FC875458
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2B_RAT (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus GN=Camk2b PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 57/151 (37.75%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ++G+G F + T ++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V +CH MGV+HRDLKPEN L +S + + +K DFGL++ Sbjct: 14 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICR-LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 162
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2B_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Mus musculus GN=Camk2b PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 57/151 (37.75%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ++G+G F + T ++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V +CH MGV+HRDLKPEN L +S + + +K DFGL++ Sbjct: 14 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICR-LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 162
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2B_HUMAN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Homo sapiens GN=CAMK2B PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 57/151 (37.75%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ++G+G F + T ++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V +CH MGV+HRDLKPEN L +S + + +K DFGL++ Sbjct: 14 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICR-LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 162
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2B_BOVIN (Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Bos taurus GN=CAMK2B PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 57/151 (37.75%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ++G+G F + T ++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V +CH MGV+HRDLKPEN L +S + + +K DFGL++ Sbjct: 14 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICR-LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 162
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAF7 (Calcium-dependent protein kinase 4 OS=Plasmodium falciparum (isolate 3D7) GN=CPK4 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 9.699e-23 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 3 Query: 264 LGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLF-SSSAEDSPLKATDFGLSVFF 704 LG+G FG L K+T ++A K IS + + + D E + REV+++ L H NI++L +ED + L+ D+ GGELFD II++ + E AA + +Q+++ + Y H V+HRDLKPEN L + + ED +K DFGLS F Sbjct: 76 LGKGSFGEVILSRDKHTGHEYAIKVISKKHVKRKTDKESLLREVELLKMLD-HINIMKLYEFFEDNNYYYLVSDVYTGGELFDEIISRKRFYEIDAARIIKQILSGITYMHKNNVVHRDLKPENILLETKNKEDMIIKIIDFGLSTHF 222
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: RAD53_YEAST (Serine/threonine-protein kinase RAD53 OS=Saccharomyces cerevisiae GN=RAD53 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 60/151 (39.74%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 249 IFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP--LKATDFGLS 695 I +G+G F + T + FA K IS RK+I +++ V RE++++ L H IV LKG YED S ++M+ +GG+L D + A G E A + RQ++T + Y HSMG+ HRDLKP+N L +D P +K TDFGL+ Sbjct: 199 IIDEVVGQGAFATVKKAIERTTGKTFAVKIISKRKVIG--NMDGVTRELEVLQKLN-HPRIVRLKGFYEDTESYYMVMEFVSGGDLMDFVAAHGAVGEDAGREISRQILTAIKYIHSMGISHRDLKPDNILIE---QDDPVLVKITDFGLA 343
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2D_RAT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus GN=Camk2d PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ELG+G F + T Q++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V++CH G++HRDLKPEN L +S ++ + +K DFGL++ Sbjct: 14 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICR-LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 162
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2D_RABIT (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Oryctolagus cuniculus GN=CAMK2D PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ELG+G F + T Q++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V++CH G++HRDLKPEN L +S ++ + +K DFGL++ Sbjct: 14 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICR-LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 162
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2D_PIG (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Sus scrofa GN=CAMK2D PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ELG+G F + T Q++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V++CH G++HRDLKPEN L +S ++ + +K DFGL++ Sbjct: 14 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICR-LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 162
BLAST of FC875458 vs. ExPASy Swiss-Prot
Match: KCC2D_MOUSE (Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Mus musculus GN=Camk2d PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22 Identity = 58/151 (38.41%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 246 YIFGRELGRGQFGITYLVTHKYTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV 698 Y ELG+G F + T Q++A K I+++KL RD + + RE +I L H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V++CH G++HRDLKPEN L +S ++ + +K DFGL++ Sbjct: 14 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICR-LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 162 The following BLAST results are available for this feature:
BLAST of FC875458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875458 ID=FC875458; Name=FC875458; organism=Citrus clementina; type=EST; length=706bpback to top |