FC875474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 49/138 (35.51%), Postives = 61/138 (44.20%), Query Frame = 2 Query: 290 KLFQPLVTLEMKPCVQEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEMEP 703 K F T + ++ F AQT HETTGGW AP G Y G Y+GRGPIQ+++NYNY +D + FK+A+WFWMT Q PKPS H+VIT P Sbjct: 30 KSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG-------------------STSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLV--TSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSP 146
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 56.6102 bits (135), Expect = 5.418e-16 Identity = 33/104 (31.73%), Postives = 50/104 (48.08%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWM 646 + ++ +FA HET +A YC S+ P CN N +Y+GRGP+QL+WNYNY+ DP++SFK+++WFW+ Sbjct: 97 KREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPNK----EYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190 HSP 2 Score: 48.521 bits (114), Expect = 5.418e-16 Identity = 29/81 (35.80%), Postives = 40/81 (49.38%), Query Frame = 1 Query: 118 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 CG G G D G + I+++E F D + + CP + FYT F+EA A+P FG + R REIAA+F Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYF 104
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.599e-15 Identity = 40/110 (36.36%), Postives = 55/110 (50.00%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYCNLN---YPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWM 646 + ++ FFA HET C+I+EI+ S YC+ N +PC+ KYYGRGP+Q++WNYNY A DP +SFK+A+WFWM Sbjct: 138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM 232 HSP 2 Score: 36.1946 bits (82), Expect = 2.599e-15 Identity = 26/89 (29.21%), Postives = 36/89 (40.45%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGGELG---------KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 C SG G G G GG G + + E F + + + C + FYT +F+ AA ++ F REIAAFF Sbjct: 57 CRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFF 145
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 63.5438 bits (153), Expect = 7.415e-15 Identity = 38/110 (34.55%), Postives = 54/110 (49.09%), Query Frame = 2 Query: 335 QEKLLPFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYC---NLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWM 646 + ++ FFA HET C+I+EI+ + YC N +PC+ KYYGRGP+Q++WN+NY A DP +SFK+A+WFWM Sbjct: 135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229 HSP 2 Score: 37.7354 bits (86), Expect = 7.415e-15 Identity = 16/39 (41.03%), Postives = 22/39 (56.41%), Query Frame = 1 Query: 241 CPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 C + FYT +F+ AA+++ F N REIAAFF Sbjct: 104 CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFF 142
BLAST of FC875474 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 3.575e-14 Identity = 31/81 (38.27%), Postives = 42/81 (51.85%), Query Frame = 2 Query: 425 YCFISEISPPSP-YCN----LNYPCRGK--YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSFKSAIWFWM 646 +C+I EI S YC+ YPC Y+GRGPIQL+WN+NY + D V+SFK+A+W+WM Sbjct: 136 FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 HSP 2 Score: 42.3578 bits (98), Expect = 3.575e-14 Identity = 26/80 (32.50%), Postives = 36/80 (45.00%), Query Frame = 1 Query: 118 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFF 357 CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E REIAA F Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAF 126 The following BLAST results are available for this feature:
BLAST of FC875474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875474 ID=FC875474; Name=FC875474; organism=Citrus clementina; type=EST; length=704bpback to top |