FC875492
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.495e-29 Identity = 77/188 (40.96%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 184 TAAADPEMLQDVCVAD-LTSPIKVNGF----PCKANFSEM---DFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVAEYVLTKTF 723 T A+DP+ +QD C+ +TSP + F PCK N SE+ DF L K G + PGLNTLG+S R D PG INPPH HPRATE+ +++G++ GF + N + +K +++GE V+P+GLVHFQ N G+V A+++ G NSQ G Q I +F S + E +L K F Sbjct: 22 TLASDPDPIQDFCIPKPVTSPYHDHHFSTNLPCK-NSSEVTTEDFVFSGL-KTAGNFTETGFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSNNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAF 205
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.350e-29 Identity = 71/174 (40.80%), Postives = 100/174 (57.47%), Query Frame = 1 Query: 208 LQDVCVADLTSPIKVNGFPCKA--NFSEMDFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVAEYVLTKTF 723 +QD CVAD P +G+ CK +E DF L T+N + VT A G+N LGVSLAR+D A GG+ P HTHP A+E++ V++G + GF ++AN + K++ +G++ VFP+GL+HFQ N+G PA F S G Q + LFA+ P +E V TF Sbjct: 22 VQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLP-SELVEATTF 194
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.420e-29 Identity = 72/176 (40.91%), Postives = 98/176 (55.68%), Query Frame = 1 Query: 208 LQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVAEYVLTKTFPD 729 +QD CVADL +P GF CK A+ DF L T+N + VT A V PG+N LG+S+AR+D A GG+ P HTHP A+E++ V +G + GF + N ++++KG+ VFP+GL+HFQ N G PA A F S G Q + LF + P E + TF D Sbjct: 25 VQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDNTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLP-TEVIAQTTFLD 199
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29 Identity = 72/184 (39.13%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 193 ADPEMLQDVCVADLTSP---IKVNGFPCK--ANFSEMDFFSDKLAKPVATNNT-FGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASV-IAGFNSQLQGTQNIALTLFASTPPVAEYVLTKTF 723 +DP+ LQD CV+ S I +NG CK S DF + L++P T F VT +PGLNT+G+++AR+D+ G+ PPH HPRA+E+ L+G L VGF T+ + ++ + GE FVFP+GL+HF N V +++ ++G +SQ GTQ ++L+ F S PP VL + Sbjct: 18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAY 201
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28 Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 190 AADPEMLQDVCVADLTSPIKVNGFPC-KANFSEMDFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFAST 687 A + +QD CVA+L G+PC + + F L P T N + VT V P LN LG+S AR+D AP G+ P HTHP A+E++FVL+G + GF ++AN + +++K G+ VFP+GL+HFQ N G PA+ + F+S G Q + LFA+T Sbjct: 13 ALSNDSVQDFCVANLKRAETPAGYPCIRPIHVKASDFVFSLGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISSANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQILDFALFANT 179
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28 Identity = 71/176 (40.34%), Postives = 96/176 (54.55%), Query Frame = 1 Query: 208 LQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVAEYVLTKTFPD 729 +QD CVAD +P G+ CK A + DF L T N + VT A PG+N LG+SLAR+D PGG+ P HTHP A+E++ V++G + GF + N K++KKG+ VFP+GL+HFQ N G PA F+S G Q + LF + P E + TF D Sbjct: 20 VQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASDNTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLP-TELIAQTTFLD 194
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.819e-28 Identity = 67/159 (42.14%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 208 LQDVCVADLTSPIKVNGFPCK--ANFSEMDFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLF 678 +QD CVAD +P G+ CK A + DF L T N F + VT A PG+N LG+SLAR+D PGG+ P HTHP A+E++ V++G + GF + N K++KKG+ VFP+GL+HFQ N G+ PA F+S G Q + LF Sbjct: 20 VQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASDNTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALF 178
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28 Identity = 68/166 (40.96%), Postives = 96/166 (57.83%), Query Frame = 1 Query: 205 MLQDVCVADLTSPIKVNGFPCKANFSEMDFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFT-TANVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVA 699 + QD CVADLT G+PCKA+ DF LA T+N + VT A V PG+N LG+S AR+D A GG+ P HTHP A+E++FV +G + GF T ++N + ++++ G+ VFP+GL+H+Q N G A + F+ G Q LFA+ P A Sbjct: 24 LTQDFCVADLTCSDTPAGYPCKASVGAGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANNLPSA 189
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28 Identity = 69/177 (38.98%), Postives = 105/177 (59.32%), Query Frame = 1 Query: 205 MLQDVCVADLTSPIKV-NGFPCK--ANFSEMDFFSDKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTA-NVLVSKSIKKGENFVFPRGLVHFQKNNGNVPASVIAGFNSQLQGTQNIALTLFASTPPVAEYVLTKTF 723 + QD CVA+L +G+ C+ A + DF+S LA+P F +++ +A VQ P +N LG+S +R+D PGG+ P HTHP +E+++VL+G L GF +++ N + K + KG FVFP+GL+HFQ N G+ A A ++S G Q + LFA+ P + YV+ TF Sbjct: 27 LTQDFCVANLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSSDNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQILDYALFANNLPTS-YVVKGTF 202
BLAST of FC875492 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.682e-28 Identity = 73/187 (39.04%), Postives = 106/187 (56.68%), Query Frame = 1 Query: 196 DPEMLQDVCVADLTSP-----IKVNGFPC-KANFSEMDFFS----DKLAKPVATNNTFGSTVTAANVQTIPGLNTLGVSLARIDYAPGGINPPHTHPRATEIVFVLEGQLDVGFFTTANVLVSKSIKKGENFVFPRGLVHFQKN-NGNVPASVIAGFNSQLQGTQNIALTLFASTPPVAEYVLTKTF 723 DP++L D CVAD + +NG C + D F+ + P AT F +T+T+ ++PG N G+++ARID APGG+ PPH+HPRA+E VL G + VGF T+ L ++ ++ GE FVFPR +VHF N + PA V++G NSQ G Q + + F + P + + VL K F Sbjct: 23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSP-AASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAF 208 The following BLAST results are available for this feature:
BLAST of FC875492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875492 ID=FC875492; Name=FC875492; organism=Citrus clementina; type=EST; length=733bpback to top |