FC875506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_METMJ (50S ribosomal protein L3P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 54/216 (25.00%), Postives = 98/216 (45.37%), Query Frame = 2 Query: 65 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDI 712 K PR GSL + PRKRA + ++P+ + + F GYK GMTH++ + S K+ VT++E Y + G +L W L EE+ RR ++T ++++A + + K S + LA+T+ ++ G+ +K LME+++ GG++ +++ YA K+I + + E +D+ Sbjct: 3 KINRPRRGSLAYSPRKRAKSPVPRYGSWPEYTGAPAVQ--GFAGYKVGMTHVIMVDDHKSSPTEGKDVMVPVTVVEVPPMRVAGVRAYGEDTYGKHALTEAWTTDLDEELSRRI-------------NVPKNHDTAAALEAVKAAVGEGK--VSELYALAYTRPMELTGVPKKVPDLMEMRIAGGSLEDQIAYAAEILGKEITISGNLEVGEYVDV 201
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_PICTO (50S ribosomal protein L3P OS=Picrophilus torridus GN=rpl3p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 54/214 (25.23%), Postives = 92/214 (42.99%), Query Frame = 2 Query: 74 HPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 H R GS+ + PR RA R +G ++++P+ + ++ AF GYK GMTHI + S + VT++E Y + GL ++ WA+++ ++V RR K + KK I+ K VR++ HT + + G+ K + EI++ G TI ++ YA I + +D+I Sbjct: 6 HSRRGSMAYYPRVRAKRIQGDIRSWPEIEGQ--TKVQAFAGYKVGMTHIQMVDYRKNSVTAGQVIMAPVTVVEVPPLTVMSIRYYARGDNGLEVISEEWAENIDKDVLRRINK------------------INRHKKGIEV------KDVDDVRLMVHTNPQLVSGVPSKTPEIFEIRIGGSTIENRIKYAKERLGSNISFSDFSKPGNFVDVI 193
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_METBU (50S ribosomal protein L3P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14 Identity = 56/221 (25.34%), Postives = 93/221 (42.08%), Query Frame = 2 Query: 65 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKY-----ASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDI 712 K PR GSL + PRKR+ H + +++P+ D +L F GYK GMTH++ + S E VTIIET Y K G ++ W L +++ RR + A LEK++ A+ +R++ +T + G+ +K +ME V+G + K +YA + + VF +++D+ Sbjct: 3 KGHRPRRGSLAYSPRKRSQSHIPRFRSWPESDAEP--KLQGFAGYKVGMTHVIMIDDVKHSLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAEAWTDVLDKDLSRRL--------------------KTAKNPDVNASLEKLETLVESGRANDIRLITYTLPSTLTGVPKKVPDVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDV 201
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_METMA (50S ribosomal protein L3P OS=Methanosarcina mazei GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 55/211 (26.07%), Postives = 94/211 (44.55%), Query Frame = 2 Query: 77 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMID 709 P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S E VT+IET Y + G +++ WA L E++RR EG ++I +E+ + S +R + +T + + G+ +K +ME ++ + K +YA + V VF+ ++D Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRI-------------PIPAAGNQAEGLENIGKLIEEGR--VSDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYAKSILGNLVNVTDVFKNGTVVD 200
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_METBF (50S ribosomal protein L3P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl3p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 58/211 (27.49%), Postives = 92/211 (43.60%), Query Frame = 2 Query: 77 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMID 709 P+ GSL F PRKRA H + +A+P + + RL F GYK GMTH++ + S E VTIIET Y + G +++ VWA L E++RR E +I +E+ K S +R + +T + + G+ +K +ME ++ + K +YA + + VF+ +ID Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPRLQGFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAEVWATDLDPELKRRI-------------PVPKGDNMAETLGNIGKMIEEGK--VSDIRAVTYTLPKSLTGVPKKTPDIMESGISARDLNTKFEYAKSILGTLVSITDVFKTGTLID 200
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_PYRAB (50S ribosomal protein L3P OS=Pyrococcus abyssi GN=rpl3p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14 Identity = 63/223 (28.25%), Postives = 103/223 (46.19%), Query Frame = 2 Query: 65 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWA------QHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG + KE VTIIET Y + GL + V ++S++ + R + + Y D+ ++ + LE + K +V V A + +KK +ME + G ++ EK +Y K++ V V ++ E++D+I Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKE---TEVRMLGFAGYKAGMTHILMIDDEPG-LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYVSKKAKGRKF-TFYQLLKRRIATLPKNYTKDDFEQKL-GNLEDMIKEGEIVEVRALVATQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVI 219
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_HALWD (50S ribosomal protein L3P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl3p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 54/213 (25.35%), Postives = 91/213 (42.72%), Query Frame = 2 Query: 77 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEK--QIPVDAVFQKDEMID 709 PR GS+GF PRKRA +++++ +D + + F GYKAGMT ++ ++ S E VT++ET Y TP G + L VW + + R +E D A+ I VR++ HT M+ + +K +ME +V GGT+ ++V++ + + +F+ E +D Sbjct: 7 PRKGSMGFSPRKRAESEVPRIRSWASNDGAPGVQ--GFAGYKAGMTQVLMVNDEANSPREGMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTEVWGREFDTSLERTL-----------DLPNEDTFEDDAAALRDDAETGDIDD----VRLITHTLPAGMRNIPKKTPDVMETRVGGGTLTDRVEFGLDLISDGGEHEISDIFRAGEYLD 202
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_METAC (50S ribosomal protein L3P OS=Methanosarcina acetivorans GN=rpl3p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14 Identity = 55/211 (26.07%), Postives = 94/211 (44.55%), Query Frame = 2 Query: 77 PRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMID 709 P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S E VT+IET Y + G +++ VWA L E++RR E ++I +E+ + S VR + +T + + G+ +K +ME ++ + K +Y+ + V VF+ ++D Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRRI-------------PIPAAGNQAEALENIGKLIEEGR--VSDVRAVIYTLPKSLTGVPKKVPDIMESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVD 200
BLAST of FC875506 vs. ExPASy Swiss-Prot
Match: RL3_THESM (50S ribosomal protein L3P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl3p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 60/219 (27.40%), Postives = 94/219 (42.92%), Query Frame = 2 Query: 65 KFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQ--HLSEEVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDII 715 + PR GSL + PRKRA +++ +P++ + R+ F GYKAGMTH++ + PG KE VTI+E Y + GL + V L +R + T+E + +LE + K VV + A + +KK +ME V G +I EK +Y K+I V + Q+ E++DI+ Sbjct: 3 RISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG-LTKGKEIFVPVTIVEAPPLMVYGIRAYKRGYFGLETATEVIVPDFKLENYPSKRAKNVTFYKLLERRIKTLPKNYTEEVFQQKLGELEDLVKTGEVVELRALVATQPWLARIKKKPEVMEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIV 217 The following BLAST results are available for this feature:
BLAST of FC875506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875506 ID=FC875506; Name=FC875506; organism=Citrus clementina; type=EST; length=715bpback to top |