FC875507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875507 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20 Identity = 67/192 (34.90%), Postives = 86/192 (44.79%), Query Frame = 3 Query: 108 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWR-DAPGGEYAWGYCFISEISPPSPYCNLNYPCRG--KYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSXQSAIWFWMT 641 NC SG G T G G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ REIAAFFA HETT + G+ YC + + YPC KYYGRGP+QL+WNYNY ATD S ++A+WFWMT Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAA--------QYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233
BLAST of FC875507 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18 Identity = 59/177 (33.33%), Postives = 84/177 (47.46%), Query Frame = 3 Query: 111 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLNYPCRGKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSXQSAIWFWM 638 CG G G D G + I+++E F D + + CP + FYT F+EA A+P FG + R REIAA+FA HET +A YC S+ P CN N +Y+GRGP+QL+WNYNY+ DP++S ++++WFW+ Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPN----KEYFGRGPMQLSWNYNYI--DAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190
BLAST of FC875507 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-17 Identity = 62/191 (32.46%), Postives = 85/191 (44.50%), Query Frame = 3 Query: 111 CGSGVVCGERDTGHGTDGGELG---------KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYCNLN---YPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSXQSAIWFWM 638 C SG G G G GG G + + E F + + + C + FYT +F+ AA ++ F REIAAFFA HET C+I+EI+ S YC+ N +PC+ KYYGRGP+Q++WNYNY A DP +S ++A+WFWM Sbjct: 57 CRSGPCYGGGGGGGGGGGGGGGGGGGSGVSVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM 232
BLAST of FC875507 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 50/141 (35.46%), Postives = 70/141 (49.65%), Query Frame = 3 Query: 234 CPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYC---NLNYPCR--GKYYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSXQSAIWFWM 638 C + FYT +F+ AA+++ F N REIAAFFA HET C+I+EI+ + YC N +PC+ KYYGRGP+Q++WN+NY A DP +S ++A+WFWM Sbjct: 104 CAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229
BLAST of FC875507 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 59/183 (32.24%), Postives = 81/183 (44.26%), Query Frame = 3 Query: 111 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPS-PYCN----LNYPCRGK--YYGRGPIQLTWNYNYLRCXXXXXXXXXXXXXXXXXATDPVLSXQSAIWFWM 638 CG+G G T + I F + + + D C + FYT DAF+ A ++ FG G+E REIAA FA HET +C+I EI S YC+ YPC Y+GRGPIQL+WN+NY + D V+S ++A+W+WM Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of FC875507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875507 ID=FC875507; Name=FC875507; organism=Citrus clementina; type=EST; length=706bpback to top |