FC875486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.806e-37 Identity = 85/227 (37.44%), Postives = 132/227 (58.15%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEF---GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFE 673 GELHLE+ + + D G E+ S+P+V +RET+ + V KSPNKHNR Y++ PL + L AI +G I + +V+ K L++ F G DKD AKK+W + ++ V+ +G+QYL+EIK+ ++ GF+ A +G LA E GI + D +H DA+HRG QV+P R+ +Y + + A+P L+EP+ V I P+ +G + +RG + E Sbjct: 439 GELHLEVIIYRINDK---GLEVETSEPIVVYRETIAG-TATNVEGKSPNKHNRFYIDIEPLSDDLMNAISEGEI---PEGRVKGKELAKTFQEHGLDKDEAKKVW----DVYKHSIFVNKTRGIQYLDEIKELLMEGFESALDDGPLANEKAMGIKISLMDAKIHEDAVHRGPAQVLPAIRKAVYGAIMLAQPTLMEPMQKVYISVPQDYMGAATREVQNRRGQIVE 654
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37 Identity = 83/230 (36.09%), Postives = 137/230 (59.57%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEF---GWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQ 682 GELHLEI + + G EI S+P+V +RETV + V KSPNKHNR Y+E P+E + +AI +G+I + +V+ K +++ F G DK+ A+++W + N+ ++M +G+QYL+EIK+ ++ GF+ A G +A+E + G+ ++ D +H DA+HRG QV+P R+ I+ + ++A+P LLEP+ V I P+ +G + +RG + Q Sbjct: 439 GELHLEIIAYRINEK---GVEIETSEPIVVYRETVAG-TAGPVEGKSPNKHNRFYIEIEPVEASVMQAIQEGKI---KEGRVKGKEMAKNFIEAGMDKEEARRVW----DVYEKNLFINMTRGIQYLDEIKELLMDGFESAMDNGPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQ 657
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.962e-37 Identity = 89/232 (38.36%), Postives = 134/232 (57.76%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILS--EEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691 GELHLE+ + +++D+ +++ S+P+V +RETV +K KSPNKHNR Y + PL E + AI DG+I K + +++ EE G D A+ + C G N+++DM KG+QYL+E + ++ F A +G LA E + G+ + D LH D+IHRG QVIP R IY + A LLEP+ V I P++ +G + + L Q+RG V E+MQ+ G Sbjct: 437 GELHLEVTIYRIKNDYK--VDVVTSEPLVVYRETV-DKKGGPFEGKSPNKHNRFYFQVEPLPENVVSAILDGKIPEGSKFKDKKAVMANLEEAGLTHDEARGLVCI----YGTNVMLDMTKGIQYLDETMELLIESFNEAMDKGPLANEKVYGLKVSLMDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAGRVLLEPMQKVFISVPQEIMGSVTNELQQRRG-VVEDMQQNG 660
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 7.586e-36 Identity = 91/233 (39.06%), Postives = 132/233 (56.65%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRD---DPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691 GELHL++ L +++D+ E+ SDP+V +RETV EK KSPNKHNR Y E PL+ + +AI+DG I D K ++L + G D+D AK + C G NM+ D+ +G+QYL+E + ++ F G LA E + G+ + D LH D+IHRG QVIP R IY + AK LLEPV V I P++ +G + + Q+RG + E+M++ G Sbjct: 437 GELHLDVTLYRIKNDYK--VEVETSDPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKALVELLVSK-GIDRDEAKGLVCVE----GTNMMFDVTRGIQYLDETMELLIEAFVEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRVLLEPVQRVFINVPQEEMGAAINEIQQRRG-IIEDMKQEG 660
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 7.586e-36 Identity = 94/230 (40.87%), Postives = 122/230 (53.04%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 691 GELHLEI ++ D G EI+ S+P+V +RETV K V KSPN+HNR Y PL E + I G I R +L + G DKD AK + G NM++DM KG+QYLNE + ++ G A G LA+E ++ + + DV LH DAIHRG QVIP R I L A LLEPV ++I P +G S + +RG VF +MQ G Sbjct: 439 GELHLEIVTGRIKRD--KGVEIVTSEPIVVYRETVTGK-VEDVEGKSPNRHNRFYFTLEPLPEEIVNLIKAGEITMNQQAIERRDVLLKA-GMDKDEAKNV----KHIKGTNMLIDMTKGIQYLNETMELIIEGINEALAGGPLADEPVQNLKMTLTDVKLHEDAIHRGPAQVIPAVRGAIKGGMLIAGDSLLEPVQKIQISVPMDQMGAATSQIQGRRGQVF-DMQSEG 659
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.294e-35 Identity = 88/230 (38.26%), Postives = 134/230 (58.26%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDP-KVRSKILSE--EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQ 682 GELH+EI K L+ + G + P+V +RETV +S V SKSPNKHN+LY PLEE + +A +GRI D K+ KI+ E + G D + AK++ C N++++M +G+ +L+E+K+ ++ GF+ A + G LA E +G+ ++ D VLH DAIHRG Q+IP AR I + + A P LLEP+ V I P+ +G ++ +RG + + Q Sbjct: 439 GELHIEIITK-LKIERDAGIPVEVGQPIVVYRETVTGQS-PVVESKSPNKHNKLYFVVEPLEESVLQAYKEGRIPDVDTKRKLDDKIVQELIKAGMDPEEAKRVMCI----YEGNVLINMTRGIVHLDEVKELIIQGFKEAMRNGPLAAEKCQGVKVKLMDAVLHEDAIHRGPAQMIPAARFGIRDAMMQANPVLLEPMQFVYINTPQDFMGAAMREISNRRGQILDMEQ 662
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.422e-35 Identity = 88/224 (39.29%), Postives = 123/224 (54.91%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFE 673 GELHLEI ++ D G +I+ S P+V +RET+ S V KSPN+HNR Y+E P++ + + I DG I R L G DKD AK + NM +DM KG+QYLNE + V+ G++ A + G LA+E ++ + + DV LH DAIHRG QVIP R + A L A LLEP+ ++I P + +G S + +RG VF+ Sbjct: 439 GELHLEIITGRIKRD--KGVDILTSPPIVVYRETITG-SVGPVEGKSPNRHNRFYIELEPMDPAIVKMILDGEISMNQQAIERRDALVAA-GMDKDEAKNVKAIE----ATNMFIDMTKGIQYLNETMELVLDGWREALRGGPLADELVQNLKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGVLMAGDSLLEPIQKIQITVPSEQMGAATSQIQGRRGQVFD 654
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.388e-35 Identity = 87/224 (38.84%), Postives = 123/224 (54.91%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFE 673 GELHLEI ++ D G EI+ S+P+V +RET K+ + KSPN+HNR Y+E PL++ + + I +G + R IL GW+KD AK I + N+ +DM KGVQYLNE + ++ G A + G LA+E ++ + + DV LH DAIHRG QVIP R + A L A LLEP+ + I P +G S + +RG V + Sbjct: 439 GELHLEIITGRIKRD--KGVEIVTSEPIVVYRETATRKA-GPIEGKSPNRHNRFYVELEPLDQVIVDLIRNGEVSMNQTWIERRDILVAN-GWEKDEAKNI----KDISTTNIFIDMTKGVQYLNETMELILEGLHEALQGGPLADEPVQNMKIRLVDVKLHEDAIHRGPAQVIPAVRSAVKAGILYAGDSLLEPIQKISITVPTDQMGNATSQIQGRRGSVLD 654
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.095e-34 Identity = 86/229 (37.55%), Postives = 130/229 (56.77%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQ 682 GELHLE+ L LQ D+ G E+ S+P+V +RE++ + S V KSPNKHNR Y+ P+ + + +AI +G I G DPK +K L+E G D D+A+ + + NM +D KG+QYLNE+ D ++ GF A EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + ++Q+RG + + Q Sbjct: 437 GELHLEVKLYKLQKDW--GIEVDVSEPIVVYRESITKPS-PIVEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLAE-LGMDYDIARGV----VDIYNGNMFLDNTKGIQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQLIDMRQ 657
BLAST of FC875486 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.095e-34 Identity = 86/229 (37.55%), Postives = 130/229 (56.77%), Query Frame = 2 Query: 2 GELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQ 682 GELHLE+ L LQ D+ G E+ S+P+V +RE++ + S V KSPNKHNR Y+ P+ + + +AI +G I G DPK +K L+E G D D+A+ + + NM +D KG+QYLNE+ D ++ GF A EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + ++Q+RG + + Q Sbjct: 437 GELHLEVKLYKLQKDW--GIEVDVSEPIVVYRESITKPS-PIVEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLAE-LGMDYDIARGV----VDIYNGNMFLDNTKGIQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQLIDMRQ 657 The following BLAST results are available for this feature:
BLAST of FC875486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875486 ID=FC875486; Name=FC875486; organism=Citrus clementina; type=EST; length=702bpback to top |