FC875486

Overview
NameFC875486
Unique NameFC875486
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15417 contig Ccv1_Contig15417:157..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.247e-79
Identity = 142/230 (61.74%), Postives = 178/230 (77.39%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICL DLQ+D   G  +  SDPVV++RET+  +S    +SKSPNKHNR+Y++A+P++E ++  I++G I PRDD K R++IL+++ GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV+LVEIQ PE A+GGIYSVLN+KRG V  E QRPG
Sbjct:  534 GELHLEICLSDLQNDH-AGIPLRISDPVVAYRETIQAESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIENGIINPRDDFKARARILADKHGWDVAEARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVVSEEQRPG 762          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.236e-78
Identity = 141/230 (61.30%), Postives = 180/230 (78.26%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICL+DLQDD   G  +  S PVV++RETV  +S  T +SKS NKHNR+Y++A+P++E L+ AI++G++ PRDD K R++I+++E+GWD   A+KIWCFGP+  G N+VVD  K VQYL+EIKDSVVAGFQ A+KEG +  ENMR +   + DV LHADAIHRGGGQVIPT +RV YA+ L A+P + EP++LVEIQ PE A+GGIYSVLN+KRG V  E QRPG
Sbjct:  534 GELHLEICLQDLQDDH-AGVPLKISPPVVTYRETVTNESSMTALSKSQNKHNRIYLKAQPIDEELSLAIEEGKVHPRDDFKARARIMADEYGWDVTDARKIWCFGPDGTGANLVVDQSKAVQYLHEIKDSVVAGFQLATKEGPILGENMRSVRVNILDVTLHADAIHRGGGQVIPTMKRVTYAAFLLAEPAIQEPIFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPG 762          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.697e-78
Identity = 139/230 (60.43%), Postives = 178/230 (77.39%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICL+DL+ D   G  +  S PVV++RETV  +S +T +SKSPNKHNR+Y++A P++E ++ AI++G I PRDD K R++I+++++GWD   A+KIWCFGP+  GPN+V+D  K VQYL+EIKDSVVA FQWA+KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A P++ EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPG
Sbjct:  534 GELHLEICLQDLEHDH-AGVPLKISPPVVAYRETVESESSQTALSKSPNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGWDVTDARKIWCFGPDGNGPNLVIDQTKAVQYLHEIKDSVVAAFQWATKEGPIFGEEMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLADPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPG 762          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.697e-78
Identity = 142/230 (61.74%), Postives = 175/230 (76.09%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICL DLQ+D   G  +  S P+VS+RETV  +S    +SKSPNKHNR+Y++A+P++E ++  I+ G I PRDD K R++IL++  GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV+LVEIQ PE A+GGIYSVLN+KRG V  E QRPG
Sbjct:  534 GELHLEICLSDLQNDH-AGIPLKISPPIVSYRETVNAESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIEKGVINPRDDFKARARILADNHGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPG 762          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 8.012e-78
Identity = 142/230 (61.74%), Postives = 177/230 (76.96%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICL+DL++D   G  +  S PVVS+RETV  +S    +SKSPNKHNR+Y++A+P++E ++  I++G I PRDD K R++IL+++ GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVVA FQWA+KEG +  EN R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV+LVEIQ PE A+GGIYSVLN+KRG V  E QRPG
Sbjct:  534 GELHLEICLQDLENDH-AGVPLRISPPVVSYRETVEGESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIENGVINPRDDFKARARILADKHGWDVVDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGENCRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPG 762          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.785e-77
Identity = 137/230 (59.57%), Postives = 179/230 (77.83%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICL+DL++D   G  +  S PVV++RETV  +S +  +SKSPNKHNR+Y++A+P++E ++ AI+ G+I PRDD K R++++++E+GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVV+ FQWA+KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPG
Sbjct:  534 GELHLEICLQDLENDH-AGIPLKISPPVVAYRETVEGESSQVALSKSPNKHNRIYLKAQPIDEEVSLAIEGGKINPRDDFKARARVMADEYGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVSAFQWATKEGPIFGEQMRSVRINLLDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPG 762          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.331e-77
Identity = 136/230 (59.13%), Postives = 178/230 (77.39%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICL+DL+++   G  +  S PVV++RETV  +S +  +SKSPNKHNR+Y++A P++E ++ AI+ G+I PRDD K R++++++E+GWD   A+KIWCFGP+  GPN+VVD  K VQYLNEIKDSVV+ FQWA+KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV+LVEIQ PEQA+GGIYSVLN+KRG V  E QRPG
Sbjct:  534 GELHLEICLQDLENEH-AGIPLKISPPVVAYRETVEAESSQVALSKSPNKHNRIYLKAEPMDEEVSLAIEQGKINPRDDFKARARVMADEYGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVSAFQWATKEGPILGETMRSVRVNILDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPG 762          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 283.493 bits (724), Expect = 7.499e-76
Identity = 143/231 (61.90%), Postives = 175/231 (75.76%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGR-IGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICLKDL +D   G EI  +DPVVSFRE+V E+S    +SKSPNKHNRL+M+A P+   L + I+ G  I  +DDPK R+  L++   WDK+ A  IW FGPE  G N++V++ KGVQYLNEIKDS V  FQWA+KEG + +ENMRGI F + DV LH DAIHRGGGQ+IPTARRV+YA++LTA P LLEP+YLVEI APE A+GGIYSVLN++RG V  E +R G
Sbjct:  532 GELHLEICLKDLAEDH-AGIEIKTTDPVVSFRESVSEESSIMCLSKSPNKHNRLFMKASPISMELQDLIEAGSDISSKDDPKARANYLADNHEWDKNDAMNIWSFGPEGNGANLLVNVTKGVQYLNEIKDSFVGAFQWATKEGVVCDENMRGIRFNLYDVTLHTDAIHRGGGQIIPTARRVLYAAELTASPTLLEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIG 761          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.483e-73
Identity = 131/230 (56.96%), Postives = 167/230 (72.61%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLE+CLK+LQ+D+  G  +I ++PVVSFRET+ E S    +SKS N  NRL+M A P  EGLAE I+ G I P  D K R+K LSE++GWD D A+KIWCFGP+  GPN+ VD+ KG+QYLNE+KDS+V GF  A  +G +  E +RG+   + DV LHADAIHRGG Q+IP ARR  +A  LT  P LLEP+YL EIQ PE A+GGIY+V++++RG +  E QRPG
Sbjct:  531 GELHLEVCLKELQEDYCSGVPLIVTEPVVSFRETITEPSRIQCLSKSANNQNRLFMRAFPFPEGLAEDIEAGEIKPDTDFKERAKFLSEKYGWDVDEARKIWCFGPDNCGPNLFVDVTKGIQYLNEVKDSIVNGFNNAMHDGVVCNEQIRGVRINLEDVKLHADAIHRGGAQMIPCARRCCFACVLTGAPSLLEPMYLAEIQCPESAIGGIYTVMSRRRGKIISEEQRPG 760          
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.673e-65
Identity = 121/230 (52.61%), Postives = 159/230 (69.13%), Query Frame = 2
Query:    2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691
            GELHLEICLKDLQDDFM G  I  S PVV FRE+V + +    ++KSPNKHNRLY+   P+ +GLA+ I+D ++ P  + K R++ +S  +G D +L +KIW FGP   GPN+  +   GVQYLNEIK+SVVAGF  A   G + +E  R +  ++ DV LHAD+IHRG GQ++P ARRV+  + L A+P L+EPV+L EIQ P    GGIY VL ++RGHVFEE+   G
Sbjct:  557 GELHLEICLKDLQDDFMKGTPIKISPPVVEFRESVNQATTEPGLAKSPNKHNRLYVNVEPMPDGLAQEIEDQKVTPEQEFKERARYMSTTYGMDVELMRKIWAFGPNGNGPNIFCEATHGVQYLNEIKESVVAGFGAACAAGPIVDEPCRNVLCKLMDVTLHADSIHRGMGQIMPPARRVVLGTMLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVG 786          
The following BLAST results are available for this feature:
BLAST of FC875486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
EF2_PICGU7.247e-7961.74Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_PICPA1.236e-7861.30Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_YEAST4.697e-7860.43Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_DEBHA4.697e-7861.74Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_CANAL8.012e-7861.74Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_ASHGO1.785e-7759.57Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_CANGA2.331e-7759.13Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_DICDI7.499e-7661.90Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_ENTHI3.483e-7356.96Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_BLAHO2.673e-6552.61Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC31404E02EF CTVClemen1 Citrus clementina cDNA clone C31404E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875486 ID=FC875486; Name=FC875486; organism=Citrus clementina; type=EST; length=702bp
AGGAGAACTCCATCTTGAGATCTGTTTGAAGGATTTGCAGGATGATTTCA
TGGGTGGTGCTGAGATTATCAAATCTGATCCTGTTGTGTCCTTCCGTGAA
ACTGTCCTTGAGAAGTCCTGCCGTACTGTTATGAGCAAGTCTCCAAACAA
ACACAATCGTCTCTATATGGAAGCCCGACCATTGGAGGAAGGTCTTGCCG
AGGCAATTGATGATGGTCGTATTGGTCCAAGGGATGATCCTAAGGTTCGT
TCTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTGCCAAGAA
AATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTTGTGGATA
TGTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGTTGTTGCT
GGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAAACATGAG
GGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGATGCTATCC
ACAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGTCATTTATGCA
TCCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCTACTTAGTGGA
AATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGTGTTCTTAACC
AGAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGGTCCCCACTTT
AT
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