FC875516 | Citrus Genome Database

Overview


Name	FC875516
Unique Name	FC875516
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	716

Libraries


Library Name	Type
CTVClemen1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig10247	contig	Ccv1_Contig10247:1..716.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.249e-25
Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = 3

Query:  120 ALADDVVVLTEDNFEKEV---GQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKS-------KDVLVEFYAPWCGHCKNLAPTY 605
            A A DV+ LT+DNFE  +   G     LVEF+APWCGHCKKLAPEYE      K    V + KVDC  + + C+KYGV GYPT++ F  G  E   Y+GPR+A+ +  ++  + G        P++V + + + F++ + DK        KD+  E ++ +     NL   Y
Sbjct:   22 AAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYEAAATRLKGI--VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE-ESGAYDGPRTADGIVSHLKKQAG--------PASVPLKSEEEFEKFISDKDASVVGFFKDLFSEAHSEFLKAASNLRDNY 182

HSP 2 Score: 87.8113 bits (216), Expect = 6.214e-17
Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLE-PKKYEGPRSAEALAEYVNNE 449
            V V+  +NF++ V  +++  L+EFYAPWCGHCK L P+Y++LG   +K  +++I K+D   +  + S Y V+G+PTI + P    + PKKYEG R       Y+  E
Sbjct:  378 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKQNPKKYEGGRELSDFISYLKRE 483

HSP 3 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 3

Query:  402 EGPRSAEALAEYVNNEGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +G      L +Y +      +K   +P +    V V+ A+NFDEIV +++KDVL+EFYAPWCGHCKNL P Y+++      + ++V+A +DA    D+   Y V GFPT
Sbjct:  345 DGKALERFLEDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIAKMDATA-NDVPSPYEVRGFPT 452

HSP 4 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3

Query:  474 AVPSNVVVLTADNFDEIVLDKSKD--VLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            A  S+V+ LT DNF+  + D      +LVEF+APWCGHCK LAP YE  AAA  L+  V +A +D     +   KYGVSG+PT
Sbjct:   22 AAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPT 102

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 64/157 (40.76%), Postives = 89/157 (56.69%), Query Frame = 3

Query:   99 LTLFFVSAL---ADDVVVLTEDNFEKEVGQDRGA---LVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVL 551
            + L   SAL   A DV+ LT++NFE  V     A   LVEF+APWCGHCK+LAPEYE      K    V + KVDC  + + C+KYGV GYPT++ F  G  E   Y+GPR+A+ +  ++  + G        P++V + T D F + + DK   V+
Sbjct:   12 VALLLASALLASASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIVSHLKKQAG--------PASVPLRTEDEFKKFISDKDASVV 157

HSP 2 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKG-SLEPKKYEGPRSAEALAEYVNNE 449
            V V+  ++F+  V  +D+  L+EFYAPWCGHCK L P+Y++LG    K  +++I K+D   +  + S Y V+G+PTI + P    L PKKYEG R       Y+  E
Sbjct:  378 VKVVVAESFDDIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYLQRE 483

HSP 3 Score: 84.7297 bits (208), Expect = 5.261e-16
Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 3

Query:  402 EGPRSAEALAEYVNNEGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +G      L EY +      +K   +P      V V+ A++FD+IV  + KDVL+EFYAPWCGHCKNL P Y+++    + + ++V+A +DA    D+   Y V GFPT
Sbjct:  345 DGKALERFLQEYFDGNLKRYLKSEPIPETNEGPVKVVVAESFDDIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-NDVPSPYEVKGFPT 452

HSP 4 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 3

Query:  468 IAAVPSNVVVLTADNFDEIVLDKSKD--VLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            + A  S+V+ LT +NF+  V D      +LVEF+APWCGHCK LAP YE  AAA  L+  V +A +D     +   KYGVSG+PT
Sbjct:   20 LLASASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPT 102

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 61/147 (41.50%), Postives = 85/147 (57.82%), Query Frame = 3

Query:  120 ALADDVVVLTEDNFEKEVGQDRGA---LVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVL 551
            A A DV+ LT+DNFE  V     A   LVEF+APWCGHCK+LAPEYE      K    V + KVDC  + + C+KYGV GYPT++ F  G  E   Y+GPR+A+ +  ++  + G        P++V + T + F + + DK   V+
Sbjct:   22 AAASDVLELTDDNFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIVSHLKKQAG--------PASVPLRTEEEFKKFISDKDASVV 157

HSP 2 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKG-SLEPKKYEGPRSAEALAEYVNNE 449
            V V+  +NF++ V  +++  L+EFYAPWCGHCK L P+Y++LG    K  +++I K+D   +  + S Y V+G+PTI + P    L PKKYEG R       Y+  E
Sbjct:  378 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQRE 483

HSP 3 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 3

Query:  402 EGPRSAEALAEYVNNEGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +G      L +Y +      +K   +P +    V V+ A+NFDEIV +++KDVL+EFYAPWCGHCKNL P Y+++    + + ++V+A +DA    D+   Y V GFPT
Sbjct:  345 DGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-NDVPSPYEVRGFPT 452

HSP 4 Score: 77.0258 bits (188), Expect = 1.097e-13
Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 3

Query:  474 AVPSNVVVLTADNFDEIVLDKSKD--VLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            A  S+V+ LT DNF+  V D      +LVEF+APWCGHCK LAP YE  AAA  L+  V +A +D     +   KYGVSG+PT
Sbjct:   22 AAASDVLELTDDNFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPT 102

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.747e-25
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 3

Query:  120 ALADDVVVLTEDNFEKEVGQDRGA---LVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVL 551
            A A DV+ LT+DNFE  +     A   LVEF+APWCGHCK+LAPEYE      K    V + KVDC  + + C+KYGV GYPT++ F  G  E   Y+GPR+A+ +  ++  + G        P++V + T + F + + DK   ++
Sbjct:   22 AAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIVSHLKKQAG--------PASVPLRTEEEFKKFISDKDASIV 157

HSP 2 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKG-SLEPKKYEGPRSAEALAEYVNNE 449
            V V+  +NF++ V  +++  L+EFYAPWCGHCK L P+Y++LG    K  +++I K+D   +  + S Y V+G+PTI + P    L PKKYEG R       Y+  E
Sbjct:  378 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQRE 483

HSP 3 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 3

Query:  402 EGPRSAEALAEYVNNEGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +G      L +Y +      +K   +P +    V V+ A+NFDEIV +++KDVL+EFYAPWCGHCKNL P Y+++    + + ++V+A +DA    D+   Y V GFPT
Sbjct:  345 DGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-NDVPSPYEVRGFPT 452

HSP 4 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3

Query:  474 AVPSNVVVLTADNFDEIVLDKSKD--VLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            A  S+V+ LT DNF+  + D      +LVEF+APWCGHCK LAP YE  AAA  L+  V +A +D     +   KYGVSG+PT
Sbjct:   22 AAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPT 102

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 114.775 bits (286), Expect = 4.747e-25
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 3

Query:  120 ALADDVVVLTEDNFEKEVGQDRGA---LVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVL 551
            A A DV+ LT+DNFE  +     A   LVEF+APWCGHCK+LAPEYE      K    V + KVDC  + + C+KYGV GYPT++ F  G  E   Y+GPR+A+ +  ++  + G        P++V + T + F + + DK   ++
Sbjct:   22 AAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIVSHLKKQAG--------PASVPLRTEEEFKKFISDKDASIV 157

HSP 2 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKG-SLEPKKYEGPRSAEALAEYVNNE 449
            V V+  +NF++ V  +++  L+EFYAPWCGHCK L P+Y++LG    K  +++I K+D   +  + S Y V+G+PTI + P    L PKKYEG R       Y+  E
Sbjct:  378 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQRE 483

HSP 3 Score: 88.1965 bits (217), Expect = 4.758e-17
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 3

Query:  402 EGPRSAEALAEYVNNEGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +G      L +Y +      +K   +P +    V V+ A+NFDEIV +++KDVL+EFYAPWCGHCKNL P Y+++    + + ++V+A +DA    D+   Y V GFPT
Sbjct:  345 DGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-NDVPSPYEVRGFPT 452

HSP 4 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3

Query:  474 AVPSNVVVLTADNFDEIVLDKSKD--VLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            A  S+V+ LT DNF+  + D      +LVEF+APWCGHCK LAP YE  AAA  L+  V +A +D     +   KYGVSG+PT
Sbjct:   22 AAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPT 102

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA3_MOUSE (Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 3

Query:  120 ALADDVVVLTEDNFEKEVGQDRGA---LVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVL 551
            A A DV+ LT++NFE  V     A   LVEF+APWCGHCK+LAPEYE      K    V + KVDC  + + C+KYGV GYPT++ F  G  E   Y+GPR+A+ +  ++  + G        P++V + T + F + + DK   V+
Sbjct:   22 AAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIVSHLKKQAG--------PASVPLRTEEEFKKFISDKDASVV 157

HSP 2 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 3

Query:  402 EGPRSAEALAEYVNNEGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +G    + L EY +      +K   +P +    V V+ A+NFD+IV ++ KDVL+EFYAPWCGHCKNL P Y+++    + + ++V+A +DA    D+   Y V GFPT
Sbjct:  345 DGKALEQFLQEYFDGNLKRYLKSEPIPESNEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-NDVPSPYEVKGFPT 452

HSP 3 Score: 89.3521 bits (220), Expect = 2.136e-17
Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVGQ-DRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKG-SLEPKKYEGPRSAEALAEYVNNE 449
            V V+  +NF+  V + D+  L+EFYAPWCGHCK L P+Y++LG    K  +++I K+D   +  + S Y V+G+PTI + P    L PKKYEG R       Y+  E
Sbjct:  378 VKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVKGFPTIYFSPANKKLTPKKYEGGRELNDFISYLQRE 483

HSP 4 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3

Query:  474 AVPSNVVVLTADNFDEIVLDKSKD--VLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            A  S+V+ LT +NF+  V D      +LVEF+APWCGHCK LAP YE  AAA  L+  V +A +D     +   KYGVSG+PT
Sbjct:   22 AAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPT 102

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA5_RAT (Protein disulfide-isomerase A5 OS=Rattus norvegicus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 72/207 (34.78%), Postives = 114/207 (55.07%), Query Frame = 3

Query:  126 ADDVVVL-TEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIG-KVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVP-----SNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAF--TLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            A DVV + +E +F + +  +++  L+ FYAPWC  CK++ P ++K  A+  +  +VL G  V   E +++  +Y V+GYPTI +F KG    +      +AE + E++ N      ++   P      +V  LT ++FD+ V + S  VLV F+APWCGHCK + P +E  A       E   V+A +DA     LAE++ +S FPT
Sbjct:  148 AKDVVHIDSEKDFRRLLKKEEKPLLMMFYAPWCSMCKRIMPHFQK-AATQVRGHTVLAGMNVYPPEFENIKEEYNVRGYPTICYFEKGRFLFQYENYGSTAEDIVEWLKNPQPPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHS-SVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDATINEALAERFHISAFPT 352

HSP 2 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 64/198 (32.32%), Postives = 101/198 (51.01%), Query Frame = 3

Query:  144 LTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASF--KKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGG---TNVKIAAVPSNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDA--DKYXDLAEKYGVSGFPT 716
            LT+++F++ V +    LV F+APWCGHCKK+ PE+E            S ++  VD   +++L  ++ +  +PT+++F  G  E +     R+ +   E++ N               ++V+ L  DNF E  L K K  LV FYAPWC HCK + P +   A AF  +  +  A +D   DK  DL ++  V  +PT
Sbjct:  279 LTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDATINEALAERFHISAFPTLKYFKNG--EQQAVPALRTKKKFIEWMQNPEAPPPPEPTWEEQQTSVLHLVGDNFRE-TLKKKKHTLVMFYAPWCPHCKKVIPHFTATADAFKDDRKIACAAVDCVKDKNQDLCQQESVKAYPT 473

HSP 3 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDC--DEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYV 440
            V+ L  DNF + + + +  LV FYAPWC HCKK+ P +     +FK  + +    VDC  D+++ LC +  V+ YPT  ++  G L  +KYE  R+      ++
Sbjct:  397 VLHLVGDNFRETLKKKKHTLVMFYAPWCPHCKKVIPHFTATADAFKDDRKIACAAVDCVKDKNQDLCQQESVKAYPTFHYYHYGKL-VEKYESDRTELGFTSFI 499

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA3_CHICK (Protein disulfide-isomerase A3 OS=Gallus gallus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 72/202 (35.64%), Postives = 109/202 (53.96%), Query Frame = 3

Query:  105 LFFVSALADDVVVLTEDNFEKEVGQDRG-ALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSG 707
            L  +SA A DVV L++ +FE  + +  G  LVEF+APWCGHCK+LAPEYE      K    V + KVDC  + + C+KYGV GYPT++ F  G  E   Y+GPR+A+ +  ++  + G        P++V + +  +F++ + DK   V V F+    G   +     E + AA  L D+   A+   ++   L +KY   G
Sbjct:   17 LLALSAGASDVVELSDADFESGLAERPGLVLVEFFAPWCGHCKRLAPEYEAAATRLKGI--VPLVKVDCTANSNTCNKYGVSGYPTLKIFRDGE-ESGTYDGPRTADGIVSHLKKQAG--------PASVALSSVADFEKFIGDKDASV-VGFFRDASGDAYS-----EFMKAANNLRDNYRFAHTSEEQ---LVQKYEEDG 198

HSP 2 Score: 91.6633 bits (226), Expect = 4.304e-18
Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLE-PKKYEGPRSAEALAEYVNNE 449
            V V+  +NF++ V  +D+  L+EFYAPWCGHCK L P+Y++LG    K  +++I K+D   +  + S Y V+G+PTI + P G  + PKKYEG R       Y+  E
Sbjct:  376 VKVVVAENFDEIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFAPAGKKQSPKKYEGGREVSDFISYLKRE 481

HSP 3 Score: 88.9669 bits (219), Expect = 2.789e-17
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 3

Query:  402 EGPRSAEALAEYVNNEGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +G      L +Y +      +K   VP N    V V+ A+NFDEIV  + KDVL+EFYAPWCGHCKNL P Y+++    + + ++V+A +DA    D+   Y V GFPT
Sbjct:  343 DGKALERFLQDYFDGNLKKYLKSEPVPENNDGPVKVVVAENFDEIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA-NDVPSPYEVRGFPT 450

HSP 4 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 3

Query:  468 IAAVPSNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            ++A  S+VV L+  +F+  + ++   VLVEF+APWCGHCK LAP YE  AAA  L+  V +  +D     +   KYGVSG+PT
Sbjct:   20 LSAGASDVVELSDADFESGLAERPGLVLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLVKVDCTANSNTCNKYGVSGYPT 100

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: PDIA5_MOUSE (Protein disulfide-isomerase A5 OS=Mus musculus GN=Pdia5 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.953e-24
Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 3

Query:  144 LTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASF--KKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGG---TNVKIAAVPSNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDA--DKYXDLAEKYGVSGFPT 716
            LT+++F++ V +    LV F+APWCGHCKK+ PE+E            S ++  VD   +++L  ++ +  +PT+++F  G  E +     R+ +   E++ N               ++V+ L  DNF +  L K K  LV FYAPWC HCK + P +   A AF  +  +  A +D   DK  DL ++  V  +PT
Sbjct:  279 LTDEDFDQFVKEHSSVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDATVNEALAGRFHISAFPTLKYFKNG--EQQAVPALRTKKKFIEWMQNPEAPPPPEPTWEEQQTSVLHLVGDNFRD-TLKKKKHTLVMFYAPWCPHCKKVIPHFTATADAFKEDRKIACAAVDCVKDKNQDLCQQEAVKAYPT 473

HSP 2 Score: 107.842 bits (268), Expect = 5.803e-23
Identity = 74/208 (35.58%), Postives = 115/208 (55.29%), Query Frame = 3

Query:  126 ADDVVVL-TEDNFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIG-KVDCDEHKSLCSKYGVQGYPTIQWFPKGS-LEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVP-----SNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAF--TLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            A DVV + +E +F + +  +++  L+ FYAPWC  CK++ P ++K  A+  +   VL G  V   E +++  +Y V+GYPTI +F KG  L P +  G  +AE + E++ N      ++   P      +V  LT ++FD+ V + S  VLV F+APWCGHCK + P +E  A       E   V+A +DA     LA ++ +S FPT
Sbjct:  148 AKDVVHIDSEKDFRRLLKREEKPLLMMFYAPWCSMCKRIMPHFQK-AATQVRGHIVLAGMNVYPSEFENIKEEYNVRGYPTICYFEKGRFLFPYENYG-STAEDIVEWLKNPLPPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHS-SVLVMFHAPWCGHCKKMKPEFESAAEVLHGDAESSGVLAAVDATVNEALAGRFHISAFPT 352

HSP 3 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 36/104 (34.62%), Postives = 57/104 (54.81%), Query Frame = 3

Query:  135 VVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDC--DEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYV 440
            V+ L  DNF   + + +  LV FYAPWC HCKK+ P +     +FK+ + +    VDC  D+++ LC +  V+ YPT  ++  G L  +KYE  R+      ++
Sbjct:  397 VLHLVGDNFRDTLKKKKHTLVMFYAPWCPHCKKVIPHFTATADAFKEDRKIACAAVDCVKDKNQDLCQQEAVKAYPTFHYYHYGKL-VEKYESDRTELGFTSFI 499

[Close]

BLAST of FC875516 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.169e-23
Identity = 76/222 (34.23%), Postives = 110/222 (49.55%), Query Frame = 3

Query:  105 LFFVS-ALADDVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFK-KAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEI--VLDKSKDVLVEFY----------APWCGHCKNLAPT--------YEKVAAAFTLEDDVVV--ANLDADKYXDLAEKYG 698
            LF V+ A    V+ LT+DNF  E+     ALV+FYAPWCGHCKKLAPE+         K   V + KVDC   +S+CS++GV GYPT++ F  G L+  +Y GPR+A  +A Y+ +  G   K  +  S+V  + +D+   +   +  S D L++ +          A +C    NL  T        Y         EDD  V    L+++   D   K+G
Sbjct:    8 LFLVAFASCSKVLELTKDNFHSELKSIPVALVKFYAPWCGHCKKLAPEFTSAAQIISGKTNDVKLVKVDCTTQESICSEFGVSGYPTLKIFRNGDLD-GEYNGPRNANGIANYMISRAGPVSKEVSTVSDVENVLSDDKPTVFAFVKSSSDPLIKTFMALAKSMVDDAVFCHSHNNLFVTPSDNELRVYLPKRLRTKFEDDFAVYKGELESNNIKDWIRKHG 228

HSP 2 Score: 80.4925 bits (197), Expect = 9.921e-15
Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 3

Query:  270 KKAKSVLIGKVDCDEHKSLCSKYGVQG--YPTIQWFPKGSLEPKKYEGPR-SAEALAEYVNN-EGGT---NVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYXDLAEKYGVSGFPT 716
            +K K+++      D+     S YG++    P +    K     KKY+  + S +A ++++N  E G    +VK   +P++    V  L A NFDEIV ++ KDV+V F+A WCGHCKNL P YE+ A+    E ++V+A +DA    D+   Y V GFPT
Sbjct:  280 QKFKNLVFAYSFADDFSYEISDYGIEADKLPAVVIQSKD----KKYKLEKFSLDAFSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATA-NDVPSPYQVRGFPT 434

HSP 3 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 35/100 (35.00%), Postives = 58/100 (58.00%), Query Frame = 3

Query:  156 NFEKEVG-QDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKG-SLEPKKYEGPRSAEALAEYVNNE 449
            NF++ V  +++  +V F+A WCGHCK L P+YE+  +  K   ++++  +D   +  + S Y V+G+PTI + PKG    P  YEG R    + +Y+  E
Sbjct:  367 NFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATAN-DVPSPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYLARE 465

The following BLAST results are available for this feature:

BLAST of FC875516 vs. ExPASy Swiss-Prot

BLAST of FC875516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79


Match Name	E-value	Identity	Description
PDIA3_BOVIN	1.249e-25	37.79	Protein disulfide-isomerase A3 OS=Bos taurus GN=PD...	[more]
PDIA3_RAT	2.783e-25	40.76	Protein disulfide-isomerase A3 OS=Rattus norvegicu...	[more]
PDIA3_CERAE	2.783e-25	41.50	Protein disulfide-isomerase A3 OS=Cercopithecus ae...	[more]
PDIA3_PONAB	4.747e-25	40.14	Protein disulfide-isomerase A3 OS=Pongo abelii GN=...	[more]
PDIA3_HUMAN	4.747e-25	40.14	Protein disulfide-isomerase A3 OS=Homo sapiens GN=...	[more]
PDIA3_MOUSE	8.097e-25	40.82	Protein disulfide-isomerase A3 OS=Mus musculus GN=...	[more]
PDIA5_RAT	4.019e-24	34.78	Protein disulfide-isomerase A5 OS=Rattus norvegicu...	[more]
PDIA3_CHICK	4.019e-24	35.64	Protein disulfide-isomerase A3 OS=Gallus gallus GN...	[more]
PDIA5_MOUSE	8.953e-24	31.82	Protein disulfide-isomerase A5 OS=Mus musculus GN=...	[more]
ERP60_SCHMA	1.169e-23	34.23	Probable protein disulfide-isomerase ER-60 OS=Schi...	[more]

Pages

Properties


Property Name	Value
Genbank description	C31404G09EF CTVClemen1 Citrus clementina cDNA clone C31404G09, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC875516 ID=FC875516; Name=FC875516; organism=Citrus clementina; type=EST; length=716bp
GGAGCGGAGTAAAAACCAAAATACCTGCACAGGGGGAAAAAAAAAAAATA
AGAAAGAGAGAAATGGAGAGGTATCAGATCTGGCTAGCTCTAGGCACTTT
AACCTTGTTCTTCGTATCAGCTCTAGCGGACGATGTCGTTGTGCTAACAG
AAGACAACTTCGAGAAGGAGGTTGGTCAGGACAGGGGAGCTCTTGTTGAG
TTTTACGCTCCTTGGTGTGGCCACTGTAAAAAGCTTGCTCCAGAGTATGA
GAAACTTGGTGCAAGCTTTAAGAAAGCAAAGTCTGTCTTGATTGGAAAGG
TGGACTGTGACGAGCATAAGAGCTTATGCAGCAAATATGGTGTTCAAGGA
TACCCAACAATTCAATGGTTTCCTAAAGGTTCTTTGGAACCCAAAAAGTA
TGAAGGGCCACGATCTGCTGAAGCCCTTGCTGAGTATGTGAATAATGAAG
GAGGAACCAATGTGAAGATAGCTGCAGTCCCATCCAATGTGGTGGTACTA
ACAGCCGATAATTTTGATGAGATAGTTTTGGACAAAAGCAAAGATGTTTT
GGTTGAATTTTATGCACCATGGTGTGGCCATTGCAAAAACCTTGCGCCTA
CATATGAAAAGGTGGCAGCCGCATTTACATTGGAAGATGATGTAGTTGTT
GCTAATTTGGATGCTGACAAATACNAGGATCTGGCTGAGAAGTATGGAGT
TAGTGGATTTCCTACA