FC875558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.051e-37 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 3 Query: 213 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 AT G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP T+FD KRLIGRKF D VQ DMKL P++++N GKP + V + Sbjct: 2 ATAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYK 110
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.051e-37 Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 3 Query: 201 AKEEATK--LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 A+EE K +GTV+GIDLGTTYSCVGV+KNG VEIIANDQGNRITPS+VAFT + ERLIG+AAKNQ NP+ T+FD KRLIGR + D VQ+D+K P+K+V + KPYIQV I Sbjct: 18 AEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDI 132
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.051e-37 Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 3 Query: 201 AKEEATK--LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 A+EE K +GTV+GIDLGTTYSCVGV+KNG VEIIANDQGNRITPS+VAFT + ERLIG+AAKNQ NP+ T+FD KRLIGR + D VQ+D+K P+K+V + KPYIQV I Sbjct: 18 AEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDI 132
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.051e-37 Identity = 78/121 (64.46%), Postives = 95/121 (78.51%), Query Frame = 3 Query: 183 LFAISIAKEEATK--LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 L + A+EE K +GTV+GIDLGTTYSCVGV+KNG VEIIANDQGNRITPS+VAFT + ERLIG+AAKNQ NP+ T+FD KRLIGR + D VQ+D+K P+K+V + KPYIQV + Sbjct: 13 LLGTARAEEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDV 133
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 1.373e-37 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 225 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP TIFD KRLIGRKFED VQ DMK P+++V+ GKP +QV+ + Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK 109
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.373e-37 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 225 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP TIFD KRLIGRKFED VQ DMK P+++V+ GKP +QV+ + Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK 109
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.373e-37 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 225 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP TIFD KRLIGRKFED VQ DMK P+++V+ GKP +QV+ + Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK 109
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 1.373e-37 Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 225 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP TIFD KRLIGRKFED VQ DMK P+++V+ GKP +QV+ + Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK 109
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.793e-37 Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = 3 Query: 225 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIR 539 G IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP TIFD KRLIGRK++D VQ DMK P+++VN GKP +QV+ + Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDPTVQSDMKHWPFRVVNEGGKPKVQVEYK 109
BLAST of FC875558 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.342e-37 Identity = 77/135 (57.04%), Postives = 100/135 (74.07%), Query Frame = 3 Query: 168 VFFGGLFAISIA----------KEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT--DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQI 536 +F GL A+S +++ TK GT+IGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+VAF+ +RLIG+AAKNQ +NP+ TIFD KRLIGR + DK VQ D+K P+K++++ KP ++V++ Sbjct: 4 LFLLGLIALSAVSVYCEEEEKTEKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV 138 The following BLAST results are available for this feature:
BLAST of FC875558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875558 ID=FC875558; Name=FC875558; organism=Citrus clementina; type=EST; length=541bpback to top |