FC875474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.544e-34 Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 1 Query: 178 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R +EIAAFF Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFF 86 HSP 2 Score: 82.0333 bits (201), Expect = 4.544e-34 Identity = 48/123 (39.02%), Postives = 60/123 (48.78%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 ++++ FF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY + ATD +SFK+AIWFWMT Q KPS H+VI P Sbjct: 79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLV--ATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTP 186
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.308e-33 Identity = 35/60 (58.33%), Postives = 47/60 (78.33%), Query Frame = 1 Query: 178 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R +EIAAFF Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFF 86 HSP 2 Score: 82.0333 bits (201), Expect = 1.308e-33 Identity = 48/123 (39.02%), Postives = 60/123 (48.78%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 ++++ FF QT HETTGG A + GYCF+ + +YYGRGPIQLT NY + ATD +SFK+AIWFWMT Q KPS H+VI P Sbjct: 79 RKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD-----------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLV--ATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTP 186
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.511e-31 Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEMEP 703 + ++ F AQT H T+GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY ATDP ++FK+A+W WMTA+ P +PS H V+T + P Sbjct: 149 KREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELV--ATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTP 267 HSP 2 Score: 72.4034 bits (176), Expect = 1.511e-31 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 109 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.511e-31 Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQ-PPKPSCHEVITDEMEP 703 + ++ F AQT H T+GG Y+WGYC+ S +C N +PC GK Y+ RGP+Q+ +NYNY ATDP ++FK+A+W WMTA+ P +PS H V+T + P Sbjct: 149 KREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELV--ATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTP 267 HSP 2 Score: 72.4034 bits (176), Expect = 1.511e-31 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 109 ARNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 +R+ G V T G + +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ R RE+AAF Sbjct: 74 SRDGGDDDVAAVLLTAPGGGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAF 155
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.044e-23 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 374 ETTGGWRDAPGGEYAWGYCFISEIS-PPSPYC-NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVI 685 + T G R +AWG C I+ + + +C + ++PC KY RGPIQLT N+NY DP++SFK+A+WFWM+ KPSCH+++ Sbjct: 192 QATSGERSDVENPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNY--GLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIV 297 HSP 2 Score: 59.3066 bits (142), Expect = 2.044e-23 Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 151 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAF 354 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FPAFG G+ R RE+AAF Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAF 186
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 3.261e-20 Identity = 37/109 (33.94%), Postives = 53/109 (48.62%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSP-YCN---LNYPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFW 643 + ++ FFA HET +C+I EI PS YC+ +PC GK YYGRGP+Q++WN+NY A PVL+F++A+W+W Sbjct: 119 KREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNY--GPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212 HSP 2 Score: 58.9214 bits (141), Expect = 3.261e-20 Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ REIAAFF Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFF 126
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.170e-20 Identity = 39/109 (35.78%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC---NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWM 646 + ++ FFA HET +C+ISEI+ + YC N +PC KYYGRGP+Q++WNYNY A D V++FK+A+WFWM Sbjct: 131 KREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224 HSP 2 Score: 48.1358 bits (113), Expect = 7.170e-20 Identity = 26/79 (32.91%), Postives = 36/79 (45.57%), Query Frame = 1 Query: 121 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 G G G G G+ G + +++ F + C + FYT AF+ A A+P F + G E REIAAFF Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGIKNQAGS-GCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFF 138
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.579e-19 Identity = 38/111 (34.23%), Postives = 55/111 (49.55%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN---LNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTA 652 + ++ FFA HET +C+ISEI+ + YC+ +PC KYYGRGP+Q++WNYNY A D V++FK+A+WFWM + Sbjct: 120 KREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215 HSP 2 Score: 48.9062 bits (115), Expect = 1.579e-19 Identity = 26/85 (30.59%), Postives = 38/85 (44.71%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 CG G G +G G G + +++ F + C + FYT AF+ A K +P F + G++ REIAAFF Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGIKNQAGS-GCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFF 127
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 6.233e-18 Identity = 39/108 (36.11%), Postives = 50/108 (46.30%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWR-DAPGGEYAWGYCFISEISPPSPYCNLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMT 649 + ++ FFA HETT + G+ YC + + YPC KYYGRGP+QL+WNYNY ATD SFK+A+WFWMT Sbjct: 136 KREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAA--------QYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233 HSP 2 Score: 47.7506 bits (112), Expect = 6.233e-18 Identity = 32/92 (34.78%), Postives = 42/92 (45.65%), Query Frame = 1 Query: 115 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 NC SG G T G G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ REIAAFF Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFF 143
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 63.5438 bits (153), Expect = 8.122e-18 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 2 Query: 425 YCFISEISPPS-PYCNLN---YPCR-GK-YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPP 661 +C+I EI+ S YC+ N YPC GK Y+GRGPIQL+WNYNY C +++P ++F++ +WFWM + P Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218 HSP 2 Score: 47.7506 bits (112), Expect = 8.122e-18 Identity = 30/84 (35.71%), Postives = 41/84 (48.81%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + REIA F Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMF 126 The following BLAST results are available for this feature:
BLAST of FC875474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875474 ID=FC875474; Name=FC875474; organism=Citrus clementina; type=EST; length=704bpback to top |