FC875458

Overview
NameFC875458
Unique NameFC875458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KS6A1_CAEEL (Putative ribosomal protein S6 kinase alpha-1 OS=Caenorhabditis elegans GN=rskn-1 PE=1 SV=4)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  261 ELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHY-SERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS-SSAEDSPLKATDFGLS 695
            ++G G   + +    K T++++A K +          V D   EV I+   + H+ +V+L   YED  ++ +I +LC GGEL D+++ K    SE+  A +   ++  V Y HS  V HRDL   N LF+    + S L+  DFG +
Sbjct:  459 KIGNGAHSVVHKCQMKATRRKYAVKIVKKA-------VFDATEEVDILLRHSHHQFVVKLFDVYEDETAIYMIEELCEGGELLDKLVNKKSLGSEKEVAAIMANLLNAVQYLHSQQVAHRDLTAANILFALKDGDPSSLRIVDFGFA 598          

HSP 2 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 48/147 (32.65%), Postives = 78/147 (53.06%), Query Frame = 3
Query:  264 LGRGQFGITYLVTHKYTKQQ---FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            LG+G FG  +LV     +     +A K +    L  RD  +  + E  I+ H++ H  IV+L  A++    + LI+D   GG+LF R+  +  ++E        ++   + + HS+G+++RDLKPEN L  +   D  +K TDFGLS
Sbjct:  110 LGQGSFGKVFLVRKVRGRDSGHVYAMKVLKKATLKVRDR-QRTKLERNILAHIS-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEDDVKFYLAELTLALEHLHSLGIVYRDLKPENILLDA---DGHIKVTDFGLS 251          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CAMKV_MOUSE (CaM kinase-like vesicle-associated protein OS=Mus musculus GN=Camkv PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  231 DVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            +V + Y  G+ +   +F   +    K T +   CK    R    R   +  + E+ I+  +  H NI++L   +  R    + ++L  G E+FD I+ +G+YSER  +N+ RQ++  V Y HS+ ++HR+LK EN ++ +  ++S +  +DF L+
Sbjct:   19 EVTDRYDLGQVIKTEEFCEIFRAKDKTTGKLHTCKKFQKRD--GRKVRKAAKNEIGILK-MVKHPNILQLVDVFVTRKEYFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYYNRLKNSKIVISDFHLA 170          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CAMKV_HUMAN (CaM kinase-like vesicle-associated protein OS=Homo sapiens GN=CAMKV PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 45/155 (29.03%), Postives = 83/155 (53.55%), Query Frame = 3
Query:  231 DVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            +V + Y  G+ +   +F   +    K T +   CK    R    R   +  + E+ I+  +  H NI++L   +  R    + ++L  G E+FD I+ +G+YSER  +N+ RQ++  V Y HS+ ++HR+LK EN ++ +  ++S +  +DF L+
Sbjct:   19 EVTDRYDLGQVIKTEEFCEIFRAKDKTTGKLHTCKKFQKRD--GRKVRKAAKNEIGILK-MVKHPNILQLVDVFVTRKEYFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLKLENLVYYNRLKNSKIVISDFHLA 170          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: ULK2_MOUSE (Serine/threonine-protein kinase ULK2 OS=Mus musculus GN=Ulk2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 3
Query:  264 LGRGQFGITYLVTHKY-TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFS------SSAEDSPLKATDFGLS 695
            +G G F + +   H+  T  + A KSI+ + L     +  + +E++I+  L  H NIV L    E  +SV L+M+ C GG+L D + AKG  SE        Q+   +   HS G++HRDLKP+N L S      S+     +K  DFG +
Sbjct:   15 VGHGAFAVVFRGRHRQKTDWEVAIKSINKKNLSKSQIL--LGKEIKILKELQ-HENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSEDTIRVFLHQIAAAMRILHSKGIIHRDLKPQNILLSYANRRKSNVSGIRIKIADFGFA 162          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: SMKW_MOUSE (Sperm motility kinase W OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 3
Query:  228 EDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698
            +DV + Y     LG G FG   L  H  TK   A K +     +++ ++  +R E+  +  L  H NI+ L         +N++ +   GG LFD I   G   E  A  +  Q+V+ V YCH+  ++H+D+K +N L     E+  +K  DFGL++
Sbjct:    8 KDVGSQYKVLFTLGHGSFGTVKLACHLKTKALVAIKMVE----LSKKNIRGIRAEIATLEKLQ-HPNIICLFQVLVTSKHINIVTEYIPGGNLFDIIKEDGPMHEEEARRIFGQVVSAVKYCHNQDIVHQDIKAQNIL---RDEEGNVKIIDFGLAI 156          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: SMK2A_MOUSE (Sperm motility kinase 2A OS=Mus musculus GN=Smok2a PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 48/158 (30.38%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  225 MEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698
            ME+    Y     +G G      L  H+ T    A K I  R+       + +  E +++  +  H NI+ L    E +  V LIM+LC G  L+  I   G+  E  A  L +Q+++ ++YC + G++HRDLKP+N +     +D  +K  DFGL +
Sbjct:   21 MENFHAQYEMLGTIGHGGSTKVKLARHRLTGTHVAVKMIPKREYW----CKPLMSEAELLM-MADHPNIISLLQVIETKKKVYLIMELCEGKSLYQHIRNAGYLQEDEARALFKQLLSAINYCRNQGIVHRDLKPDNIMVE---KDGRVKIIDFGLGI 170          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: PLK4_XENTR (Serine/threonine-protein kinase PLK4 OS=Xenopus tropicalis GN=plk4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 54/146 (36.99%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  264 LGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA--KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            LG+G F   Y      T    A K I  + +     V+ VR EV+I H    H +I+EL   +ED + V LI+++C  GE+ +R +   K  +SE  A +   Q+VT + Y HS G++HRDL   N L SS   D  +K  DFGL+
Sbjct:   18 LGKGSFACVYRAQSINTGIDVAIKMIDKKAMQKVGMVQRVRNEVEI-HCQLKHPSILELYNYFEDSNYVYLILEMCHNGEM-NRFLKNRKKPFSEDEARHFMHQIVTGMLYLHSHGILHRDLTLSNLLLSS---DMNIKIADFGLA 158          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: PLK4_BOVIN (Serine/threonine-protein kinase PLK4 OS=Bos taurus GN=PLK4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 52/163 (31.90%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            +G+ +ED R     G  LG+G F   Y     +T  + A K I  + +     V+ V+ EV+I H    H +I+EL   +ED + V L++++C  GE+ +R +      +SE  A +   Q++T + Y HS G++HRDL   N L + +     +K  DFGL+
Sbjct:    5 IGEKIEDFR----VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI-HCQLKHPSILELYNYFEDNNYVYLVLEMCHNGEM-NRYLKNRRKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLA 158          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: MAST3_MOUSE (Microtubule-associated serine/threonine-protein kinase 3 OS=Mus musculus GN=Mast3 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  264 LGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN--IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            +  G +G  YLV H+ T+Q+FA K I+ + LI R+ ++ V  E  I   LT   N  +V +  ++E R  + ++M+   GG+    +   G      A     + V  + Y H+ G++HRDLKP+N L +S      +K TDFGLS
Sbjct:  395 ISNGAYGAVYLVRHRDTRQRFAIKKINKQNLILRNQIQQVFVERDI---LTFAENPFVVGMFCSFETRRHLCMVMEYVEGGDCATLLKNMGPLPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSLGH---IKLTDFGLS 534          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: M4K2_MOUSE (Mitogen-activated protein kinase kinase kinase kinase 2 OS=Mus musculus GN=Map4k2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14
Identity = 47/157 (29.94%), Postives = 79/157 (50.32%), Query Frame = 3
Query:  225 MEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            ++D R+ +   + +G G +G  Y      T +  A K +   KL   DD+  +++E+ I+     H N+V   G+Y     + + M+ C GG L +   A G   ER  A +CR+ +  +H+ HS G +HRD+K  N L +   +   +K  DFG+S
Sbjct:    9 LQDPRDRFELLQRVGAGTYGDVYKARDTVTSELAAVKIV---KLDPGDDISSLQQEITILRECR-HPNVVAYIGSYLRNDRLWICMEFCGGGSLQEIYHATGPLEERQIAYVCREALKGLHHLHSQGKIHRDIKGANLLLTLQGD---VKLADFGVS 158          
The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KS6A1_CAEEL2.829e-1431.29Putative ribosomal protein S6 kinase alpha-1 OS=Ca... [more]
CAMKV_MOUSE2.829e-1429.03CaM kinase-like vesicle-associated protein OS=Mus ... [more]
CAMKV_HUMAN2.829e-1429.03CaM kinase-like vesicle-associated protein OS=Homo... [more]
ULK2_MOUSE3.694e-1433.77Serine/threonine-protein kinase ULK2 OS=Mus muscul... [more]
SMKW_MOUSE3.694e-1430.57Sperm motility kinase W OS=Mus musculus PE=2 SV=1[more]
SMK2A_MOUSE3.694e-1430.38Sperm motility kinase 2A OS=Mus musculus GN=Smok2a... [more]
PLK4_XENTR3.694e-1436.99Serine/threonine-protein kinase PLK4 OS=Xenopus tr... [more]
PLK4_BOVIN3.694e-1431.90Serine/threonine-protein kinase PLK4 OS=Bos taurus... [more]
MAST3_MOUSE3.694e-1433.56Microtubule-associated serine/threonine-protein ki... [more]
M4K2_MOUSE3.694e-1429.94Mitogen-activated protein kinase kinase kinase kin... [more]

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Properties
Property NameValue
Genbank descriptionC31404B09EF CTVClemen1 Citrus clementina cDNA clone C31404B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bp
GCATTTGTCTTCCCGGTCTCTCTTGACTCGTGTTGACCAAAATGGGCAAC
TGTAACGGCCTACCCTCGTCTCAAACTCAACTCCACTCAACCACTGCCGA
TCCCGACACTGGGCCCGGCCACCACCCCAACGGCCTCAAAATAGATCCTC
CGGGTCCTCCTCGTCCTTCTTCCTCTGCCACGTCAGCCACCTCGTCATCC
GTTGGCCGTGTCCTCGGCAAACCCATGGAGGACGTCCGCAACACCTACAT
CTTCGGCCGCGAGCTCGGCCGCGGCCAGTTCGGCATCACCTACTTAGTAA
CTCACAAATACACCAAACAACAATTCGCCTGCAAATCCATCTCCTCTCGC
AAGCTCATAAACCGCGACGACGTCGAAGACGTCCGCCGTGAGGTCCAGAT
CATGCACCACCTAACCGGGCACAGGAATATTGTGGAGCTGAAGGGGGCGT
ATGAGGACAGGCACTCGGTGAATTTGATTATGGATTTGTGTGCGGGAGGG
GAGTTGTTTGATCGGATCATAGCCAAGGGGCATTATTCGGAGAGAGCCGC
TGCGAATTTGTGTCGACAGATGGTGACTGTGGTGCATTACTGTCATTCCA
TGGGTGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTATTCTCGAGT
TCCGCTGAAGATTCTCCTTTGAAGGCTACTGATTTCGGACTCTCTGTGTT
TTTCAG
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