FC875537

Overview
NameFC875537
Unique NameFC875537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:202..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_DROME (Probable 6-phosphogluconolactonase OS=Drosophila melanogaster GN=CG17333 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.154e-27
Identity = 79/203 (38.92%), Postives = 109/203 (53.69%), Query Frame = 3
Query:   57 SEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSA-EGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPL-LKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            SEE L  +L       S +   +   F+V LSGGSL+  L K ++     +++ AKW  F+ DER V  D  DS Y      +L+Q+P    + +   D     +  A DYE  +K             +   +FDL+LLGMGPDGH  SLFP  P  L+E ++ V  I++SPKPPPERITFT P+IN +  +A VV GA K+
Sbjct:   15 SEEQLVQALGDLLQRCSQEALAKHDKFSVGLSGGSLVQLLTKALKSC---NLKTAKWVFFFCDERYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVK-------------SQVDRFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNVAFVVTGAAKA 201          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: SOL3_YEAST (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae GN=SOL3 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 78/212 (36.79%), Postives = 110/212 (51.89%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            V VF     L   L ++      +  ++K  F V +SGGSLID+L   LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSK 204          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS7 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 78/212 (36.79%), Postives = 110/212 (51.89%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            V VF     L   L ++      +  ++K  F V +SGGSLID+L   LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSK 204          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS6 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 78/212 (36.79%), Postives = 110/212 (51.89%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            V VF     L   L ++      +  ++K  F V +SGGSLID+L   LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSK 204          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS1 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 78/212 (36.79%), Postives = 110/212 (51.89%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            V VF     L   L ++      +  ++K  F V +SGGSLID+L   LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDALYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSK 204          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCLE (6-phosphogluconolactonase OS=Mycobacterium leprae GN=pgl PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 74/210 (35.24%), Postives = 106/210 (50.48%), Query Frame = 3
Query:   39 NVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP--KFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            +V++F   + +  +  K  A         +    +VL+GGS  I  LR L        I+W++ H+FW DER VPKD D+ N K A    L  + I    V+ +       G   D E     L    +LA  AA G+P   FD+ L+GMGP+GHI SLFP    ++E  + V  +++SPKPPPERIT T   I  S  + ++V G  K+
Sbjct:    4 SVEIFSDSKTMVGAAGKRLASTIQSAVAARERALIVLTGGSSGIGLLRDLATRG--QQIDWSRVHLFWGDERYVPKDDDERNEKQARVALLDHIDIPPSQVHPMPAGDGEFG--NDLEAAA--LAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKA 207          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_ANASP (6-phosphogluconolactonase OS=Anabaena sp. (strain PCC 7120) GN=pgl PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24
Identity = 70/184 (38.04%), Postives = 96/184 (52.17%), Query Frame = 3
Query:  120 KEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAI-----NDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            K++G FT+ LSGGS   + + L E      + W K HVFW DER V  DH DSN  +A   +L +V I   N++A+     N A+SA    +  +T             SA   FP  D++LLGMG D H ASLFP    L+  ++ +T       P   RITFT+P IN+++ +  VV GA K
Sbjct:   31 KQQGRFTIALSGGS---TPKPLYEAIAAQKLPWDKIHVFWGDERYVSPDHPDSNELMARTAWLDRVDIPAENIHAVPTLDNNPAVSAAKYEQHLQT----------FFNSAPGEFPALDVVLLGMGDDAHTASLFPHTEALQVRDRLITVGNKDGNP---RITFTYPFINAASSVIFVVAGANK 198          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_SYNY3 (6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23
Identity = 72/182 (39.56%), Postives = 97/182 (53.30%), Query Frame = 3
Query:  123 EKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAI-NDALSAEGAAEDYETCLKHLTKSNILAT---SAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            E+G  T+ LSGG+   + + L E     ++ W K HVFW DER V  DH DSN ++A   +L QV I   N++ +   A   E  A+ YE         N LAT     A  FP FDL+LLG+G DGH ASLFP  P L   ++ +T      +P   R+TFT P+IN +  +  +V GA K
Sbjct:   32 ERGQGTIALSGGN---TPKPLYEALARQALPWEKIHVFWGDERYVSVDHPDSNQRMARLAWLDQVDIPEANIHPMPTAAADPEQDAQTYE---------NELATFFQVEAGHFPAFDLILLGLGDDGHTASLFPHTPALTVGDRLITVGNKDGQP---RLTFTIPLINRARSVVFLVAGASK 198          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: SOL1_YEAST (6-phosphogluconolactonase-like protein 1 OS=Saccharomyces cerevisiae GN=SOL1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.552e-23
Identity = 80/230 (34.78%), Postives = 115/230 (50.00%), Query Frame = 3
Query:    3 SSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGS-FTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPIT---TGNVYAINDAL--SAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSVQFK 671
            +S+      ++K ++  +S    A S        + K  KEK   F + LSGGSLI  L + +     D ++W KW +++ DER+VP    +SNY LA       +      T  +Y I+++L    +  A++YE   K L K    A   +   P FDL LLG  PDGHIASLFP     L+EN  WV  ++++P  P  RI+ T PVI  S  +  VV GA K+   K
Sbjct:   47 TSLNGNGNTESKTMERVNSVRSNASSRGGSEDGATKKLKKEKERRFKIALSGGSLIQVLHEGLLKR--DDVQWGKWDIYFADERLVPFSSSESNYGLAKRKIFDLIDTEKYGTPKIYHIDESLINDPQECADNYE---KILIKG--FAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQENLRENLAWVIPVENAPSGPSNRISLTIPVICHSHRVTFVVEGATKAPVIK 269          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_STRCO (6-phosphogluconolactonase OS=Streptomyces coelicolor GN=pgl PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.027e-23
Identity = 65/184 (35.33%), Postives = 101/184 (54.89%), Query Frame = 3
Query:  126 KGSFTVVLSGGSLIDSL-RKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            +GS +VVL+GG   + L   L   P  D+I+W++  ++W DER +P+   + N   A    L  VP+    V+A+  +        E AA  Y    + L  +++    AA   P FD++LLG+GPD H+ASLFP HP ++E E+ V  +  SPKPPP RI+ T P I ++  + ++  G  K+
Sbjct:   35 RGSASVVLTGGRNGNGLLAALAGSPARDAIDWSRLDLWWGDERFLPEGDPERNVTQAQQALLDSVPLDPKRVHAMAASDGPYGSDVEAAAAAYA---QELATASVPENHAAV--PSFDVLLLGVGPDTHVASLFPEHPGVRETERTVIGVHGSPKPPPIRISLTLPAIRAAREVWLLAAGEDKA 213          
The following BLAST results are available for this feature:
BLAST of FC875537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
6PGL_DROME5.154e-2738.92Probable 6-phosphogluconolactonase OS=Drosophila m... [more]
SOL3_YEAST2.558e-2636.796-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS72.558e-2636.796-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS62.558e-2636.796-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS12.558e-2636.796-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
6PGL_MYCLE3.693e-2535.246-phosphogluconolactonase OS=Mycobacterium leprae ... [more]
6PGL_ANASP6.965e-2438.046-phosphogluconolactonase OS=Anabaena sp. (strain ... [more]
6PGL_SYNY31.188e-2339.566-phosphogluconolactonase OS=Synechocystis sp. (st... [more]
SOL1_YEAST1.552e-2334.786-phosphogluconolactonase-like protein 1 OS=Saccha... [more]
6PGL_STRCO2.027e-2335.336-phosphogluconolactonase OS=Streptomyces coelicol... [more]

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Properties
Property NameValue
Genbank descriptionC31405A06EF CTVClemen1 Citrus clementina cDNA clone C31405A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875537 ID=FC875537; Name=FC875537; organism=Citrus clementina; type=EST; length=724bp
CATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACGTACAAGTT
TTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATACACCGCCGA
TCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGTCGTCTTAT
CCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAACCCCCGTAT
GTAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTTGATGAAAG
AGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGCTTATGATG
GTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATGCCATCAAT
GATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACTTGTCTCAA
GCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTTTTC
CAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATAGCT
TCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGAAATGGGTTAC
TTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCACCT
TCCCTGTAATCAACTCATCTGCATATATTGCAATGGTGGTGTGTGGTGCT
GGAAAATCAGTGCAGTTCAAACTGCATTGGGTAATATCAAAACTCTGATT
TGCTGCCAGTTCAATGGCATTGGC
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