FC875533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875533 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 60/162 (37.04%), Postives = 80/162 (49.38%), Query Frame = 1 Query: 238 YPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLP---EKLSEFVTRV 714 Y I++DTEFP + +H Y + +VD LIQ+GLTL D G + G T WE NF DF + A S+E L+R G+D K RE GI F + +++TWVTFH +YD YL+K T LP E+ S+ V RV Sbjct: 11 YRFIAIDTEFPSTL---RETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI-----GGT---WEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARV 160
BLAST of FC875533 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 65/182 (35.71%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 178 EVFEFNLISEFERIRALIDRYPIISMDTEFPGVV----VRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKD--VTWVTFHSAYDFGYLVKCLT-QRVLPEKLSEF 702 EV+ +N E IR + I++DTEFPG + + IR+RD +K NVD +LIQ+G TL D G WE N DFD + S+ LK G++ +K RE GI F S ++ KD +TWV F +YD YLVK LT + LPE EF Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRD-------MKFNVDNTHLIQLGFTLFDRRGFAKT---------WEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDF--SQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEF 171
BLAST of FC875533 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15 Identity = 63/182 (34.62%), Postives = 87/182 (47.80%), Query Frame = 1 Query: 178 EVFEFNLISEFERIRALIDRYPIISMDTEFPGVV----VRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKD--VTWVTFHSAYDFGYLVKCLT-QRVLPEKLSEF 702 EV+ +N E + IR + + I++DTEFPG + + IR+RD +K NVD +LIQ+G TL D G WE N DF+ + S+ LK G++ +K E GI F S ++ KD +TWV F +YD YLVK LT + LPE EF Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRD-------MKFNVDNTHLIQLGFTLFDRRGITKT---------WEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDF--SQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEF 166 The following BLAST results are available for this feature:
BLAST of FC875533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875533 ID=FC875533; Name=FC875533; organism=Citrus clementina; type=EST; length=728bpback to top |