FC875458

Overview
NameFC875458
Unique NameFC875458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAYO (Calcium-dependent protein kinase 3 OS=Plasmodium yoelii yoelii GN=CPK3 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.545e-28
Identity = 64/147 (43.54%), Postives = 93/147 (63.27%), Query Frame = 3
Query:  264 LGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+G +G  Y  T K  K Q A K +S +KL N   +   R+E+ IM +L  H N+++L   +ED   + LIMDLC GGELFD+II KG + E  A+ + +Q+ +V++Y H   + HRD+KPENFLF   + +S +K  DFGL+ +F
Sbjct:  118 LGKGTYGCVYKATDKLLKIQRAVKVVSKKKLKN---IPRFRQEIDIMKNLD-HPNVIKLLETFEDEEQIYLIMDLCTGGELFDKIIKKGSFVEMYASFIMKQIFSVLNYLHIRNICHRDIKPENFLFYDKSTESLIKIIDFGLAAYF 260          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC4_RAT (Calcium/calmodulin-dependent protein kinase type IV OS=Rattus norvegicus GN=Camk4 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 65/145 (44.83%), Postives = 96/145 (66.21%), Query Frame = 3
Query:  261 ELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            ELGRG   I Y    K T++ +A K +  +K +   D + VR E+ ++  L+ H NI++LK  +E    ++L+++L  GGELFDRI+ KG+YSER AA+  +Q++  V Y H  G++HRDLKPEN L+++ A D+PLK  DFGLS
Sbjct:   47 ELGRGATSIVYRCKQKGTQKPYALKVL--KKTV---DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 185          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC4_HUMAN (Calcium/calmodulin-dependent protein kinase type IV OS=Homo sapiens GN=CAMK4 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 65/145 (44.83%), Postives = 96/145 (66.21%), Query Frame = 3
Query:  261 ELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            ELGRG   I Y    K T++ +A K +  +K +   D + VR E+ ++  L+ H NI++LK  +E    ++L+++L  GGELFDRI+ KG+YSER AA+  +Q++  V Y H  G++HRDLKPEN L+++ A D+PLK  DFGLS
Sbjct:   51 ELGRGATSIVYRCKQKGTQKPYALKVL--KKTV---DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 189          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1A_RAT (Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 68/159 (42.77%), Postives = 94/159 (59.12%), Query Frame = 3
Query:  219 KPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            K  ED+R+ Y F   LG G F    L   K T++  A K I+ + L  ++    +  E+ ++H +  H NIV L   YE    + LIM L +GGELFDRI+ KG Y+ER A+ L  Q++  V Y H +G++HRDLKPEN L+ S  EDS +  +DFGLS
Sbjct:   11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1A_MOUSE (Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 68/159 (42.77%), Postives = 94/159 (59.12%), Query Frame = 3
Query:  219 KPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            K  ED+R+ Y F   LG G F    L   K T++  A K I+ + L  ++    +  E+ ++H +  H NIV L   YE    + LIM L +GGELFDRI+ KG Y+ER A+ L  Q++  V Y H +G++HRDLKPEN L+ S  EDS +  +DFGLS
Sbjct:   11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAFK (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            + + YI   +LG+G +G  Y    K T Q +A K     +L N   +    +E++IM  L  H NIV+L   YE+ + + LIM+LC+G ELFD II  G ++E+ AA + +Q+ + + Y HS+ ++HRDLKPENFLF S  +DS LK  DFGLS
Sbjct:   68 LEDKYIIDEKLGQGTYGCVYKGIDKVTNQLYAIKEEKKDRLKN---INRFFQEIEIMKKLD-HPNIVKLYETYENDNYIYLIMELCSGRELFDSIIENGSFTEKNAATIMKQIFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLS 217          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK2_PLAF7 (Calcium-dependent protein kinase 2 OS=Plasmodium falciparum (isolate 3D7) GN=CPK2 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-27
Identity = 66/154 (42.86%), Postives = 95/154 (61.69%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            + + YI   +LG+G +G  Y    K T Q +A K     +L N   +    +E++IM  L  H NIV+L   YE+ + + LIM+LC+G ELFD II  G ++E+ AA + +Q+ + + Y HS+ ++HRDLKPENFLF S  +DS LK  DFGLS
Sbjct:   68 LEDKYIIDEKLGQGTYGCVYKGIDKVTNQLYAIKEEKKDRLKN---INRFFQEIEIMKKLD-HPNIVKLYETYENDNYIYLIMELCSGRELFDSIIENGSFTEKNAATIMKQIFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLS 217          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1A_HUMAN (Calcium/calmodulin-dependent protein kinase type 1 OS=Homo sapiens GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.708e-27
Identity = 68/159 (42.77%), Postives = 93/159 (58.49%), Query Frame = 3
Query:  219 KPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            K  ED+R+ Y F   LG G F    L   K T++  A K I+   L  ++    +  E+ ++H +  H NIV L   YE    + LIM L +GGELFDRI+ KG Y+ER A+ L  Q++  V Y H +G++HRDLKPEN L+ S  EDS +  +DFGLS
Sbjct:   11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC4_MOUSE (Calcium/calmodulin-dependent protein kinase type IV OS=Mus musculus GN=Camk4 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27
Identity = 64/145 (44.14%), Postives = 95/145 (65.52%), Query Frame = 3
Query:  261 ELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            ELGRG   I Y    K T++ +A K +  +K +   D + VR E+ ++  L+ H NI++LK  +E    ++L+++L  GGELFDRI+ KG+YSER A +  +Q++  V Y H  G++HRDLKPEN L+++ A D+PLK  DFGLS
Sbjct:   47 ELGRGATSIVYRCKQKGTQKPYALKVL--KKTV---DKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDARDAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 185          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAF7 (Calcium-dependent protein kinase 3 OS=Plasmodium falciparum (isolate 3D7) GN=CPK3 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26
Identity = 61/147 (41.50%), Postives = 92/147 (62.59%), Query Frame = 3
Query:  264 LGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG+G +G  Y  T K  K   A K +S +KL N   +   R+E+ IM +L  H N+V+L   +ED + + L+M+LC GGELFD+I+ KG + E  A+ + +Q+ +V++Y H   + HRD+KPENFLF     +S +K  DFGL+ +F
Sbjct:  124 LGKGTYGCVYKATDKLLKISRAVKVVSKKKLKN---IPRFRQEIDIMKNLD-HPNVVKLLETFEDSNQIYLVMELCTGGELFDKIVKKGCFVETFASFIMKQIFSVLNYLHIRNICHRDIKPENFLFYDMTPESLIKIIDFGLASYF 266          
The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDPK3_PLAYO1.545e-2843.54Calcium-dependent protein kinase 3 OS=Plasmodium y... [more]
KCC4_RAT1.001e-2744.83Calcium/calmodulin-dependent protein kinase type I... [more]
KCC4_HUMAN1.001e-2744.83Calcium/calmodulin-dependent protein kinase type I... [more]
KCC1A_RAT1.001e-2742.77Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1A_MOUSE1.001e-2742.77Calcium/calmodulin-dependent protein kinase type 1... [more]
CDPK2_PLAFK1.001e-2742.86Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
CDPK2_PLAF71.001e-2742.86Calcium-dependent protein kinase 2 OS=Plasmodium f... [more]
KCC1A_HUMAN1.708e-2742.77Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC4_MOUSE3.805e-2744.14Calcium/calmodulin-dependent protein kinase type I... [more]
CDPK3_PLAF71.107e-2641.50Calcium-dependent protein kinase 3 OS=Plasmodium f... [more]

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Properties
Property NameValue
Genbank descriptionC31404B09EF CTVClemen1 Citrus clementina cDNA clone C31404B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bp
GCATTTGTCTTCCCGGTCTCTCTTGACTCGTGTTGACCAAAATGGGCAAC
TGTAACGGCCTACCCTCGTCTCAAACTCAACTCCACTCAACCACTGCCGA
TCCCGACACTGGGCCCGGCCACCACCCCAACGGCCTCAAAATAGATCCTC
CGGGTCCTCCTCGTCCTTCTTCCTCTGCCACGTCAGCCACCTCGTCATCC
GTTGGCCGTGTCCTCGGCAAACCCATGGAGGACGTCCGCAACACCTACAT
CTTCGGCCGCGAGCTCGGCCGCGGCCAGTTCGGCATCACCTACTTAGTAA
CTCACAAATACACCAAACAACAATTCGCCTGCAAATCCATCTCCTCTCGC
AAGCTCATAAACCGCGACGACGTCGAAGACGTCCGCCGTGAGGTCCAGAT
CATGCACCACCTAACCGGGCACAGGAATATTGTGGAGCTGAAGGGGGCGT
ATGAGGACAGGCACTCGGTGAATTTGATTATGGATTTGTGTGCGGGAGGG
GAGTTGTTTGATCGGATCATAGCCAAGGGGCATTATTCGGAGAGAGCCGC
TGCGAATTTGTGTCGACAGATGGTGACTGTGGTGCATTACTGTCATTCCA
TGGGTGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTATTCTCGAGT
TCCGCTGAAGATTCTCCTTTGAAGGCTACTGATTTCGGACTCTCTGTGTT
TTTCAG
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