FC875560

Overview
NameFC875560
Unique NameFC875560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:43..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.097e-46
Identity = 106/187 (56.68%), Postives = 127/187 (67.91%), Query Frame = 2
Query:  197 VEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            VEE LG    G  TD +V +RE E+I          + +R  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D GIGMTKE+LIKNLGTIAKSGTS F+ KM    D       LIGQFGVGFYS +L AD   V  +H
Sbjct:   30 VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIKEIREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--AGNEELTVKIKCDKEKNMLHVTDTGIGMTKEELIKNLGTIAKSGTSEFLNKMTEMQDDSQSTSELIGQFGVGFYSAFLVADRVIVTSKH 214          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 109/201 (54.23%), Postives = 135/201 (67.16%), Query Frame = 2
Query:  155 KAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISK--------RSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +A+DE D  VD   VEE LG    G  TD +V +RE E+I          R LR  +EKF FQAEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD+  L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGF S +L AD   V  +H
Sbjct:   20 RADDEVD--VDGT-VEEDLGKSREGSRTDDEVVQREEEAIQLDGLNASQIRELREKSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL--SGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFCSAFLVADKVIVTSKH 215          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 5.008e-44
Identity = 90/146 (61.64%), Postives = 118/146 (80.82%), Query Frame = 2
Query:  260 EAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-LNLIGQFGVGFYSVYLGAD 694
            EAE+   + +    EKF FQ EV++LM+IIINSLYS K+IFLRELISNASDALDKIRFL+LT+ ++LGEG+ + L+I IK+DK   +L I DRG+GMTK++L++NLGTIA+SGT  F++K+  S +  NLIGQFGVGFYS++L AD
Sbjct:   39 EAEA---KLIEEKGEKFTFQTEVNKLMNIIINSLYSKKEIFLRELISNASDALDKIRFLALTNADLLGEGEQSNLDIHIKIDKANNVLHITDRGVGMTKDELVRNLGTIAQSGTKEFIKKVSDSAESSNLIGQFGVGFYSLFLVAD 181          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.968e-41
Identity = 88/142 (61.97%), Postives = 109/142 (76.76%), Query Frame = 2
Query:  293 NNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +N E F+F+AE+S+LM +IIN++YSNK+IFLRELISNASDALDKIR+ SL+D   L    +  L I+I  DKE KILSIRD GIGMTK DLI NLG IAKSGT  F+E   +  D+++IGQFGVGFYS YL AD  +V+ +H
Sbjct:    2 SNTETFKFEAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPHALDAEKD--LFIRITPDKENKILSIRDTGIGMTKNDLINNLGVIAKSGTKQFMEAAASGADISMIGQFGVGFYSAYLVADKVQVVSKH 141          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_LEIIN (Heat shock protein 83-1 OS=Leishmania infantum GN=HSP83-1 PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 5.182e-41
Identity = 84/131 (64.12%), Postives = 105/131 (80.15%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            E F FQAE+++LM +IIN+ YSNK+IFLRELISNASDA DKIR+ SLTD  VLGE  + +L I++  DKE K L++ D GIGMTK DL+ NLGTIA+SGT AF+E ++  GD+++IGQFGVGFYS YL AD
Sbjct:    3 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGE--SPRLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVAD 131          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.359e-40
Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI 709
            ++E FEFQAE+S+L+ +IIN++YSNK+IFLRELISNASDALDKIR+ SL+D   L  G +  L I I  DKE K L+IRD GIGMTK DLI NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL AD   V+
Sbjct:    2 SSETFEFQAEISQLLSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPTKLDTGKD--LRIDIIPDKENKTLTIRDTGIGMTKADLINNLGTIARSGTKQFMEALSAGADISMIGQFGVGFYSAYLVADRVTVV 137          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_LEIAM (Heat shock protein 83 OS=Leishmania amazonensis GN=HSP83 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.730e-40
Identity = 81/131 (61.83%), Postives = 104/131 (79.39%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            E F FQAE+++LM +IIN+ YSNK+IFLR++ISNASDA DKIR+ SLTD  VLG  D T+L +++  DKE K L++ D GIGMTK DL+ NLGTIA+SGT AF+E ++   D+++IGQFGVGFYS YL AD
Sbjct:    3 ETFAFQAEINQLMSLIINTFYSNKEIFLRDVISNASDACDKIRYQSLTDPSVLG--DATRLCVRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGADMSMIGQFGVGFYSAYLVAD 131          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.730e-40
Identity = 86/142 (60.56%), Postives = 114/142 (80.28%), Query Frame = 2
Query:  293 NNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI*QH 718
            ++ E +EFQAE+++LM +IIN++YSNK+IFLRELISNASDALDKIR+ SL+D +VL E D  +L I++    E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D+++IGQFGVGFYS++L AD  +VI +H
Sbjct:    2 SSQETYEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQSLSDPKVL-ESD-PELFIRLTPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKH 141          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.276e-39
Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 2
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI 709
            AE FEFQAE+S+L+ +IIN++YSNK+IFLREL+SNASDALDKIR+ SL+D   L  G +  L I I  DKE K L+I+D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL AD   V+
Sbjct:    2 AETFEFQAEISQLLSLIINTVYSNKEIFLRELVSNASDALDKIRYESLSDPSKLDTGKD--LRIDIIPDKENKTLTIQDTGIGMTKADLVNNLGTIARSGTKQFMEALTAGADISMIGQFGVGFYSAYLVADRVTVV 136          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP85_TRYCR (Heat shock-like 85 kDa protein OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.276e-39
Identity = 81/136 (59.56%), Postives = 106/136 (77.94%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI 709
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDA DKIR+ SLT++ VLG  D + L I++  DK  K L++ D GIGMTK +L+ NLGTIA+SGT AF+E ++  GD+++IGQFGVGFYS YL AD   V+
Sbjct:    3 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQAVLG--DESHLRIRVVPDKANKTLTVEDTGIGMTKAELVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVV 136          
The following BLAST results are available for this feature:
BLAST of FC875560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
ENPL_CHICK4.097e-4656.68Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
ENPL_PONAB1.557e-4554.23Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_DICDI5.008e-4461.64Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HSP90_SCHPO3.968e-4161.97Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HSP83_LEIIN5.182e-4164.12Heat shock protein 83-1 OS=Leishmania infantum GN=... [more]
HSP90_ASPFU3.359e-4062.32Heat shock protein 90 OS=Aspergillus fumigatus GN=... [more]
HSP83_LEIAM5.730e-4061.83Heat shock protein 83 OS=Leishmania amazonensis GN... [more]
HSP82_ASHGO5.730e-4060.56Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HSP90_PODAN1.276e-3961.31Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP85_TRYCR1.276e-3959.56Heat shock-like 85 kDa protein OS=Trypanosoma cruz... [more]

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Properties
Property NameValue
Genbank descriptionC31405C07EF CTVClemen1 Citrus clementina cDNA clone C31405C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875560 ID=FC875560; Name=FC875560; organism=Citrus clementina; type=EST; length=751bp
GAATAGGCAATAATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTA
TACTAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAGTCATTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGGC
T
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