FC875469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: YKT6_SCHPO (Synaptobrevin homolog ykt6 OS=Schizosaccharomyces pombe GN=ykt6 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 44/151 (29.14%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 265 KNLSRGQNEASRMSIETGPYVFH-YIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNG-AQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLN 711 K ++ N R +E YVFH Y +C + D+ YP ++A+ L + +EF N + E+ A +F + DT++ K YQD + I ++ EL E ++ + ++ VL GEKLD + + S L+++SR++ K N Sbjct: 45 KTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWESGAVTLSFPELDTYLSK----YQDPKQADTIMRVQQELDETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMFYKSAKKQN 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12 Identity = 40/149 (26.85%), Postives = 80/149 (53.69%), Query Frame = 1 Query: 271 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNR 714 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + +++ +A+ ++ E+ IM RN+ V GEKL+ + + + L S + ++L R Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLAR 180
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11 Identity = 38/149 (25.50%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 271 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNR 714 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + ++ + + ++ E+ IM RN+ V GE+L+ + + + L S + ++L R Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 38/149 (25.50%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 271 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNR 714 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + ++ + + ++ E+ IM RN+ V GE+L+ + + + L S + ++L R Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 38/149 (25.50%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 271 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNR 714 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + + + + ++ E+ IM RN+ V GE+L+ + + + L S + ++L R Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11 Identity = 38/149 (25.50%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 271 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNR 714 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + + + + ++ E+ IM RN+ V GE+L+ + + + L S + ++L R Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 38/149 (25.50%), Postives = 78/149 (52.35%), Query Frame = 1 Query: 271 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNR 714 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + + + + ++ E+ IM RN+ V GE+L+ + + + L S + ++L R Sbjct: 33 LAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180 The following BLAST results are available for this feature:
BLAST of FC875469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875469 ID=FC875469; Name=FC875469; organism=Citrus clementina; type=EST; length=723bpback to top |