FC875547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_CYAP8 (ATP synthase subunit delta OS=Cyanothece sp. (strain PCC 8801) GN=atpH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 40/146 (27.40%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 249 GIRMSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 G +S+ +A YA AL+ +A+A+N E D + I E + + ++P I K+ ++ + P NF+ +L+D +R+ +++I +++ + K+TNT +A V+S +L + +++ LTGA+ V IKT Sbjct: 3 GSLISSAIAEPYAQALMSVAQAHNLTEQFGDDCRSLIAILEESRDLQGLILSPVIKETDKKAVLRRMM-GDRTSPYLLNFIMLLVDKRRIIFLEEICQQYLTLLRKLTNTVLAEVTSAKELSDRQCRAVTDKIKDLTGAQGVEIKT 147
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_CYAP4 (ATP synthase subunit delta OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=atpH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 39/143 (27.27%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 258 MSATVATSYAIALVDLAKANNTLESTSADVEKI-EKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 + A + YA AL+ LA++NN DV I + + + ++ + NP + E K+ ++ ++ + + FL +L+D +R+ +++ I K+F+ + K+TNT +A V+SVV+L + ++V+ +TG++ V ++T Sbjct: 6 VGAEILEPYAEALMSLAQSNNLTGRFGEDVAFILDLLKTSPELQQVLANPFVKPESKKAILRQLV-APQVHDFVLKFLLLLVDRRRIFLLEPICKQFQALLRKLTNTVLAEVTSVVELTEPQRQAVIEKVKTMTGSQQVELET 147
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_ANAVT (ATP synthase subunit delta OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 39/139 (28.06%), Postives = 76/139 (54.68%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 VA YA AL+ +AK+ + E D + + +E +Q+ F NP I E K+ ++ +I ++ P NFL +L+D +R+ +++I++++ + ++ T +A V+S V L + + ++V LT A+ V + T Sbjct: 10 VAQPYAQALLSIAKSKSLTEEFGTDARTLLNLLAENQQLRNFIDNPFIAAENKKALIKQILSEAS--PYLRNFLLLLVDKRRIFFLEEILQQYLALLRQLNQTVLAEVTSAVALTEDQQQAVKEKVLALTKARQVELAT 146
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_TRIEI (ATP synthase subunit delta OS=Trichodesmium erythraeum (strain IMS101) GN=atpH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 41/143 (28.67%), Postives = 75/143 (52.45%), Query Frame = 3 Query: 258 MSATVATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 ++ + YA AL+ LA++ + + + DV + I E + +F NP I E K+ +V + + PL NFL +LID R+ ++ I K++ + ++ T +A V+S V+L I ++V+ +T A+ V I+T Sbjct: 4 IAGEIVEPYAAALMSLAQSKDLTDKFAEDVRSLINILDESPEFKQFVGNPVIKQEDKKAVVKRML-GEQVDPLMRNFLMLLIDKGRITFLEQIGKQYLALLRELNQTVLAEVTSTVELNENQKNTIRERVKSMTSAREVEIET 145
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_THEEB (ATP synthase subunit delta OS=Thermosynechococcus elongatus (strain BP-1) GN=atpH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 37/139 (26.62%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVE-KIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 V YA AL+ LA+ +N ++ D + +E + S ++ +F NP I E K+ ++ ++ + NFL +L+D +R++ + I + + + K+ N +A V+S V+L + + ++V+ +TGA +V + T Sbjct: 10 VVEPYAEALLSLAQTHNLIDQFQQDTQLMVELVASSGELQQFLANPLIKPEAKKNVLRQLTVDK-VHGYFLNFLMLLVDRRRINFLSSICEHYRALVRKLRNVALAEVTSAVELNDDQRRAVVEKVKTMTGAADVELVT 147
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_BACP2 (ATP synthase subunit delta OS=Bacillus pumilus (strain SAFR-032) GN=atpH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 37/148 (25.00%), Postives = 84/148 (56.76%), Query Frame = 3 Query: 258 MSATVATS-YAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVMTR 695 MS T+ + YA AL D+ A++ ++ T ++ +I+K+ +++++++F V+P I +KK+ ++ E K + L + + +LID R ++ ++ EF ++ N+ + A+V SV L + +++ K G ++R++ V+ + Sbjct: 1 MSVTIVSKRYASALFDIVLASSAVDETEKELNEIKKVLKADQELNDFLVHPKITADKKKHLIAEAFKGVSTHVL--HTMYLLIDRGRTNIFSEMTSEFVKLANRTKQIDDAIVYSVKPLSGAEIQSLSEVFAKKAGVTSLRVENVIDK 146
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_ANASP (ATP synthase subunit delta OS=Anabaena sp. (strain PCC 7120) GN=atpH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 39/139 (28.06%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 VA YA AL+ +AK+ + E D + + +E +Q+ F NP I E K+ ++ +I ++ P NFL +L+D +R+ + +I++++ + ++ T +A V+S V L + + ++V LT A+ V + T Sbjct: 10 VAQPYAQALLSIAKSKSLTEEFGTDARTLLNLLTENQQLRNFIDNPFIAAENKKALIKQILSEAS--PYLRNFLLLLVDKRRIFFLPEILQQYLALLRQLNQTVLAEVTSAVALTEDQQQAVTEKVLALTKARQVELAT 146
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_PORYE (ATP synthase subunit delta, chloroplastic OS=Porphyra yezoensis GN=atpD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 37/137 (27.01%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 270 VATSYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRI 677 +A YA+AL+DLAK E S D++ I+ I ++ ++ F NP +E K+E++ + T +FL IL+D KR+ ++ I ++ E+ +M + +A +++ + L + + ++++ +T AK V++ Sbjct: 10 IAQPYAVALLDLAKTKKVTEKVSQDIQSIQNILAQSDKLKIFLANPLKTVEAKKEVIIATV-GDQINENTLSFLMILVDRKRIGMLDAIASKYLELAYQMESLTIANINTSIALSPDQETLLTEKIKVMTKAKEVKL 145
BLAST of FC875547 vs. ExPASy Swiss-Prot
Match: ATPD_ACAM1 (ATP synthase subunit delta OS=Acaryochloris marina (strain MBIC 11017) GN=atpH PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 40/143 (27.97%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 258 MSATVATSYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKT 683 +S+T+ YA AL+ +A++NN DV + + + + +F VNP + ++ ++ ++ +S +Q NFL +LID +R+ ++ I K ++ + K+ NT +A V+S V+L E I +V+ ++ A V ++T Sbjct: 6 VSSTIVEPYAEALMSVAQSNNLTNQIGEDVSFVLSLLQTSDDLKDFLVNPLTPADAQKAVLRQLAESR-VQKQFFNFLLLLIDRRRIIFLEGICKYYQALLRKLNNTVLAEVTSTVELTDEQRHAITDKVKHMSQAAQVDLET 147 The following BLAST results are available for this feature:
BLAST of FC875547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875547 ID=FC875547; Name=FC875547; organism=Citrus clementina; type=EST; length=699bpback to top |