FC875473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP1_ARATH (Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.963e-44 Identity = 83/153 (54.25%), Postives = 116/153 (75.82%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHN 678 L PELL ++I+R+E +E WP R++VVACA VC+ WR++ K+IV+SP LSGKITFP LKQPGPR+ QC I+R+K T++LYL L+P+ E GKFLL+A+R RR ++EY+IS+ A +S+ SN Y+GK+ S+FLG F IYD++P +N Sbjct: 60 LPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPVSLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVISMHADTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYN 212
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43 Identity = 84/151 (55.63%), Postives = 110/151 (72.85%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSF-SEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPP 672 L PELL ++I+RVE +E +WP R+ VVACA VC+ WRE+TK++VK+ G+ITFP LKQPGPRE P QC +RR++ TST+ LYL L+PS E K LLAAR+ RR + ++ISL + D S S+ YVGKL +FLG FTI+DS+PP Sbjct: 71 LPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITFPISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRTSFVISLVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPP 221
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42 Identity = 79/153 (51.63%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHN 678 L PELL ++++R+E + +WP R++VVACA VC WR++ KDIV++P GK+TFP LKQPGPR+ QC I+R+K T++LYL L+ + E GKFLL+A+R RR H++YIIS+D+ ++S+ S+ Y+GKL S+FLG F IYD++PP+N Sbjct: 59 LPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKNISRSSSGYIGKLRSNFLGTKFIIYDTQPPYN 211
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42 Identity = 81/153 (52.94%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHN 678 L PELL ++I+R+E +E +WP R++VVACA VC+ WR + ++IV P + GK+TFP LKQPGPR+ QC I+R+K TF+L+L L+P+ E GKFLL+A+R RR +EYIIS+DA ++S+ SN+Y+GKL S+FLG F +YD++PP N Sbjct: 62 LPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMDADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPN 214
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP6_ARATH (Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.272e-42 Identity = 80/151 (52.98%), Postives = 112/151 (74.17%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFS-EKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPP 672 L PELL +II+R+E+ + WP R++VVACA VCK WRE+TK++VK P LSG ITFP L+QPGPR+ P QC I+R + T + LYL L+P+ S +K K LL+A+R RR +E+++SL D S+ S+ Y+GKL S+FLG FT+Y+++PP Sbjct: 72 LPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPISLRQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLSGNDFSRSSSNYIGKLRSNFLGTKFTVYENQPP 222
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.274e-42 Identity = 84/161 (52.17%), Postives = 115/161 (71.43%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLAL-TPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGCKPSAAG 702 L PELL +II R+E +E +WP R++VVACA VC+ WRE+ K+IVK+P L GKITFP L+QPGPR+ QC IRR+K T T+YLYL+L + + GKFLL+A+R +EY+IS++A +LS+ +N +GKL S+FLG F IYD+ P+N S +G Sbjct: 56 LPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTNTNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSG 216
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.290e-42 Identity = 97/229 (42.36%), Postives = 130/229 (56.77%), Query Frame = 1 Query: 28 RSGWAKMSLRN---SCLSRRISRSFGEAHKSSKETELNAADDSVVSSTTSAPMDXXXXXXXXXXXXXXLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNGCKPSAAG 702 R G+ +S R + R RS H+ AA D V SS + L PELL ++I R+E +E +WP R+NVVACA VC+ WR++ ++IVK+P GKITFP LKQPGPR QC I+R+K T T+ LYL L+ + E GKFLL+A+RY R +EY I + A + S+ SN Y+GKL S+ LG F IYD++PP N S +G Sbjct: 11 RDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHAAAAAADVVQSSCWA-----------------NLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSG 222
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP5_ARATH (Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.243e-41 Identity = 78/149 (52.35%), Postives = 113/149 (75.84%), Query Frame = 1 Query: 235 LLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPS-FSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHN 678 LL +++++++ +E +WP R+ VVACA VCK WR + KDIVKSP SGK+TFP LKQPGPR+ QC I+R+K T++LYL+L+P+ E GKFLL+A+R RR ++EY+IS+DA ++S+ S+ Y+GKL S+FLG F +YD+ P +N Sbjct: 62 LLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYN 210
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41 Identity = 91/219 (41.55%), Postives = 130/219 (59.36%), Query Frame = 1 Query: 28 RSGWAKMSLRNSCLSRRISRSFGEAHKSSKETELNAADDSVVSSTTSAPMDXXXXXXXXXXXXXXLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSF-SEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSRPPHNG 681 R G+ +S R+ ++ HK ++ L+ DDS S L PELL E+IRR+E E +WP R+NVV A VC+ WRE+ K+ V SP GK+TFP +KQPGPR+ QC I+RN+ ST++LYL L+ +E GKF+LAA+R+R+ +EY IS+ +G++S+ S +GKL S+FLG F IYD++PP+NG Sbjct: 11 RDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESR--------------WASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMVSGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNG 215
BLAST of FC875473 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.053e-40 Identity = 84/148 (56.76%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 223 LLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPSFSEKGKFLLAARRYRRGAHSEYIISLDAGDLSQGSNAYVGKLSSDFLGDNFTIYDSR 666 L PELL +II RVE +E +WP R VV+CA VCK WR IT +IV+ P GK+TFP LKQPGPR+ P QC I+RN+ T+T+ LY L PS +E K LLAARR RR +++IISL A + S+ S+ YVGKL S FLG FTIYD++ Sbjct: 51 LPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPGPRDSPIQCFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISLSAKNFSRSSSTYVGKLRSGFLGTKFTIYDNQ 198 The following BLAST results are available for this feature:
BLAST of FC875473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875473 ID=FC875473; Name=FC875473; organism=Citrus clementina; type=EST; length=716bpback to top |