FC875555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.711e-59 Identity = 85/104 (81.73%), Postives = 95/104 (91.35%), Query Frame = 1 Query: 286 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597 LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAEN Sbjct: 1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAEN 104 HSP 2 Score: 68.1662 bits (165), Expect = 4.711e-59 Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = 3 Query: 597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722 +K ARVL+VCSE TAVTFRGP++T +DSLVGQALF DGAAA+ Sbjct: 105 NKDARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAI 146
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 7.189e-54 Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1 Query: 370 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597 LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN Sbjct: 1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 76 HSP 2 Score: 80.8777 bits (198), Expect = 7.189e-54 Identity = 38/42 (90.48%), Postives = 42/42 (100.00%), Query Frame = 3 Query: 597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722 +KGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+ Sbjct: 77 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 118
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.527e-40 Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 1 Query: 427 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 597 ITHLI CTTS VDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN Sbjct: 1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 56 HSP 2 Score: 80.8777 bits (198), Expect = 3.527e-40 Identity = 38/42 (90.48%), Postives = 42/42 (100.00%), Query Frame = 3 Query: 597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722 +KGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALFGDGAAA+ Sbjct: 57 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 98
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.386e-24 Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 3 Query: 597 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAV 722 +KGARVLVVCSEITAVTFRGP+DTHLDSLVGQALFGDGAAAV Sbjct: 24 NKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 65 HSP 2 Score: 50.8322 bits (120), Expect = 2.386e-24 Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1 Query: 529 MMYQQGCFAGGTVLRLAKDLAEN 597 MMYQQGCFAGGTVLRLAKDLAEN Sbjct: 1 MMYQQGCFAGGTVLRLAKDLAEN 23
BLAST of FC875555 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.974e-18 Identity = 54/196 (27.55%), Postives = 99/196 (50.51%), Query Frame = 1 Query: 7 TLTKHEPQTYSLRVQLEMATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 594 ++ +H+ Q ++V ++ R + +++ + VL IG + P ++Q D + E EK KR+ ++S IK R++ + + EN ++ D V VP L ++A +A+K+WG K ITH++ T++G+ +P +++L L+GL V+R + GC AG + LR A LA+ Sbjct: 2755 SVQQHQKQQQKVQV-IQQQQQPLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAK 2945 HSP 2 Score: 29.6462 bits (65), Expect = 1.974e-18 Identity = 14/37 (37.84%), Postives = 23/37 (62.16%), Query Frame = 3 Query: 609 RVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 719 R+LVVC+E+ ++ F D +V ++F DG+AA Sbjct: 2951 RILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAA 2985 The following BLAST results are available for this feature:
BLAST of FC875555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875555 ID=FC875555; Name=FC875555; organism=Citrus clementina; type=EST; length=723bpback to top |