FC875458

Overview
NameFC875458
Unique NameFC875458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10323 contig Ccv1_Contig10323:40..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKP_ARATH (Calcium-dependent protein kinase 25 OS=Arabidopsis thaliana GN=CPK25 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.779e-51
Identity = 93/156 (59.62%), Postives = 121/156 (77.56%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            ++  Y  G +LG GQFG T++   K T +++ACKSI  RKL N +DVEDVRRE++IM HL G  N++ +KGAYED  +V+++M+LC GGELFDRI+ +GHYSER AA+L + ++ VV  CHS+GVMHRDLKPENFLF +  EDSPLKA DFGLS+F
Sbjct:  128 LKEYYNLGSKLGHGQFGTTFVCVEKGTGEEYACKSIPKRKLENEEDVEDVRREIEIMKHLLGQPNVISIKGAYEDSVAVHMVMELCRGGELFDRIVERGHYSERKAAHLAKVILGVVQTCHSLGVMHRDLKPENFLFVNDDEDSPLKAIDFGLSMF 283          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.436e-50
Identity = 96/158 (60.76%), Postives = 121/158 (76.58%), Query Frame = 3
Query:  231 DVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            D+   Y  GRE+GRG+FGITYL T   T +++ACKSIS +KL    D+EDVRREV+IM H+  H NIV LK A+ED  +V+++M+LC GGELFDRI+A+GHY+ERAAA + + ++ VV  CH  GVMHRDLKPENFLF++  E S LKA DFGLSVFF
Sbjct:   52 DISLMYDLGREVGRGEFGITYLCTDIKTGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKETSALKAIDFGLSVFF 209          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 4.178e-50
Identity = 94/161 (58.39%), Postives = 122/161 (75.78%), Query Frame = 3
Query:  222 PMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            P E++ + Y+  RELGRG+FG+TYL   + ++   ACKSIS RKL    D+EDV+REV IM HL    +IV LK A ED ++V+L+M+LC GGELFDRI+A+GHY+ERAAA + + +V VV  CH  GV+HRDLKPENFLF++  E+SPLKA DFGLS+FF
Sbjct:   46 PKENIEDRYLLDRELGRGEFGVTYLCIERSSRDLLACKSISKRKLRTAVDIEDVKREVAIMKHLPKSSSIVTLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAGVTKTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFF 206          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.216e-49
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 3
Query:   42 MGNCNGLPSSQTQLHSTTADPDTGP-----GHHPNGLKIDXXXXXXXXXXXXXXXXXXXXXXLGKPM-EDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            MGNC G   S  Q           P     G+H +GLK+                       L +P   +++  Y  GRELGRG+FG+TYL T   T + FACKSI  +KL    D+EDV+REV+IM  +  H NIV LK  YED  +V+L+M+LC GGELFDRI+A+GHY+ERAAA++ + ++ VV  CH  GVMHRDLKPENFLF++  E + LKA DFGLSVFF
Sbjct:    1 MGNCCGTAGSLIQDKQKKGFKLPNPFSNEYGNHHDGLKL---------------------IVLKEPTGHEIKQKYKLGRELGRGEFGVTYLCTEIETGEIFACKSILKKKLKTSIDIEDVKREVEIMRQMPEHPNIVTLKETYEDDKAVHLVMELCEGGELFDRIVARGHYTERAAASVIKTIIEVVQMCHKHGVMHRDLKPENFLFANKKETASLKAIDFGLSVFF 206          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK1_ORYSJ (Calcium-dependent protein kinase isoform 1 OS=Oryza sativa subsp. japonica GN=SPK PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 6.670e-48
Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG    +VR  Y  GRELG+GQFG TYL T   T  Q+ACK+I    L    D+EDVRRE+QIMHHL+G +NIV +K  YED  +V+++M+LCAGGELF +I  +GHYSER AA L + +V ++  CHS GVMHRDLKPENFL   + ++  +KA DFGLSVFF
Sbjct:   62 LGYKTPNVRELYTLGRELGQGQFGKTYLCTEISTGCQYACKTILKSNLRCVSDIEDVRREIQIMHHLSGQKNIVTIKDTYEDEQAVHIVMELCAGGELFSKIQKRGHYSERKAAELIKIIVGIIETCHSHGVMHRDLKPENFLLLDADDEFSVKAIDFGLSVFF 225          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.258e-46
Identity = 91/165 (55.15%), Postives = 121/165 (73.33%), Query Frame = 3
Query:  213 LGKPMED-VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            L +P+ D +   Y  G+ELGRG+FG+T+      T+++FACK IS  KL    DVEDVRREV+IM  L  H NIV  K A+ED+ +V L+M++C GGELFDRI+++GHY+ERAAA++ + ++ VV  CH  GV+HRDLKPENFLFS+  E + LKA DFGLS+FF
Sbjct:   54 LPEPIGDGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKRISKEKLRTEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRIVSRGHYTERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSIFF 218          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKM_ARATH (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana GN=CPK22 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 2.803e-46
Identity = 89/167 (53.29%), Postives = 121/167 (72.46%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI--IAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            LGKP+ED++  Y FG ELG+G FG TYL     T + +ACKSI  R L + ++ E V+ E+QIM H++G  NIV++KG+YED +S++++M+LC GGELFD+I  + K H  YSE+ AA + R +V  V  CHS+ V+HRDLKPENFLFSS  E++ LKA DFG SV+
Sbjct:   25 LGKPLEDIKKHYSFGDELGKGNFGTTYLCKENSTGKSYACKSIPKRTLSSEEEKEAVKTEIQIMDHVSGQPNIVQIKGSYEDNNSIHIVMELCGGGELFDKIDALVKSHSYYSEKDAAGIFRSIVNAVKICHSLDVVHRDLKPENFLFSSKDENAMLKAIDFGCSVY 191          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 2.455e-42
Identity = 86/167 (51.50%), Postives = 114/167 (68.26%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            L KP+ D+   YI G ELGRG FG+T     K T + FACK+I   KL + +  EDV+RE++IM  L+G  NIVE K AYED+ SV+++M+ C GGEL+D+I+A       YSE+ AA + R +V VV  CH MGVMHRDLKPENFL +S+ +++ +K  DFG SVF
Sbjct:   17 LEKPLVDITKIYILGEELGRGNFGLTRKCVEKSTGKTFACKTILKTKLKDEECEEDVKREIRIMKQLSGEPNIVEFKNAYEDKDSVHIVMEYCGGGELYDKILALYDVGKSYSEKEAAGIIRSIVNVVKNCHYMGVMHRDLKPENFLLTSNDDNATVKVIDFGCSVF 183          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKG_ARATH (Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.078e-41
Identity = 86/160 (53.75%), Postives = 110/160 (68.75%), Query Frame = 3
Query:  228 EDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            +D  + Y  G+ LG GQFG TY+ T K T  + A K I   K+     VEDV+REV+I+  LTGH N+V    A+ED++SV ++M+LC GGEL DRI+A+    YSER AA + RQM+ V   CH  G++HRD+KPENFLF S+ EDSPLKATDFGLS F
Sbjct:  102 KDFDHRYTIGKLLGHGQFGYTYVATDKKTGDRVAVKKIDKAKMTIPIAVEDVKREVKILQALTGHENVVRFYNAFEDKNSVYIVMELCEGGELLDRILARKDSRYSERDAAVVVRQMLKVAAECHLRGLVHRDMKPENFLFKSTEEDSPLKATDFGLSDF 261          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40
Identity = 87/167 (52.10%), Postives = 112/167 (67.07%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG----HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF 701
            L KP  D+   YI G ELG+GQFGIT     K + + +ACK+I    L +R+D E V+RE++IM HL+G  NIVE K AYEDR SV+++M+ C GGELF +I A       YSE+ A  + R +V VV  CH MGVM RDLKPENFL SS+ +++ +KA DFG SVF
Sbjct:   17 LEKPFVDIGKVYILGDELGQGQFGITRKCVEKTSGKTYACKTILKTNLKSREDEEAVKREIRIMKHLSGEPNIVEFKKAYEDRDSVHIVMEYCGGGELFKKIEALSKDGKSYSEKEAVEIIRPIVNVVKNCHYMGVMLRDLKPENFLLSSTDKNATVKAIDFGCSVF 183          
The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPKP_ARATH3.779e-5159.62Calcium-dependent protein kinase 25 OS=Arabidopsis... [more]
CDPK8_ARATH1.436e-5060.76Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPKD_ARATH4.178e-5058.39Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKE_ARATH1.216e-4947.58Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPK1_ORYSJ6.670e-4856.71Calcium-dependent protein kinase isoform 1 OS=Oryz... [more]
CDPKO_ARATH1.258e-4655.15Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPKM_ARATH2.803e-4653.29Calcium-dependent protein kinase 22 OS=Arabidopsis... [more]
CDPKR_ARATH2.455e-4251.50Calcium-dependent protein kinase 27 OS=Arabidopsis... [more]
CDPKG_ARATH2.078e-4153.75Calcium-dependent protein kinase 16 OS=Arabidopsis... [more]
CDPKV_ARATH1.347e-4052.10Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31404B09EF CTVClemen1 Citrus clementina cDNA clone C31404B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bp
GCATTTGTCTTCCCGGTCTCTCTTGACTCGTGTTGACCAAAATGGGCAAC
TGTAACGGCCTACCCTCGTCTCAAACTCAACTCCACTCAACCACTGCCGA
TCCCGACACTGGGCCCGGCCACCACCCCAACGGCCTCAAAATAGATCCTC
CGGGTCCTCCTCGTCCTTCTTCCTCTGCCACGTCAGCCACCTCGTCATCC
GTTGGCCGTGTCCTCGGCAAACCCATGGAGGACGTCCGCAACACCTACAT
CTTCGGCCGCGAGCTCGGCCGCGGCCAGTTCGGCATCACCTACTTAGTAA
CTCACAAATACACCAAACAACAATTCGCCTGCAAATCCATCTCCTCTCGC
AAGCTCATAAACCGCGACGACGTCGAAGACGTCCGCCGTGAGGTCCAGAT
CATGCACCACCTAACCGGGCACAGGAATATTGTGGAGCTGAAGGGGGCGT
ATGAGGACAGGCACTCGGTGAATTTGATTATGGATTTGTGTGCGGGAGGG
GAGTTGTTTGATCGGATCATAGCCAAGGGGCATTATTCGGAGAGAGCCGC
TGCGAATTTGTGTCGACAGATGGTGACTGTGGTGCATTACTGTCATTCCA
TGGGTGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTATTCTCGAGT
TCCGCTGAAGATTCTCCTTTGAAGGCTACTGATTTCGGACTCTCTGTGTT
TTTCAG
back to top