCEGGELFDRIVSKGCFSEREAAKLIKTILGVVEACHSLGVMHRDLKPENFLFDSPSDDAKLKATDFGLSVFY 177          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 9.945e-52
Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            + + YI GRELGRG+FGITYL T + T++  ACKSIS RKL    DVEDVRREV IM  L  H N+V+LK  YED  +V+L+M+LC GGELFDRI+A+GHY+ERAAA + R +  VV  CH  GVMHRDLKPENFLF++  E+S LKA DFGLSV F
Sbjct:   55 ISDKYILGRELGRGEFGITYLCTDRETREALACKSISKRKLRTAVDVEDVRREVTIMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYTERAAATVARTIAEVVRMCHVNGVMHRDLKPENFLFANKKENSALKAIDFGLSVLF 211          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.299e-51
Identity = 96/158 (60.76%), Postives = 122/158 (77.22%), Query Frame = 3
Query:  231 DVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            D+   Y  GRE+GRG+FGITYL T K T +++ACKSIS +KL    D+EDVRREV+IM H+  H N+V LK ++ED  +V+++M+LC GGELFDRI+A+GHY+ERAAA + + +V VV  CH  GVMHRDLKPENFLF++  E S LKA DFGLSVFF
Sbjct:   54 DISLQYDLGREVGRGEFGITYLCTDKETGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPKHPNVVSLKDSFEDDDAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQICHKQGVMHRDLKPENFLFANKKETSALKAIDFGLSVFF 211          
The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPK5_ARATH2.796e-5462.80Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]
CDPKQ_ARATH4.769e-5460.98Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPKA_ARATH3.091e-5364.33Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPKC_ARATH4.037e-5361.39Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CDPKW_ARATH5.273e-5361.39Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKB_ARATH5.273e-5360.51Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CDPK_SOYBN1.534e-5260.38Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPK4_ARATH5.830e-5259.87Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPKU_ARATH9.945e-5263.06Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPK7_ARATH1.299e-5160.76Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC31404B09EF CTVClemen1 Citrus clementina cDNA clone C31404B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bp
GCATTTGTCTTCCCGGTCTCTCTTGACTCGTGTTGACCAAAATGGGCAAC
TGTAACGGCCTACCCTCGTCTCAAACTCAACTCCACTCAACCACTGCCGA
TCCCGACACTGGGCCCGGCCACCACCCCAACGGCCTCAAAATAGATCCTC
CGGGTCCTCCTCGTCCTTCTTCCTCTGCCACGTCAGCCACCTCGTCATCC
GTTGGCCGTGTCCTCGGCAAACCCATGGAGGACGTCCGCAACACCTACAT
CTTCGGCCGCGAGCTCGGCCGCGGCCAGTTCGGCATCACCTACTTAGTAA
CTCACAAATACACCAAACAACAATTCGCCTGCAAATCCATCTCCTCTCGC
AAGCTCATAAACCGCGACGACGTCGAAGACGTCCGCCGTGAGGTCCAGAT
CATGCACCACCTAACCGGGCACAGGAATATTGTGGAGCTGAAGGGGGCGT
ATGAGGACAGGCACTCGGTGAATTTGATTATGGATTTGTGTGCGGGAGGG
GAGTTGTTTGATCGGATCATAGCCAAGGGGCATTATTCGGAGAGAGCCGC
TGCGAATTTGTGTCGACAGATGGTGACTGTGGTGCATTACTGTCATTCCA
TGGGTGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTATTCTCGAGT
TCCGCTGAAGATTCTCCTTTGAAGGCTACTGATTTCGGACTCTCTGTGTT
TTTCAG
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