FC875537

Overview
NameFC875537
Unique NameFC875537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:202..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.032e-60
Identity = 104/210 (49.52%), Postives = 148/210 (70.48%), Query Frame = 3
Query:   30 KNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            +N  +++F+S ++++  LA+Y + +S    KE+G F + LSGG L+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLS+VPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS
Sbjct:   13 RNNEIRIFESSDEMSTDLAEYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKS 222          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.292e-59
Identity = 107/217 (49.31%), Postives = 149/217 (68.66%), Query Frame = 3
Query:    9 MAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            +A+    KN  +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLS+VPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+
Sbjct:   23 VASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKA 239          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 2.292e-59
Identity = 107/217 (49.31%), Postives = 149/217 (68.66%), Query Frame = 3
Query:    9 MAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            +A+    KN  +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLS+VPI  G+VY+IND ++ E AA DYE  ++ L K   +  S +   PKFDL+LL +G DGH+ASLFP HP L+  + WVT+I DSP PPPERITFT PVINS++ IA+V  G  K+
Sbjct:   23 VASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKA 239          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_MOUSE (6-phosphogluconolactonase OS=Mus musculus GN=Pgls PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.489e-38
Identity = 89/213 (41.78%), Postives = 123/213 (57.75%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSVQFK 671
            + VF S ++L  SLA+  A  +A     ++G F + LSGGSL+  L + +      +    +A+W + + DER+VP DH +S Y L     LS++PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  I  V  G GK+   K
Sbjct:    9 ISVFSSPQELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAV--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLK 213          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_RAT (6-phosphogluconolactonase OS=Rattus norvegicus GN=Pgls PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.888e-37
Identity = 88/213 (41.31%), Postives = 123/213 (57.75%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSVQFK 671
            + VF S ++L  SLA+  A  +A      +G F + LSGGSL+  L + +      +    +A+W + + DER+VP DH +S Y L     LS++PI    V  I+ AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFPGHPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK+   K
Sbjct:    9 ISVFSSPQELGASLAQLVAQRAASCLEGNRGRFALGLSGGSLVSMLARDLPAATAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTIDPALPVEDAAEDYARKLRQAFQGDTV--------PVFDLLILGVGPDGHTCSLFPGHPLLQEREKIVAPIGDSPKPPPQRVTLTLPVLNAAQSVIFVATGEGKAAVLK 213          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_BOVIN (6-phosphogluconolactonase OS=Bos taurus GN=PGLS PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.932e-36
Identity = 87/213 (40.85%), Postives = 122/213 (57.28%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGS-FTVVLSGGSLIDSLRKLVEPPYVDS--IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSVQFK 671
            + VF S ++L  SLA+     +A    + G+ FT+ LSGGSL+  L + +      +     A+W + + DER+VP +H +S Y L     LS++PI    V  IN AL  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK+   K
Sbjct:    9 ISVFSSPQELGASLAQLVVQQAACCLADAGARFTLGLSGGSLVSMLARELPAAAAPAGPASLARWTLGFCDERLVPFEHAESTYGLYRTHLLSKLPIFDSQVITINPALPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIYVATGEGKAAILK 213          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_HUMAN (6-phosphogluconolactonase OS=Homo sapiens GN=PGLS PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 88/215 (40.93%), Postives = 121/215 (56.28%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAK-FGKEKGSFTVVLSGGSLIDSLRK----LVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSVQFK 671
            + VF S ++L  +LA+  A  +A      +  F + LSGGSL+  L +     V P    S+  A+W + + DER+VP DH +S Y L     LS++PI    V  IN  L  E AAEDY   L+   + + +        P FDL++LG+GPDGH  SLFP HPLL+E EK V  I DSPKPPP+R+T T PV+N++  +  V  G GK+   K
Sbjct:    9 ISVFSSSQELGAALAQLVAQRAACCLAGARARFALGLSGGSLVSMLARELPAAVAPAGPASL--ARWTLGFCDERLVPFDHAESTYGLYRTHLLSRLPIPESQVITINPELPVEEAAEDYAKKLRQAFQGDSI--------PVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAARTVIFVATGEGKAAVLK 213          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_SCHPO (Probable 6-phosphogluconolactonase OS=Schizosaccharomyces pombe GN=SPCC16C4.10 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 87/216 (40.28%), Postives = 116/216 (53.70%), Query Frame = 3
Query:   39 NVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNY----KLAYDGFLSQVPITTGNVYAINDALSAEG------AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            +V  F     +A +L  +  + S    K  G FT+ LSGGSL   L + +       IE++KW VF+ DER+VP D ++SNY    KL +D F    P     ++ IN  L  E        A++YE  L H     + A S+    P FDL+LLG GPDGH  SLFP H +L+E+  WV  + DSPKPP +RIT T PV+  +  IA V  GAGK
Sbjct:    2 SVYSFSDVSLVAKALGAFVKEKSEASIKRHGVFTLALSGGSLPKVLAEGLAQQR--GIEFSKWEVFFADERIVPLDDENSNYALCKKLIFDKFEGFDP---KKIHTINPELLKENPIDPQNVADEYEKQLVH-----VFANSSTVKVPVFDLLLLGCGPDGHTCSLFPDHEVLQEDVAWVAPVTDSPKPPKDRITLTLPVVTHAQAIAFVTTGAGK 207          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCTU (6-phosphogluconolactonase OS=Mycobacterium tuberculosis GN=pgl PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.191e-29
Identity = 77/211 (36.49%), Postives = 110/211 (52.13%), Query Frame = 3
Query:   33 NKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            + ++++F   + L  +  K            +G   +VL+GG    +L + +       IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+
Sbjct:    2 SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQ-AQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKA 207          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCBO (6-phosphogluconolactonase OS=Mycobacterium bovis GN=pgl PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.191e-29
Identity = 77/211 (36.49%), Postives = 110/211 (52.13%), Query Frame = 3
Query:   33 NKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATG--FPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            + ++++F   + L  +  K            +G   +VL+GG    +L + +       IEW+K H+FW DER VP+D D+ N K A    L+ V I +  V+ +  A S      D +     L    +LA SAA G   P FD+ LLGMGP+GHI SLFP  P + E+ + V  + DSPKPPP RIT T P I  S  + ++V G GK+
Sbjct:    2 SSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQ-AQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPM--AASDGDFGGDLDAAA--LAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKA 207          
The following BLAST results are available for this feature:
BLAST of FC875537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL2_ORYSI6.032e-6049.52Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL1_ORYSJ2.292e-5949.31Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSI2.292e-5949.31Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL_MOUSE6.489e-3841.786-phosphogluconolactonase OS=Mus musculus GN=Pgls ... [more]
6PGL_RAT1.888e-3741.316-phosphogluconolactonase OS=Rattus norvegicus GN=... [more]
6PGL_BOVIN7.932e-3640.856-phosphogluconolactonase OS=Bos taurus GN=PGLS PE... [more]
6PGL_HUMAN1.353e-3540.936-phosphogluconolactonase OS=Homo sapiens GN=PGLS ... [more]
6PGL_SCHPO3.119e-3240.28Probable 6-phosphogluconolactonase OS=Schizosaccha... [more]
6PGL_MYCTU7.191e-2936.496-phosphogluconolactonase OS=Mycobacterium tubercu... [more]
6PGL_MYCBO7.191e-2936.496-phosphogluconolactonase OS=Mycobacterium bovis G... [more]

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Properties
Property NameValue
Genbank descriptionC31405A06EF CTVClemen1 Citrus clementina cDNA clone C31405A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875537 ID=FC875537; Name=FC875537; organism=Citrus clementina; type=EST; length=724bp
CATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACGTACAAGTT
TTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATACACCGCCGA
TCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGTCGTCTTAT
CCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAACCCCCGTAT
GTAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTTGATGAAAG
AGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGCTTATGATG
GTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATGCCATCAAT
GATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACTTGTCTCAA
GCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTTTTC
CAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATAGCT
TCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGAAATGGGTTAC
TTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCACCT
TCCCTGTAATCAACTCATCTGCATATATTGCAATGGTGGTGTGTGGTGCT
GGAAAATCAGTGCAGTTCAAACTGCATTGGGTAATATCAAAACTCTGATT
TGCTGCCAGTTCAATGGCATTGGC
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