FC875469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SEC22_YARLI (Protein transport protein SEC22 OS=Yarrowia lipolytica GN=SEC22 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.402e-40 Identity = 82/194 (42.27%), Postives = 132/194 (68.04%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQAL 723 MV T+I R +DGLPL+ +DDG++ + K+Q K + + LS N A R SIE+G YV HY+++ + Y + + +YP+KLAF YL++L EF++ +G + ++ RPY F++FDTF+QKTK++YQDTR N+ KLN EL +V ++MT+N++++L G LD +S++SS L +ES+ Y + +N +A+ Sbjct: 1 MVLSTLIMRASDGLPLSASVDDGQE--NLSEQKKQCKLVTQKLSA--NSADRASIESGNYVIHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTFMQKTKRVYQDTRATHNLDKLNTELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKYRRAAQRINWEAM 190
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SEC22_SCHPO (Protein transport protein sec22 OS=Schizosaccharomyces pombe GN=sec22 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.537e-37 Identity = 76/181 (41.99%), Postives = 119/181 (65.75%), Query Frame = 1 Query: 184 LPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQAL 723 LPLA +DD R+ E +K+Q K + K LS R SIE+G Y FHY+I+ +CYL +C+++YP+KLAF YLE+L EF G + ++ RPYAF++FDTF+QK+K++Y R N+ KLN EL +V ++MT+N++++L G+ L++++++SS L S Y + +N +AL Sbjct: 7 LPLAASVDDESTERNLESHKKQAKLILKRLS--PTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEEALQPGLRPYAFVQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARRVNLEAL 185
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SEC22_ASHGO (Protein transport protein SEC22 OS=Ashbya gossypii GN=SEC22 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.969e-34 Identity = 75/190 (39.47%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQ-IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLN 711 M+K T+I R DGLPL +DD D A+ K++VK L + A+ ++E+G Y HY+ + V Y+ + +R YP+ LAF YL ++++EFE G + ++ + RPYAF+ FD F+QKTKK+Y D R Q N+ +LN +L V QIMT+N++++L G+ LD++S++S+ L +S+ Y + +N Sbjct: 1 MIKSTLIFR-DDGLPLCSSVDDDTDPSLADQ-KKKVKVLISRFT--PQSANEATLESGAYEMHYVRQQSVVYIVIVERGYPRNLAFAYLANVRHEFEHSYGNEYVKPSVRPYAFVSFDNFLQKTKKIYNDKRVQGNLDQLNSDLLGVKQIMTKNIEDLLYRGDSLDRMSDLSASLRQDSKKYRRSAQKIN 186
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SEC22_KLULA (Protein transport protein SEC22 OS=Kluyveromyces lactis GN=SEC22 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.335e-33 Identity = 75/190 (39.47%), Postives = 116/190 (61.05%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETA-ARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLN 711 M++ T+I R DGLPL +DD D E K++VK L + A+ ++E+G + HYI V Y+ + +R YP+ LAF YL D++ EFE G Q+ + RPY F+ FD F+QKTKK+Y D R Q N+ +LN +L V QIMT+N++++L G+ LD++S+MS+ L +++ Y + +N Sbjct: 1 MIRSTLIFR-EDGLPLCASVDDDTDPSLQEQ-KKKVKILISRFT--PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSKSNVRPYEFVSFDNFLQKTKKVYNDKRVQGNMDQLNQDLKGVKQIMTKNIEDLLYRGDSLDKMSDMSASLRQDAKKYRASAQKIN 186
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SEC22_YEAST (Protein transport protein SEC22 OS=Saccharomyces cerevisiae GN=SEC22 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30 Identity = 73/190 (38.42%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQI-ETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLN 711 M+K T+I R DGLPL +D+ D E KQ+VK + L+ A+ ++E+G + HY+ + V Y +C+ YP+ LAF YL D+ EFE + + RPY F+ FD F+Q TKK Y D + Q N+ +LN EL V QIM++N++++L G+ LD++S+MSS L S+ Y + +N Sbjct: 1 MIKSTLIYR-EDGLPLCTSVDNENDPSLFEQ-KQKVKIVVSRLT--PQSATEATLESGSFEIHYLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPYQFVNFDNFLQMTKKSYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLDKMSDMSSSLKETSKRYRKSAQKIN 186
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SEC22_CANGA (Protein transport protein SEC22 OS=Candida glabrata GN=SEC22 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 67/190 (35.26%), Postives = 109/190 (57.37%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQI-ETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLN 711 M+K T++ R DGLPL +DD D+ D + +Q+ + A+ ++E+ HYI + V Y +C+ YP+ LAF YL D+ EF+ ++ + RPYAF FDTF+Q+TKK Y D + Q N+ +LN EL V QIM++N++++L G+ L+++ +MS+ L S+ Y + +N Sbjct: 1 MIKSTVVYR-DDGLPLCSSVDD--DISDLSLNEQKKRIKMVVSRMTPQSANEATLESKDSEIHYIRQQGVIYFVICEAGYPRNLAFSYLNDVAVEFQHSYSNELSKPTIRPYAFASFDTFLQRTKKAYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLEKMDDMSNSLKISSKKYRKSAQKIN 187
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22A_MOUSE (Vesicle-trafficking protein SEC22a OS=Mus musculus GN=Sec22a PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNE-ASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG Y ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQFPDRCTLKTGRYNINFISSLGVSYMMLCSENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQMEI 145
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22A_HUMAN (Vesicle-trafficking protein SEC22a OS=Homo sapiens GN=SEC22A PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEA-SRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG Y ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEI 145
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22A_MACFA (Vesicle-trafficking protein SEC22a OS=Macaca fascicularis GN=SEC22A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEA-SRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG Y ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVIRVRDGLPLSASTD-----YEQSTGMQECRKYFKMLSRKLAQLPDRCTLKTGHYNINFISSLGVSYMMLCTDNYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQTEI 145
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22A_RAT (Vesicle-trafficking protein SEC22a OS=Rattus norvegicus GN=Sec22a PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16 Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNE-ASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEF-ERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEV 582 M+ + RV DGLPL+ D + Q+ + FK LSR + R +++TG + ++I V Y+ +C YP LAF +L++L+ EF N + TA RPY FI+FD FIQ+TK+ Y + R+ L+D E+ Sbjct: 3 MILSASVVRVRDGLPLSASTDC-----EQSAGVQECRKYFKMLSRKLAQFPDRCTLKTGRHNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMMKTNTAVRPYCFIEFDNFIQRTKQRYNNPRSLSTKINLSDMQMEI 145 The following BLAST results are available for this feature:
BLAST of FC875469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875469 ID=FC875469; Name=FC875469; organism=Citrus clementina; type=EST; length=723bpback to top |