FC875537

Overview
NameFC875537
Unique NameFC875537
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:202..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: SOL2_YEAST (6-phosphogluconolactonase-like protein 2 OS=Saccharomyces cerevisiae GN=SOL2 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21
Identity = 72/191 (37.70%), Postives = 100/191 (52.36%), Query Frame = 3
Query:  105 SAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPIT---TGNVYAINDALSAEGAAEDYETCLKHLTKSNI--LATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            S+K  KEK  F + LSGGSLI+ L + +     D + W  W +++ DER+VP   ++SNY  A    L  +      T  VY I+++L      +D + C  +  K  I   A   +   P FDL LLG  PDGHIASLFP     L+E   WV  ++++P  P  RI+ T PVI  S  +  VV GA K+
Sbjct:   79 SSKPKKEK-RFKIALSGGSLIEVLHEGLLKR--DDVRWGDWDIYFADERLVPFSSNESNYGCAKRKILDLIDTAKYGTPKVYHIDESL-----IDDPQECADNYEKVLIRGFAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQDNLREKLAWVVPVENAPSGPSTRISLTIPVICHSHRVTFVVEGATKA 261          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_CAEEL (Putative 6-phosphogluconolactonase OS=Caenorhabditis elegans GN=Y57G11C.3 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.452e-21
Identity = 65/216 (30.09%), Postives = 105/216 (48.61%), Query Frame = 3
Query:   21 NKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG-AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEK--WVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKS 659
            N N    + V   E++L + L +Y  +       + G+ ++ +SGGS+     K +     + + W +  +F VDER V  D ++SN       +L   P    +V+            A+ YE  L+       L  +A     +FD++ LG+GPDGH AS+FPG   L++  +  WV+ I DSPKPPP RIT T   +  +  +A ++CG  K+
Sbjct:   10 NSNMKPALNVSGDEKELILQLRRYLEEKLTYLLDQNGTVSIGVSGGSMPRVFSKAILSLPQEQLNWKRIRIFMVDERNVDLDSEESNQ----GEYLRLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTA-----RFDILFLGVGPDGHTASIFPGKERLEKITELNWVSVITDSPKPPPSRITLTLQTLQHAKNVAFIICGKQKA 216          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_THEMA (6-phosphogluconolactonase OS=Thermotoga maritima GN=pgl PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 3
Query:  111 KFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            K  +EK    VVL+GG   +    KL E  +     W + H F  DER VP D D SN++   +   S+  I +GNV+ ++ +L  E A E YE  ++  T              +FDL +LGMGPDGH+AS+F      K+N   VTF   S  P   R+T TF  +N+S Y+  ++ G  K
Sbjct:   27 KLLEEKDKIFVVLAGGRTPLPVYEKLAEQKF----PWNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSAT-------------DQFDLAILGMGPDGHVASIFDLETGNKDN--LVTFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEK 190          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: SOL4_YEAST (6-phosphogluconolactonase 4 OS=Saccharomyces cerevisiae GN=SOL4 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19
Identity = 73/219 (33.33%), Postives = 109/219 (49.77%), Query Frame = 3
Query:   42 VQVFDSEEDLAVSLAKYTADL--SAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYV-DSIEWAKWHVFWVDERVVPKDHDDSNY----KLAYDGFLSQV-PITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP-KFDLMLLGMGPDGHIASLFPG---HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            +Q F  ++ L     K+  +   SA  G     F + +SGGS+  +L   LV    +   I+W +W +F+ DER+VP +   SNY    K   D  + Q   +  G  VY IN++L   G            T +  +A   A+  P  FDL+LLG G DGH  SLFPG   + L++E ++ V +  +SPK P +RITFT  V+  +  +  +V GA K
Sbjct:    4 LQRFSEKKSLIHEFGKFILEKQESALTGDADAVFNIAISGGSMNQALYESLVNDKNIFPHIKWPQWRIFFCDERLVPFEDPQSNYGQFKKTVLDPLVHQGNQLNLGPTVYTINESLIGGGE-----------TANRKIAEEYASMLPASFDLILLGCGEDGHTCSLFPGVEFNYLVEEMDRKVLWCNNSPKAPKDRITFTLAVVAEAKSVCFLVRGAAK 211          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.835e-17
Identity = 63/199 (31.66%), Postives = 102/199 (51.26%), Query Frame = 3
Query:   63 EDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSL-IDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            E+L   LA      + +  +  G F + LSGGS  I   ++L    Y  S  WA  H++ VDER VP    DSN++      L  V +   N++ +   L     AE+ +    + ++ + L  +++     FDL+LLGMG DGH ASLFP  P   + ++ V  + +SP  P +R++ + P+IN +  +A++V G  K
Sbjct:  559 EELISKLASDIEAAAVQAVRHFGKFHLALSGGSSPIALFQQLATGHY--SFPWAHTHLWLVDERCVPLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSS-----FDLVLLGMGTDGHTASLFPQSPTGLDGDQLVV-LTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTK 749          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_PSEPU (6-phosphogluconolactonase OS=Pseudomonas putida GN=pgl PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.134e-16
Identity = 69/201 (34.33%), Postives = 94/201 (46.77%), Query Frame = 3
Query:   69 LAVSLAKYTADLSAKFGKEKGSFTVVLSGG-SLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKD----SPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            LA +LA   A+        KG   VVLSGG S +  L KL   P    ++WAK  V   DER VP +H DSN  L     L+        V     A + + AA              + A  A TG P  D+++LGMG DGH ASLFP  P L+      +  +     +P  P +R++ T  ++ S+A+IA+ V G GK
Sbjct:   28 LAATLAHDVAERLRAAIAAKGQACVVLSGGRSPVPFLEKLASEP----LDWAKVTVSLADERWVPVEHADSNAGLLARHLLTGAAAKARFVGLYQQAENLDAAA--------------LKADQALTGLPPIDVLVLGMGDDGHTASLFPASPNLEAGLDLASTRRCLPLLAPSVPHQRLSMTRSLLASAAFIALSVQGPGK 210          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.093e-16
Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 3
Query:   63 EDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL-RKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            E+L   LA      + +  +  G F + LSGGS   +L ++L    Y     WA  H++ VDER VP    +SN++      L  V I   N++ +   L     AE+ +    +  + + L  +++     FDL+LLGMG DGH ASLFP  P   + E+ V  +  SP  P  R++ + P+IN +  +A++V G  K
Sbjct:  561 EELISKLANDIEATAVRAVRRFGQFHLALSGGSSPVALFQQLATAHY--GFPWAHTHLWLVDERCVPLSDPESNFQGLQAHLLQHVRIPYYNIHPMPVHLQQRLCAEEDQGAQIYAREISALVANSS-----FDLVLLGMGADGHTASLFPQSPTGLDGEQLVV-LTTSPSQPHRRMSLSLPLINRAKKVAVLVMGRMK 751          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_TREPA (6-phosphogluconolactonase OS=Treponema pallidum GN=pgl PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 49/172 (28.49%), Postives = 78/172 (45.35%), Query Frame = 3
Query:  141 VVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            + LSGGS    + +     +   ++W +   FW DER VP     SN+ + +   L  + I    V+ +    + E A   Y   ++              G P FD++LLGMG DGH AS+FP H +   +      +   P    +R++FT  +IN++  I +VV G  K
Sbjct:   32 LALSGGSTPREIFRTWAHEFRHHLDWKRLRFFWSDERCVPPTDAQSNFNMTHSALLEPLEINPDAVFRVRGEDAPESACAAYSQEIE-------ARLPRQRGVPCFDIILLGMGADGHTASIFP-HEIELWDHSGCCVVATHPDTGQKRVSFTGHLINNAHEIYVVVTGREK 195          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_RHIME (6-phosphogluconolactonase OS=Rhizobium meliloti GN=pgl PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 62/210 (29.52%), Postives = 98/210 (46.67%), Query Frame = 3
Query:   39 NVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVT----FIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            N+ +F++   LA +LA       A     +G+ ++ +SGGS   +  + +    +D   W+K  V  VDER VP ++D SN++L  D  L         V     A +AE AA            +     +A+ G P  D+++LGMG DGH AS FPG   L+E     T       ++      R+TFTF  +  + Y+ + + G+GK
Sbjct:    4 NMHIFENPSALAEALADDVGARLAAAIAARGTASLAVSGGSTPKAFFRSLSRRELD---WSKVTVTLVDERFVPPENDRSNHRLVADNLLKDGAAEARFVPLYQAAETAEAAA------------AIASGRTASLGAP-LDVVVLGMGTDGHTASFFPGGTRLEEALDPTTPRGVITMEAEGAGEPRLTFTFSSLQDAGYLVLHIEGSGK 197          
BLAST of FC875537 vs. ExPASy Swiss-Prot
Match: 6PGL_CHLMU (6-phosphogluconolactonase OS=Chlamydia muridarum GN=pgl PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13
Identity = 57/210 (27.14%), Postives = 95/210 (45.24%), Query Frame = 3
Query:   27 NKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGK 656
            N    + + +S+ED            + K  +++G+F V LSGG     + + +        + +K  VFW DER        SNY  A D  L  + I    ++ + D  + +G  E YE  ++      I           FD+++LG+G DGH  SLFPG   L+E ++ V F  + P+    R+T TFP++  + ++   + G  K
Sbjct:    8 NDANRMLIAESQEDFLQIACYDWISTANKAIQKRGAFYVALSGGKTPLQIFQEIVKKRAAISDCSKIFVFWGDERASEDTEAGSNYLKAMD-ILKWLRIPDTQIFRM-DTANPKGD-EIYENLIREHVPDTI-----------FDMVMLGVGEDGHTLSLFPGTAALEEKDRLVVF-NEVPQLQTRRMTLTFPIVRQARHLVAYIQGTAK 202          
The following BLAST results are available for this feature:
BLAST of FC875537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
SOL2_YEAST1.112e-2137.706-phosphogluconolactonase-like protein 2 OS=Saccha... [more]
6PGL_CAEEL1.452e-2130.09Putative 6-phosphogluconolactonase OS=Caenorhabdit... [more]
6PGL_THEMA2.739e-2035.526-phosphogluconolactonase OS=Thermotoga maritima G... [more]
SOL4_YEAST2.319e-1933.336-phosphogluconolactonase 4 OS=Saccharomyces cerev... [more]
G6PE_MOUSE4.835e-1731.66GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
6PGL_PSEPU3.134e-1634.336-phosphogluconolactonase OS=Pseudomonas putida GN... [more]
G6PE_HUMAN4.093e-1631.66GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
6PGL_TREPA1.115e-1328.496-phosphogluconolactonase OS=Treponema pallidum GN... [more]
6PGL_RHIME1.115e-1329.526-phosphogluconolactonase OS=Rhizobium meliloti GN... [more]
6PGL_CHLMU2.483e-1327.146-phosphogluconolactonase OS=Chlamydia muridarum G... [more]

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Properties
Property NameValue
Genbank descriptionC31405A06EF CTVClemen1 Citrus clementina cDNA clone C31405A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875537 ID=FC875537; Name=FC875537; organism=Citrus clementina; type=EST; length=724bp
CATCATCAATGGCTGCCGAGAATAAGAACAAGAACAAGAACGTACAAGTT
TTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGCCAAATACACCGCCGA
TCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCTTCACTGTCGTCTTAT
CCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTAGTGGAACCCCCGTAT
GTAGATTCAATTGAATGGGCGAAATGGCATGTGTTTTGGGTTGATGAAAG
AGTTGTTCCCAAGGATCATGATGATAGCAATTATAAGCTTGCTTATGATG
GTTTCCTTTCTCAGGTACCAATTACCACTGGCAATGTCTATGCCATCAAT
GATGCATTATCTGCTGAAGGTGCAGCTGAAGATTACGAGACTTGTCTCAA
GCATTTGACAAAGAGCAATATATTAGCTACATCTGCTGCTACTGGTTTTC
CAAAGTTTGATCTCATGCTTCTGGGTATGGGTCCAGATGGACATATAGCT
TCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAGAATGAGAAATGGGTTAC
TTTCATTAAAGACTCGCCAAAGCCACCTCCAGAGAGAATCACTTTCACCT
TCCCTGTAATCAACTCATCTGCATATATTGCAATGGTGGTGTGTGGTGCT
GGAAAATCAGTGCAGTTCAAACTGCATTGGGTAATATCAAAACTCTGATT
TGCTGCCAGTTCAATGGCATTGGC
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