FC875473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP7_ARATH (Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 8.829e-72 Identity = 140/220 (63.64%), Postives = 160/220 (72.73%), Query Frame = 1 Query: 46 MSLRNSCLSRRISRSF----GEAHKSSKETELNAADDSVVSSTTSAPMDXXXXXXXXXXXXXXLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGCKPS 693 M L S LSRRIS SF GE + + + + SS+ SA +LPELLGEIIRRVE TED WP R++VV CACV K+WREIT D +S SGKITFPSCLK PGPR+F +QCLI+RNKKTSTFYLYLALTPSF++KGKFLLAARR+R GA++EYIISLDA D SQGSNAYVGKL SDFLG NFT+YDS+PPHNG KPS Sbjct: 1 MPLSRSLLSRRISNSFRFHQGETTTAPESESIPPPSNMAGSSSWSA-----------------MLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKLPGPRDFSNQCLIKRNKKTSTFYLYLALTPSFTDKGKFLLAARRFRTGAYTEYIISLDADDFSQGSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPS 203
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP1_ORYSJ (Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.119e-58 Identity = 106/160 (66.25%), Postives = 131/160 (81.88%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGCKPSAA 699 LLPEL+ E++RRVE + + WP R++VV+CACVC+RWR+ +V+ P SGKITFPS LKQPGPREFP QC I+RNKK STFYLYL LT + +KGKFL+AARR+RRG H+EYI+SLDA DLSQGSNAY+GKL SDF G NF IYDS+PP++G K S++ Sbjct: 37 LLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFPSSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLTNATVDKGKFLMAARRFRRGPHTEYIVSLDADDLSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSS 196
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP9_ORYSJ (Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.703e-57 Identity = 103/157 (65.61%), Postives = 124/157 (78.98%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGCKPS 693 LLPELL EI+RRV+ + WP R++VVACACVC+RWR+ +V+ P G+ITFPS LKQPGPR+ P C IRRNKK STFYLYL+LT + ++KGKFLLAARR+R GAH+EYIIS D DL GSN+YVGKL SDFLG F IYDS+PP++G KPS Sbjct: 55 LLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPSSLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISYDCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPS 211
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP10_ORYSJ (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica GN=TULP10 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.155e-53 Identity = 98/159 (61.64%), Postives = 125/159 (78.62%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGCKPSA 696 LLPEL+ E++RRVE + + WP R+++V+CACVC+RWRE +V+ SG+ITFPS LKQPGP++FP QC ++RNKK S FYLYL L +KGKFL+AARR+RRG H+EY+ISLDA DLSQGSNAYVGKL SDF G NF IYD++PP++ K S+ Sbjct: 27 LLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKKSMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWGTNFKIYDNQPPYDDAKTSS 185
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 9.830e-47 Identity = 86/153 (56.21%), Postives = 117/153 (76.47%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNG 681 L PELL E++ R+E +E WP R++VVACA VC+ WR ITK+IV+ P SGK+TFP LKQPGPR+ +C IRRN+ T T+YLY+ LT + ++ GKFLLAAR+ R+ ++Y+ISLD D+S+GSN Y+GKL S+FLG FT+YD+ PP++G Sbjct: 55 LPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDG 207
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.190e-46 Identity = 87/153 (56.86%), Postives = 118/153 (77.12%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHN 678 L PELL ++++R+E E +WP R++VVACA VC+ WREI KDIV+SP + GK+TFP LKQPGPR+ QC I+R+K T+YLYL L+P+ SE GKFLLAA+R RR +EYIIS+D+ ++S+ SN YVGK+ S+FLG F +YD++PP+N Sbjct: 62 LPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVDSKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYN 214
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP2_ORYSJ (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45 Identity = 86/155 (55.48%), Postives = 111/155 (71.61%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGCK 687 L+P+LL +I+R VE + WP R++VVACA VC+RWR++ +V+ P SGKITFPS LKQPGPR+ P QC I+RNKK STF+LYL LT ++ KFLLAARR RRG H EY I++++ L GS + VG L S+F G FTI D +PP+ G K Sbjct: 54 LVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQSCVGNLKSNFTGTKFTIRDWQPPYEGAK 208
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45 Identity = 85/153 (55.56%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNG 681 L PELL E++ RVE +E WP R++VVACA VC+ WR I ++IV++P SG +TFP LKQPGPR+ P +C I RN+ T T+YLY+ LT + ++ GKFLLAAR+ RR +EY+ISLD D+S+ +++YVGKL S+FLG FTIYD+ PP+ G Sbjct: 58 LPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAG 210
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.202e-44 Identity = 85/152 (55.92%), Postives = 114/152 (75.00%), Query Frame = 1 Query: 229 PELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFS-EKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNG 681 PELL +++ R+E +ED+WP R+NVV+CA VC+ WREI K+IV+ P LS K+TFP LKQPGPR QC I RN+ T+YLYL L + S + GKFLLAA+R+RR ++YIISL+ D+S+GSN Y+GKL S+FLG FT+YD++P + G Sbjct: 57 PELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPG 208
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44 Identity = 83/154 (53.90%), Postives = 117/154 (75.97%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLAL-TPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNG 681 L PELL ++IRR+E +E +WP R++VV+CA VCK WRE+ K+IV SP GK+TFP LKQPGPR+ QC I+R+K ST++LYL L T ++ GKFLL+A+R+R+ +EY+IS+DA ++S+ S+ Y+GKL S+FLG F IYD++P +NG Sbjct: 62 LPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNG 215 The following BLAST results are available for this feature:
BLAST of FC875473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875473 ID=FC875473; Name=FC875473; organism=Citrus clementina; type=EST; length=716bpback to top |