FC875484

Overview
NameFC875484
Unique NameFC875484
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: OYE1_SACPS (NADPH dehydrogenase 1 OS=Saccharomyces pastorianus GN=OYE1 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 5.431e-21
Identity = 63/184 (34.24%), Postives = 99/184 (53.80%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRSYN--NVP-QPHAILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQD-YQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLL 685
            L  P  +G+  L  R V+ PLTR R+ +  N+P +  A+ YY+QR  + G ++I E   +S  A GY + PG+W++EQ+  W  I +A+H K    + Q+  +G  +  D    +G    S +D       +      A   P   LT DEI Q + ++  AA+N+I AG DG+E+H A+G+LL
Sbjct:   17 LFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLWVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKAN-NPQHSLTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLL 199          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: OYE2_YEAST (NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae GN=OYE2 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 64/184 (34.78%), Postives = 98/184 (53.26%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRSYN--NVP-QPHAILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQD-YQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLL 685
            L  P  +G+  L  R V+ PLTR R+ +  N+P +  A+ YY+QR  + G L+I E T  S  + GY + PGIW++EQ++ W  I  A+H      + Q+  +G  +  D    +G    S +D       +      A   P   +T DEI Q V ++  AA+N+I AG DG+E+H A+G+LL
Sbjct:   17 LFKPIKIGNNELLHRAVIPPLTRMRAQHPGNIPNRDWAVEYYAQRAQRPGTLIITEGTFPSPQSGGYDNAPGIWSEEQIKEWTKIFKAIHENKSFAWVQLWVLGWAAFPDTLARDGLRYDSASDNVYMNAEQEEKAKKAN-NPQHSITKDEIKQYVKEYVQAAKNSIAAGADGVEIHSANGYLL 199          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: KYE1_KLULA (Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 62/194 (31.96%), Postives = 102/194 (52.58%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQD-YQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLLTIYEGSVNDR 715
            +  P  +G+  L  RVV+  LTR R+ +  NVP P  A+ YY QR+   G ++I E    S  + GY + PG+W++EQ+  W+ I  A+H      + Q+  +GR +  D    +G    S +D+    +       I    P   +T DEI Q + D+  AA+  I+AG DG+E+H A+G+LL  +   ++++
Sbjct:   16 IFKPIKIGNTELKHRVVMPALTRMRALHPGNVPNPDWAVEYYRQRSQYPGTMIITEGAFPSAQSGGYDNAPGVWSEEQLAQWRKIFKAIHDNKSFVWVQLWVLGRQAFADNLARDGLRYDSASDEVYMGEDEKERA-IRSNNPQHGITKDEIKQYIRDYVDAAKKCIDAGADGVEIHSANGYLLNQFLDPISNK 208          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: EBP1_CANAL (Probable NADPH dehydrogenase OS=Candida albicans GN=EBP1 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.932e-18
Identity = 65/185 (35.14%), Postives = 100/185 (54.05%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQR-SYNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSN-QDYQPNGQAPISCTDKPLTPQIRTNGVDIAQ--FTPPRRLTTDEIPQIVN-DFRLAARNAIEAGFDGIELHGAHGFLL 685
            L  P  +G+  L  R+   P TR R S +++P    + YY+ R+   G L+I EAT  S+        PGI+   Q ++WK I +A+H  G     Q+ ++GRV+N +D + +G   I+    P       N   +A+      R LT +EI  IV  ++  AA++A+EAGFD +E+HGAHG+LL
Sbjct:   28 LFQPIKVGNNVLPQRIAYVPTTRFRASKDHIPSDLQLNYYNARSQYPGTLIITEATFASERGGIDLHVPGIYNDAQAKSWKKINEAIHGNGSFSSVQLWYLGRVANAKDLKDSGLPLIA----PSAVYWDENSEKLAKEAGNELRALTEEEIDHIVEVEYPNAAKHALEAGFDYVEIHGAHGYLL 208          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: NAMA_BACA2 (NADPH dehydrogenase OS=Bacillus amyloliquefaciens (strain FZB42) GN=namA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 56/182 (30.77%), Postives = 92/182 (50.55%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRSY--NNVPQP-HAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLL 685
            L TP+ +  + + +R+V+AP+    S+  +   QP H   Y S+   + GL+I EAT V+   +      GIW+ + +E +  + + V A+G     Q+ H GR +  +      + I     P   Q +T          P  +TT++I + + +F+ AA  A EAGFD IELH AHG+L+
Sbjct:    5 LFTPWTVKDVTIKNRIVMAPMCMYSSHEKDGKLQPFHMAHYISRAIGQVGLIIVEATAVNPQGRISDQDLGIWSDDHIEGFAKLTEQVKAQGSKIGIQLAHAGRKAELEGDIYAPSAI-----PFDEQSKT----------PAEMTTEQIKETIQEFKQAAARAKEAGFDIIELHAAHGYLM 171          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: NAMA_LISMF (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=namA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 59/195 (30.26%), Postives = 90/195 (46.15%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGR---VSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLLTIYEGSVNDR 715
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR   +  +   P+  A    +DKP+                   LT + I ++V DF+ AA  A EAGFD IE+H AHG+L+  +   + +R
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNR 180          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: NAMA_LISMC (NADPH dehydrogenase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=namA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 59/195 (30.26%), Postives = 90/195 (46.15%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGR---VSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLLTIYEGSVNDR 715
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H  G     Q+ H GR   +  +   P+  A    +DKP+                   LT + I ++V DF+ AA  A EAGFD IE+H AHG+L+  +   + +R
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPV------------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNR 180          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: NAMA_LISW6 (NADPH dehydrogenase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=namA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16
Identity = 57/192 (29.69%), Postives = 89/192 (46.35%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRSYNN---VPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLLTIYEGSVNDR 715
            L + Y +  + L +R+V++P+      N        H   Y S+     GL+I EAT V +  +      G+W  EQV A K +VD +H+ G     Q+ H GR +    +    + I+  +K   P                 LT + I ++V DF+ AA  A EAGFD IE+H AHG+L+  +   + +R
Sbjct:    4 LFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKHLVDGLHSHGAKAGIQLAHAGRKAVLPGEIVAPSAIAYDEKSAKPV---------------ELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNR 180          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: OYEA_SCHPO (Putative NADPH dehydrogenase C5H10.04 OS=Schizosaccharomyces pombe GN=SPAC5H10.04 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 63/191 (32.98%), Postives = 98/191 (51.31%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTRQRS--YNNVPQPHAILYYSQRTT-KGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPN--GQAPISCTDKPLTPQIRTNG------VDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIE-AGFDGIELHGAHGFLL 685
            L  P  +G++ L  R+V AP+TR R+  Y  +     + YYSQR+   G LLIA+AT V + + G+P+ P  +TKEQ E+W P+V+AVH      F Q   +      +Y+ +      I+ +D P  P     G      V   +    + ++  +I + + DF  AA  A+  A  DG+E+H  +GFLL
Sbjct:    7 LFKPIKVGNMLLQHRIVHAPMTRLRATDYGKITGL-MVEYYSQRSMIPGTLLIADATFVGEKSGGFPNNPRCFTKEQAESWIPLVEAVHKNKSFLFIQFWPLPGDLKDEYRNDLEKMQKITYSDCPQDPGGLPAGIHSFDAVQGVEVYKKKYMSKRDIQEHIQDFVNAADLAVNIAKADGVEIHQVNGFLL 196          
BLAST of FC875484 vs. ExPASy Swiss-Prot
Match: NAMA_GEOSW (NADPH dehydrogenase OS=Geobacillus sp. (strain WCH70) GN=namA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 54/192 (28.12%), Postives = 91/192 (47.40%), Query Frame = 2
Query:  149 LLTPYNMGSLNLSDRVVLAPLTR---QRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLLTIYEGSVNDR 715
            L +PY +  + + +R+V++P+           V   H I Y ++   + GL+I EAT V+   +      GIW+ E V+  + +   V   G     Q+ H GR S  D +    + I  ++K  TP               + +T  +I + +  F+  AR A EAGFD IE+HGAHG+L+  +   +++R
Sbjct:    5 LFSPYTIRGVTIKNRIVMSPMCMYSCDTEDGKVRNWHKIHYPTRAVGQVGLIIVEATAVAAQGRISSRDLGIWSDEHVDGLRELASLVKEHGAKIGIQLAHAGRKSEVDGEIIAPSAIPFSEKTRTP---------------KEMTKADIEETIQAFQNGARRAKEAGFDIIEIHGAHGYLINEFLSPLSNR 181          
The following BLAST results are available for this feature:
BLAST of FC875484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
OYE1_SACPS5.431e-2134.24NADPH dehydrogenase 1 OS=Saccharomyces pastorianus... [more]
OYE2_YEAST1.580e-2034.78NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae ... [more]
KYE1_KLULA1.580e-2031.96Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1... [more]
EBP1_CANAL1.932e-1835.14Probable NADPH dehydrogenase OS=Candida albicans G... [more]
NAMA_BACA23.643e-1730.77NADPH dehydrogenase OS=Bacillus amyloliquefaciens ... [more]
NAMA_LISMF4.028e-1630.26NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]
NAMA_LISMC4.028e-1630.26NADPH dehydrogenase OS=Listeria monocytogenes sero... [more]
NAMA_LISW65.261e-1629.69NADPH dehydrogenase OS=Listeria welshimeri serovar... [more]
OYEA_SCHPO6.871e-1632.98Putative NADPH dehydrogenase C5H10.04 OS=Schizosac... [more]
NAMA_GEOSW6.871e-1628.13NADPH dehydrogenase OS=Geobacillus sp. (strain WCH... [more]

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Properties
Property NameValue
Genbank descriptionC31404D12EF CTVClemen1 Citrus clementina cDNA clone C31404D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875484 ID=FC875484; Name=FC875484; organism=Citrus clementina; type=EST; length=717bp
TCGCCGGGGAATCATTTTATTTTCAGTCGCGTTAAGGATTCTCAATTTGC
TTGTAATTCTACTAAACATGGGAAACAGAGCAGAGGAGGCTAAGCAAAAT
CAAGAAGAGAACAACGGTAACATGGCCATTGAAACTCCCATCATCCCTCT
TCTCACTCCTTACAATATGGGCAGTCTCAATCTTTCTGATAGAGTTGTTT
TAGCACCACTGACTAGACAGAGATCATACAACAATGTTCCTCAGCCACAT
GCCATTTTGTATTACTCTCAAAGAACCACCAAAGGGGGTTTGCTTATAGC
CGAAGCCACTGGAGTTTCCGACACTGCTCAAGGGTATCCAGATACACCTG
GTATCTGGACAAAGGAGCAAGTTGAAGCATGGAAACCGATTGTAGATGCT
GTTCATGCCAAAGGTGGGATCTTCTTTTGTCAGATTGGGCACGTTGGCAG
GGTTTCAAATCAAGATTATCAGCCAAATGGTCAAGCTCCAATTTCCTGTA
CAGACAAGCCATTGACACCTCAAATCCGCACTAATGGTGTTGATATTGCA
CAATTCACTCCTCCAAGGCGGCTAACGACAGATGAAATCCCTCAAATTGT
GAATGATTTCAGGCTTGCTGCAAGAAATGCAATTGAGGCTGGTTTCGATG
GCATTGAGCTCCACGGTGCACATGGCTTCCTATTGACCATTTATGAAGGA
TCAGTGAATGATCGAAC
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