FC875458

Overview
NameFC875458
Unique NameFC875458
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10323 contig Ccv1_Contig10323:40..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: MYLKC_DICDI (Probable myosin light chain kinase DDB_G0282429 OS=Dictyostelium discoideum GN=DDB_G0282429 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 63/157 (40.13%), Postives = 97/157 (61.78%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            +R  YI G E+GRG F I    T + T  + A KSI++R + N+     + RE++IM  +  H NI++L   YE    ++L+++L  GGELFD+I+ +G YSE+ A+ + RQ+V+ V + H+ G+ HRDLKP+N L  +  E   ++  DFGLS  F
Sbjct:   34 LRLNYILGNEIGRGAFSIVREATSRATGTKVAIKSINTRFIKNKL----LMREIEIMKKVGDHPNILKLYEVYETTKHLHLVLELVTGGELFDKIVQRGEYSEQDASKIVRQIVSAVGHLHANGIAHRDLKPQN-LLCAGEEGDDIRVADFGLSKIF 185          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1G_RAT (Calcium/calmodulin-dependent protein kinase type 1G OS=Rattus norvegicus GN=Camk1g PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 62/159 (38.99%), Postives = 93/159 (58.49%), Query Frame = 3
Query:  219 KPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            K   ++R T+IF   LG G F   +LV  + T + FA K I          +E+   E+ ++  +  H NIV L+  YE      L+M L +GGELFDRI+ +G Y+E+ A+ + +Q+++ V Y H  G++HRDLKPEN L+ +  E+S +  TDFGLS
Sbjct:   14 KQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSSLEN---EIAVLKRIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 168          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1G_MOUSE (Calcium/calmodulin-dependent protein kinase type 1G OS=Mus musculus GN=Camk1g PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 62/159 (38.99%), Postives = 93/159 (58.49%), Query Frame = 3
Query:  219 KPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            K   ++R T+IF   LG G F   +LV  + T + FA K I          +E+   E+ ++  +  H NIV L+  YE      L+M L +GGELFDRI+ +G Y+E+ A+ + +Q+++ V Y H  G++HRDLKPEN L+ +  E+S +  TDFGLS
Sbjct:   14 KQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSSLEN---EIAVLKRIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 168          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1G_HUMAN (Calcium/calmodulin-dependent protein kinase type 1G OS=Homo sapiens GN=CAMK1G PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.599e-25
Identity = 62/159 (38.99%), Postives = 93/159 (58.49%), Query Frame = 3
Query:  219 KPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            K   ++R T+IF   LG G F   +LV  + T + FA K I          +E+   E+ ++  +  H NIV L+  YE      L+M L +GGELFDRI+ +G Y+E+ A+ + +Q+++ V Y H  G++HRDLKPEN L+ +  E+S +  TDFGLS
Sbjct:   14 KQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 168          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KS6A5_CHICK (Ribosomal protein S6 kinase alpha-5 OS=Gallus gallus GN=RPS6KA5 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.562e-25
Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3
Query:  258 RELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            + LG G F I     HK T Q++A K IS R   N       +RE+  +    GH N+V+L   Y D+    L+M+L  GGEL +RI  K H+SE  A+++ R++V+ V + H +GV+HRDLKPEN LF+   ++S +K  DFG +
Sbjct:  420 KPLGEGSFSICRKCLHKKTSQEYAVKIISKRMEAN------TQREITALKLCEGHPNVVKLHEVYHDQLHTFLVMELLKGGELLERIQKKQHFSETEASHIMRRLVSAVSHMHDVGVVHRDLKPENLLFTDETDNSEIKIIDFGFA 559          

HSP 2 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 46/152 (30.26%), Postives = 75/152 (49.34%), Query Frame = 3
Query:  264 LGRGQFGITYLVT----HKYTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 704
            LG G +G  +LV     H   K  +A K +    ++ +    E  R E Q++ H+     +V L  A++    ++LI+D   GGELF  +  +  +SE        ++V  + + H +G+++RD+K EN L  S   D  +  TDFGLS  F
Sbjct:   45 LGTGAYGKVFLVRKVSGHDAGKL-YAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFSENEVQIYIGEIVLALEHLHKLGIIYRDIKLENILLDS---DGHVVLTDFGLSKEF 192          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1B_RAT (Calcium/calmodulin-dependent protein kinase type 1B OS=Rattus norvegicus GN=Pnck PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 61/161 (37.89%), Postives = 95/161 (59.01%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            L K  ED+ + Y    +LG G F    L   + +    A K I  + L  ++ +  V  E+ ++  ++ H NIV L+  +E    + L M+L  GGELFDRI+ +G Y+E+ A++L  Q++  V Y HS+G++HRDLKPEN L+++  EDS +  +DFGLS
Sbjct:    4 LKKQTEDISSVYEIREKLGSGAFSEVMLAQERGSAHLVALKCIPKKALRGKEAL--VENEIAVLRRIS-HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLS 161          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1B_MOUSE (Calcium/calmodulin-dependent protein kinase type 1B OS=Mus musculus GN=Pnck PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 61/161 (37.89%), Postives = 95/161 (59.01%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            L K  ED+ + Y    +LG G F    L   + +    A K I  + L  ++ +  V  E+ ++  ++ H NIV L+  +E    + L M+L  GGELFDRI+ +G Y+E+ A++L  Q++  V Y HS+G++HRDLKPEN L+++  EDS +  +DFGLS
Sbjct:    4 LKKQTEDISSVYEIREKLGSGAFSEVMLAQERGSAHLVALKCIPKKALRGKEAL--VENEIAVLRRIS-HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLS 161          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2A_DROME (Calcium/calmodulin-dependent protein kinase type II alpha chain OS=Drosophila melanogaster GN=CaMKII PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24
Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 3
Query:  240 NTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698
            + Y    ELG+G F I      K T  +FA K I+++KL  RD  + + RE +I   L  H NIV L  + ++ +   L+ DL  GGELF+ I+A+  YSE  A++  +Q++  V++CH  GV+HRDLKPEN L +S A+ + +K  DFGL++
Sbjct:   12 DNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTARD-FQKLEREARICRKLH-HPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHQNGVVHRDLKPENLLLASKAKGAAVKLADFGLAI 162          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC1B_HUMAN (Calcium/calmodulin-dependent protein kinase type 1B OS=Homo sapiens GN=PNCK PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.036e-24
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 3
Query:  213 LGKPMEDVRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            L K  ED+ + Y     LG G F    L   + +    A K I  + L  ++ +  V  E+ ++  ++ H NIV L+  +E    + L M+L  GGELFDRI+ +G Y+E+ A++L  Q++  V Y HS+G++HRDLKPEN L+++  EDS +  +DFGLS
Sbjct:    4 LKKHTEDISSVYEIRERLGSGAFSEVVLAQERGSAHLVALKCIPKKALRGKEAL--VENEIAVLRRIS-HPNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPENLLYATPFEDSKIMVSDFGLS 161          
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24
Identity = 62/154 (40.26%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  234 VRNTYIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 695
            ++  Y  GR LG G FG  ++     T +  A K ++  K++    +E ++RE+ +M  ++ H NIVEL      R  + L ++L  GGELF RI+  G   E AA +  RQ+V+ V +CHS GV HRDLKPEN L     E   LK  DFGLS
Sbjct:   19 LQGRYEMGRVLGHGNFGRVHVARDLRTGRSVAVKVVAKEKVVRAGMMEQIKREIAVMKRVS-HPNIVELHEVMATRSKIYLALELVRGGELFGRIVRLGRVREDAARHYFRQLVSAVDFCHSRGVYHRDLKPENLLLD---EAGNLKVVDFGLS 168          
The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MYLKC_DICDI1.446e-2640.13Probable myosin light chain kinase DDB_G0282429 OS... [more]
KCC1G_RAT1.224e-2538.99Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1G_MOUSE1.224e-2538.99Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1G_HUMAN1.599e-2538.99Calcium/calmodulin-dependent protein kinase type 1... [more]
KS6A5_CHICK3.562e-2540.41Ribosomal protein S6 kinase alpha-5 OS=Gallus gall... [more]
KCC1B_RAT6.075e-2537.89Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC1B_MOUSE6.075e-2537.89Calcium/calmodulin-dependent protein kinase type 1... [more]
KCC2A_DROME1.036e-2440.52Calcium/calmodulin-dependent protein kinase type I... [more]
KCC1B_HUMAN1.036e-2437.89Calcium/calmodulin-dependent protein kinase type 1... [more]
CIPK6_ORYSJ1.768e-2440.26CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionC31404B09EF CTVClemen1 Citrus clementina cDNA clone C31404B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bp
GCATTTGTCTTCCCGGTCTCTCTTGACTCGTGTTGACCAAAATGGGCAAC
TGTAACGGCCTACCCTCGTCTCAAACTCAACTCCACTCAACCACTGCCGA
TCCCGACACTGGGCCCGGCCACCACCCCAACGGCCTCAAAATAGATCCTC
CGGGTCCTCCTCGTCCTTCTTCCTCTGCCACGTCAGCCACCTCGTCATCC
GTTGGCCGTGTCCTCGGCAAACCCATGGAGGACGTCCGCAACACCTACAT
CTTCGGCCGCGAGCTCGGCCGCGGCCAGTTCGGCATCACCTACTTAGTAA
CTCACAAATACACCAAACAACAATTCGCCTGCAAATCCATCTCCTCTCGC
AAGCTCATAAACCGCGACGACGTCGAAGACGTCCGCCGTGAGGTCCAGAT
CATGCACCACCTAACCGGGCACAGGAATATTGTGGAGCTGAAGGGGGCGT
ATGAGGACAGGCACTCGGTGAATTTGATTATGGATTTGTGTGCGGGAGGG
GAGTTGTTTGATCGGATCATAGCCAAGGGGCATTATTCGGAGAGAGCCGC
TGCGAATTTGTGTCGACAGATGGTGACTGTGGTGCATTACTGTCATTCCA
TGGGTGTGATGCACAGAGACTTGAAGCCTGAGAATTTCTTATTCTCGAGT
TCCGCTGAAGATTCTCCTTTGAAGGCTACTGATTTCGGACTCTCTGTGTT
TTTCAG
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