FC875481

Overview
NameFC875481
Unique NameFC875481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.562e-76
Identity = 141/232 (60.78%), Postives = 178/232 (76.72%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            R TPSYV FTD ERL+GDAAKNQ A NP  T+FD KRLIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGLDK      E+ V+++DLGGGTFDVSLL+I+ G+FEV ATAGDTHLGGEDFD R+++HFV+ + +K   D++ + +A+ +L+
Sbjct:   81 RITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDKTG---DERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLK 308          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.562e-76
Identity = 141/232 (60.78%), Postives = 178/232 (76.72%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            R TPSYV FTD ERL+GDAAKNQ A NP  T+FD KRLIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGLDK      E+ V+++DLGGGTFDVSLL+I+ G+FEV ATAGDTHLGGEDFD R+++HFV+ + +K   D++ + +A+ +L+
Sbjct:   81 RITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDKTG---DERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLK 308          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.562e-76
Identity = 141/232 (60.78%), Postives = 178/232 (76.72%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            R TPSYV FTD ERL+GDAAKNQ A NP  T+FD KRLIGR+F D  VQ D K +P+KV+     KP + V+     K    EE+S+MVL KM+EIAE YLG  + +AVVTVPAYFND+QRQATKDAG IAGLNV+R++NEPTAAAIAYGLDK      E+ V+++DLGGGTFDVSLL+I+ G+FEV ATAGDTHLGGEDFD R+++HFV+ + +K   D++ + +A+ +L+
Sbjct:   81 RITPSYVAFTDEERLVGDAAKNQYAANPRRTIFDIKRLIGRKFDDKDVQKDAKHFPYKVV-NKDGKPHVKVDVNQTPKTLTPEEVSAMVLGKMKEIAEGYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRVVNEPTAAAIAYGLDKTG---DERQVIVYDLGGGTFDVSLLSIDNGVFEVLATAGDTHLGGEDFDQRVMDHFVKLYNKKNNVDVTKDLKAMGKLK 308          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 9.876e-76
Identity = 144/232 (62.07%), Postives = 178/232 (76.72%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            R TPSYV FT  ERLIGDAAKNQ + N  NTVFD KRLIG +++D  VQ ++K  P+K+      KP++ V +  E K F+ EEIS M+L KM+ IAE Y+G  I +AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAAIAYGLDK   + GEK ++++DLGGGTFDVSLL+IE G+FEV ATAGDTHLGGEDFD ++V +    FK+K   DISGN +A+ +L+
Sbjct:   81 RITPSYVAFTPEERLIGDAAKNQASSNVENTVFDIKRLIGLKYNDKMVQKEIKHLPYKIDKKDG-KPVVKVEFNDETKTFSPEEISGMILTKMKSIAEEYMGKKITHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDK---TEGEKQIIVYDLGGGTFDVSLLSIEGGVFEVLATAGDTHLGGEDFDFKVVRYLSSVFKKKHNIDISGNSKAISKLK 308          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.130e-71
Identity = 135/233 (57.94%), Postives = 179/233 (76.82%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMR-IINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLR 696
            R TPSYV F D ER +G+AAK +  ++PT TVFD KRLIGR+F D  V  D  L P++++     KP I V  K ++  FA E+IS+MVL KM+EIA+++LG  +KNAVVTVPAYFND+QRQATKDAG IAGLN++R IIN+PTAAA+AY LDKK     E ++L++DLGGGTFDVS+L I+ G+FEV ATAG+THLGGEDFD R++++F++ FK+K   D+  + RA+++LR
Sbjct:   60 RITPSYVSFVDGERKVGEAAKLEATVHPTQTVFDVKRLIGRKFDDQEVVKDRSLLPYEIVNNQG-KPNIKVQIKDKDTTFAPEQISAMVLEKMKEIAQSFLGKPVKNAVVTVPAYFNDAQRQATKDAGTIAGLNIVRIIINQPTAAALAYALDKKE----ETSILVYDLGGGTFDVSILVIDNGVFEVYATAGNTHLGGEDFDQRVMDYFIKMFKKKNNIDLRTDKRAIQKLR 287          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS1 (Chaperone protein dnaK OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=dnaK PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.747e-70
Identity = 135/234 (57.69%), Postives = 175/234 (74.79%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS VGFTD+ERL+G  AK Q   NP+NTVF  KRLIGRR  DA V+ D KL P+ ++ G      + V  +GE+  ++  +IS+ +L KM+E AEAYLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK T    K + ++DLGGGTFD+++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVGFTDSERLVGQPAKRQAVTNPSNTVFAVKRLIGRRVGDAEVEKDKKLVPYSIVNGGNGDAWVEV--RGEK--YSPSQISAFILQKMKETAEAYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDT----KTIAVYDLGGGTFDITILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTLDKMALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: HSP7F_CAEEL (Heat shock 70 kDa protein F, mitochondrial OS=Caenorhabditis elegans GN=hsp-6 PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 8.098e-70
Identity = 132/235 (56.17%), Postives = 178/235 (75.74%), Query Frame = 1
Query:    1 RTTPSYVGFT-DTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V FT D ERL+G  AK Q   N  NT+F  KRLIGRR+ D  VQ D+K+ P+K++        +    + + K ++  ++ + VL+KM+E AE+YLG+T+ NAVVTVPAYFNDSQRQATKDAG I+GLNV+R+INEPTAAA+AYGLDK A   G+K + ++DLGGGTFDVS+L I++G+FEVK+T GDT LGGEDFD+ +V+H V EFK+++  D++ +P+A++RLR A
Sbjct:   63 RTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKDA---GDKIIAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRLREA 290          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS4 (Chaperone protein dnaK OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dnaK PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.381e-69
Identity = 134/234 (57.26%), Postives = 175/234 (74.79%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS VGFTD+ERL+G  AK Q   NP+NTVF  KRLIGRR  DA V+ D KL P+ ++ G      + V  +GE+  ++  +IS+ +L KM+E AEAYLG ++  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK T    K + ++DLGGGTFD+++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVGFTDSERLVGQPAKRQAVTNPSNTVFAVKRLIGRRVGDAEVEKDKKLVPYSIVNGGNGDAWVEV--RGEK--YSPSQISAFILQKMKETAEAYLGESVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDT----KTIAVYDLGGGTFDITILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTLDKMALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS5 (Chaperone protein dnaK OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.804e-69
Identity = 134/234 (57.26%), Postives = 175/234 (74.79%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS VGFTD+ERL+G  AK Q   NP+NTVF  KRLIGRR  DA V+ D KL P+ ++ G      + V  +GE+  ++  +IS+ +L KM+E AEAYLG ++  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK T    K + ++DLGGGTFD+++L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVGFTDSERLVGQPAKRQAVTNPSNTVFAVKRLIGRRVGDAEVEKDKKLVPYAIVNGGNGDAWVEV--RGEK--YSPSQISAFILQKMKETAEAYLGESVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKDT----KTIAVYDLGGGTFDITILEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTLDKMALQRLKEA 259          
BLAST of FC875481 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCA (Chaperone protein dnaK OS=Rhodobacter capsulatus GN=dnaK PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.077e-69
Identity = 133/234 (56.84%), Postives = 174/234 (74.36%), Query Frame = 1
Query:    1 RTTPSYVGFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKKQXDISGNPRALRRLRTA 702
            RTTPS V +TD ERL+G  AK Q   NPTNTVF  KRLIGRR +DA V+ D KL P+ ++ G      + V  +GE+  F+  ++S+++L KM+E AE+YLG T+  AV+TVPAYFND+QRQATKDAG IAGL V+RIINEPTAAA+AYGLDKK      K + ++DLGGGTFD+S+L I++G+FEVK+T GDT LGGEDFD R+VN+   EFK++   D++ +  AL+RL+ A
Sbjct:   34 RTTPSIVAYTDNERLVGQPAKRQAVTNPTNTVFAVKRLIGRRTTDAEVEKDKKLVPYNIVDGGNGDAWVEV--RGEK--FSPAQVSAVILQKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK----DSKTIAVYDLGGGTFDISVLEIDDGLFEVKSTNGDTFLGGEDFDMRIVNYLADEFKKEHGVDLTKDKMALQRLKEA 259          
The following BLAST results are available for this feature:
BLAST of FC875481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_ASPNG7.562e-7660.7878 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA7.562e-7660.7878 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW7.562e-7660.7878 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_DEBHA9.876e-7662.0778 kDa glucose-regulated protein homolog OS=Debary... [more]
GRP78_PLAFO1.130e-7157.9478 kDa glucose-regulated protein homolog OS=Plasmo... [more]
DNAK_RHOS14.747e-7057.69Chaperone protein dnaK OS=Rhodobacter sphaeroides ... [more]
HSP7F_CAEEL8.098e-7056.17Heat shock 70 kDa protein F, mitochondrial OS=Caen... [more]
DNAK_RHOS41.381e-6957.26Chaperone protein dnaK OS=Rhodobacter sphaeroides ... [more]
DNAK_RHOS51.804e-6957.26Chaperone protein dnaK OS=Rhodobacter sphaeroides ... [more]
DNAK_RHOCA3.077e-6956.84Chaperone protein dnaK OS=Rhodobacter capsulatus G... [more]

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Properties
Property NameValue
Genbank descriptionC31404D09EF CTVClemen1 Citrus clementina cDNA clone C31404D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875481 ID=FC875481; Name=FC875481; organism=Citrus clementina; type=EST; length=703bp
AGGACGACGCCGTCTTATGTGGGGTTCACCGACACGGAGCGTTTGATCGG
GGACGCTGCTAAGAACCAGGTCGCCATGAACCCCACGAACACCGTCTTTG
ATGCAAAGAGGTTGATTGGTAGGAGATTCAGCGATGCATCAGTCCAAGGA
GATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACCAGCTGACAAGCC
CATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGTTTGCTGCTGAGG
AAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATTGCCGAGGCTTAC
CTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCCTGCTTACTTCAA
TGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCATTGCTGGGCTTA
ATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGC
CTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGA
TTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAA
TCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGAT
TTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAA
ACAGAANGATATTAGTGGCAACCCTAGAGCTCTTAGGAGATTGAGGACTG
CTT
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