FC875500
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 54/144 (37.50%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 227 INHISDSLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFR 658 I+ ++ G A RR W + D + P S+ RI+ N +YFR NY V+ VI FSLI +P SL++ GL+ WIFLY R D PL VF +R L L V++I + LT+ +++A+M GA L+ H R Sbjct: 22 ISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLR--DVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIR 163
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 2 Query: 272 RPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFR 658 RPW + D SAFS P S ++AT R+ +N ++FR+NY ++++++ +LIT P ++L + + +W FLY R ++PL +FG T + +LI LSI T V ++ V G ++ H A R Sbjct: 21 RPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFIAVGLAWFFLYFAR--EEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVGFGVLVLILHAALR 147
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1G2_ARATH (PRA1 family protein G2 OS=Arabidopsis thaliana GN=PRA1G2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.190e-17 Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 2 Query: 245 SLRYGFAQRRPWAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLIT-NPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFR 658 +L + RPW+EL FS PESFS LR + N++YF VNY +V+ AF+LIT +P +L+++ ++A W+ + FR + PL+++ +R L L++ S++ + T+ L V VG L H FR Sbjct: 27 NLTTAISSHRPWSELIFSGDFSLPESFSSLLLRSKTNFNYFFVNYTIIVSTCAAFALITASPVALIVVGAIIALWLIFHFFR--EDPLILWSFQVGDRTVLLFLVLASVWAIWFTNSAVNLAVGVSVGLLLCIIHAVFR 163
BLAST of FC875500 vs. ExPASy Swiss-Prot
Match: PR1G1_ARATH (PRA1 family protein G1 OS=Arabidopsis thaliana GN=PRA1G1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 278 WAELADRSAFSKPESFSEATLRIRKNYSYFRVNYLTVVAVVIAFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFR 658 W+E + +P SFS A R++ N +F VNY+ + A I LI +P +L+ + +A W+ LY +R D PLV++GR S+R + LI+ S++ + + LI V+ L H R Sbjct: 41 WSEFLAFGSIDRPSSFSPAVSRVKLNLHHFAVNYVLLTAASITLFLIGDPMALVTVASFVAMWLLLYFYR--DHPLVLYGRHISDRVIVFGLILGSLWALWFINSLQCLILGVVTSVLLCLVHAIIR 165 The following BLAST results are available for this feature:
BLAST of FC875500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875500 ID=FC875500; Name=FC875500; organism=Citrus clementina; type=EST; length=709bpback to top |