FC875474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.035e-46 Identity = 66/127 (51.97%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 + ++ F AQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY C ATD V+SFKSAIWFWMT Q PKPSCH+VIT +P Sbjct: 121 KREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQP 245 HSP 2 Score: 71.633 bits (174), Expect = 1.035e-46 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T R REIAAF Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAF 127
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.906e-45 Identity = 64/126 (50.79%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN-LNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 +++L F AQT HETTGGW AP G YAWGYCF+SE + YC+ ++PC KYYGRGPIQLT NYNY +T+P +SFK+AIWFWMT Q KPS H+VIT P Sbjct: 132 KKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTP 255 HSP 2 Score: 77.411 bits (189), Expect = 1.906e-45 Identity = 31/64 (48.44%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 163 TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F FG +G++ + +E+AAF Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAF 138
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.482e-45 Identity = 60/127 (47.24%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 + ++ F QT HETTGGW AP G ++WGYCF E +PPS YC + +PC KYYGRGPIQL++N+NY ATD +SFK+A+WFWMT Q KPS H+VIT P Sbjct: 141 KREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAP 265 HSP 2 Score: 82.8037 bits (203), Expect = 2.482e-45 Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN R RE+AAF Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAF 147
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 9.337e-45 Identity = 65/127 (51.18%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 + ++ F AQT HETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT + P Sbjct: 132 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSP 256 HSP 2 Score: 76.2554 bits (186), Expect = 9.337e-45 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 169 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R RE+AAF Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAF 138
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 125.561 bits (314), Expect = 3.510e-44 Identity = 65/127 (51.18%), Postives = 76/127 (59.84%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 + ++ F AQT HETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT + P Sbjct: 129 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSP 253 HSP 2 Score: 74.3294 bits (181), Expect = 3.510e-44 Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 118 CGSGVVCGE----RDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 CGS CG+ + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF FG +G R RE+AAF Sbjct: 43 CGSTPYCGDGCQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAF 135
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.976e-44 Identity = 62/127 (48.82%), Postives = 73/127 (57.48%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 + ++ F AQT HETTGGW AP G +AWGYCF E S YC + +PC +YYGRGPIQL+ NYNY ATD + FK+AIWFWMTAQPPKPS H VI + P Sbjct: 77 KREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSP 201 HSP 2 Score: 75.485 bits (184), Expect = 5.976e-44 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 1 Query: 160 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ + RE+AAF Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF 83
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.015e-43 Identity = 62/121 (51.24%), Postives = 72/121 (59.50%), Query Frame = 2 Query: 353 FFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 F AQT HETTGGW AP G +AWGYCF E + YC + +PC +YYGRGPIQL+ NYNY ATDP +SFK+A+WFWMTAQ PKPS H VIT + P Sbjct: 83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSP 201 HSP 2 Score: 73.9442 bits (180), Expect = 1.015e-43 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 160 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R R++AAF Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.918e-43 Identity = 60/129 (46.51%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEI--SPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 + ++ F AQT HETTGGW AP G Y+WGYCF E + S YC + +PC KYYGRGPIQ+++NYNY A+D +SFK+A WFWMT Q PKPSCH V+T + P Sbjct: 131 KREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTP 257 HSP 2 Score: 78.1814 bits (191), Expect = 2.918e-43 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 118 CGSGVVCGERDTGH----------GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 CGSG C + +G G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ R RE+AAF Sbjct: 51 CGSG--CQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAF 137
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.972e-43 Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 + +L FF QT HETTGGW AP G +AWGYC ++EI+P P YYGRGPIQLT YNY ++DPV++F++AIWFWMTAQ PKPSCH+VIT++ P Sbjct: 78 RRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------PYYGRGPIQLTHKYNYQ--LAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTP 188 HSP 2 Score: 69.707 bits (169), Expect = 4.972e-43 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 178 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R RE+AAFF Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 85
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.869e-42 Identity = 60/126 (47.62%), Postives = 75/126 (59.52%), Query Frame = 2 Query: 338 EKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 +++ F AQT HETTGGW AP G Y+WGYC+ E P YC + +PC KY+GRGPIQ+++NYNY A D V+SFK+A+WFWMTAQ PKPS H+VIT P Sbjct: 58 KEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNY--GAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSP 181 HSP 2 Score: 69.707 bits (169), Expect = 1.869e-42 Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 178 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAF 63 The following BLAST results are available for this feature:
BLAST of FC875474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875474 ID=FC875474; Name=FC875474; organism=Citrus clementina; type=EST; length=704bpback to top |