FC875560

Overview
NameFC875560
Unique NameFC875560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_COXBU (Chaperone protein htpG OS=Coxiella burnetii GN=htpG PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.511e-32
Identity = 76/139 (54.68%), Postives = 104/139 (74.82%), Query Frame = 2
Query:  284 SLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            SL+  AE   F+AEV +L+ ++ +SLYSNK+IFLRELISN+SDA DK+R+ +L+D   L E D   L+I I  DK+ + ++IRD GIGM++E++I+NLGTIAKSGT AF E +  + + D  LIGQFGVGFYS ++ AD
Sbjct:    2 SLQPQAETLSFEAEVKQLLHLVAHSLYSNKEIFLRELISNSSDAADKLRYQALSD-AALYEND-ADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLAEKKAEDSQLIGQFGVGFYSAFIVAD 138          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_COXBR (Chaperone protein htpG OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.511e-32
Identity = 76/139 (54.68%), Postives = 104/139 (74.82%), Query Frame = 2
Query:  284 SLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            SL+  AE   F+AEV +L+ ++ +SLYSNK+IFLRELISN+SDA DK+R+ +L+D   L E D   L+I I  DK+ + ++IRD GIGM++E++I+NLGTIAKSGT AF E +  + + D  LIGQFGVGFYS ++ AD
Sbjct:    2 SLQPQAETLSFEAEVKQLLHLVAHSLYSNKEIFLRELISNSSDAADKLRYQALSD-AALYEND-ADLKIWIDFDKDNRTITIRDNGIGMSREEVIENLGTIAKSGTRAFRELLAEKKAEDSQLIGQFGVGFYSAFIVAD 138          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_RICPR (Chaperone protein htpG OS=Rickettsia prowazekii GN=htpG PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.974e-32
Identity = 73/133 (54.89%), Postives = 102/133 (76.69%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            EK +F AEV ++++++I+SLYSNK+IF+RELISNASDA DK+R+LS ++ E++    N K  I +K+DK+   + IRD GIGM KEDLI+NLGTIA+SGT+ F++ +   +  D  LIGQFGVGFYS ++ AD
Sbjct:    4 EKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELIAGDSNFK--IIVKVDKDNGQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLSGDSKKDNMLIGQFGVGFYSSFMVAD 134          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_CITK8 (Chaperone protein htpG OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.974e-32
Identity = 72/129 (55.81%), Postives = 101/129 (78.29%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ + L EGD  +L +++  DK+K+ L+I D G+GM ++D+I +LGTIAKSGT +F+E M    + D  LIGQFGVGFYS ++ AD
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD-LYEGDG-ELRVRVSFDKDKRTLTIADNGVGMNRDDVIDHLGTIAKSGTKSFLESMGSDQAKDSQLIGQFGVGFYSAFIVAD 135          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCM (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain M66-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 74/135 (54.81%), Postives = 104/135 (77.04%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            N E   FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA+DK+RF +L+  + L +GD  +L +++  DK+K  L+I D GIGMT++++I+NLGTIAKSGT+ F  K+  + S +  LIGQFGVGFYS ++ AD
Sbjct:    8 NKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPD-LYQGD-AELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSKNSQLIGQFGVGFYSAFIVAD 140          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCH (Chaperone protein htpG OS=Vibrio cholerae GN=htpG PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 74/135 (54.81%), Postives = 104/135 (77.04%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            N E   FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA+DK+RF +L+  + L +GD  +L +++  DK+K  L+I D GIGMT++++I+NLGTIAKSGT+ F  K+  + S +  LIGQFGVGFYS ++ AD
Sbjct:    8 NKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPD-LYQGD-AELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSKNSQLIGQFGVGFYSAFIVAD 140          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_VIBC3 (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 74/135 (54.81%), Postives = 104/135 (77.04%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            N E   FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA+DK+RF +L+  + L +GD  +L +++  DK+K  L+I D GIGMT++++I+NLGTIAKSGT+ F  K+  + S +  LIGQFGVGFYS ++ AD
Sbjct:    8 NKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPD-LYQGD-AELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSKNSQLIGQFGVGFYSAFIVAD 140          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_METPP (Chaperone protein htpG OS=Methylibium petroleiphilum (strain PM1) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 73/135 (54.07%), Postives = 98/135 (72.59%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            N +   FQAEV +L+ ++ +SLYSNK+IFLRELISNASDA DK+RF +L D  +    D + LE+++  DKE + ++I D GIGM+ +++I NLGTIAKSGT  FV K+  + + D  LIGQFGVGFYS Y+ AD
Sbjct:    2 NKQTLSFQAEVQQLLHLVTHSLYSNKEIFLRELISNASDACDKLRFEALNDAALY--EDASTLEVRVSFDKEARTITIADNGIGMSADEVIANLGTIAKSGTREFVGKLSGEQAKDAQLIGQFGVGFYSGYIVAD 134          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSM (Chaperone protein htpG OS=Magnetococcus sp. (strain MC-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 76/139 (54.68%), Postives = 102/139 (73.38%), Query Frame = 2
Query:  284 SLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            S     E  EFQ EVS+L+D++I++LYSNK+IFLRELISNASDA DK+RF  L+D + L EGD ++L I+++ DKE    SI D GIGM+++++I N+GTIAKSGT  F + +      D +LIGQFGVGFYS ++ AD
Sbjct:    2 SAATETEVREFQTEVSQLLDLMIHALYSNKEIFLRELISNASDANDKLRFAGLSD-DSLFEGD-SELTIKLEFDKEAGTFSIMDNGIGMSRDEVISNIGTIAKSGTKEFFKSLTGDQQRDAHLIGQFGVGFYSSFIVAD 138          
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_CLOAB (Chaperone protein htpG OS=Clostridium acetobutylicum GN=htpG PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.578e-32
Identity = 73/133 (54.89%), Postives = 96/133 (72.18%), Query Frame = 2
Query:  311 EFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI 709
            +F+AE  RL+D++INS+Y+NK+IFLRELISNASDA+DK  + SL D  +    D+    I+I  DKE K L+I D GIGMTK+DL  NLGTIAKSG+ AF  + +    +++IGQFGVGFYS ++ AD   VI
Sbjct:    5 QFKAESKRLLDLMINSIYTNKEIFLRELISNASDAIDKCYYRSLVDTNITFNKDD--FYIRISADKENKTLTITDTGIGMTKDDLENNLGTIAKSGSFAFKSENEAKEGVDIIGQFGVGFYSAFMVADDVTVI 135          
The following BLAST results are available for this feature:
BLAST of FC875560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_COXBU1.511e-3254.68Chaperone protein htpG OS=Coxiella burnetii GN=htp... [more]
HTPG_COXBR1.511e-3254.68Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_RICPR1.974e-3254.89Chaperone protein htpG OS=Rickettsia prowazekii GN... [more]
HTPG_CITK81.974e-3255.81Chaperone protein htpG OS=Citrobacter koseri (stra... [more]
HTPG_VIBCM2.578e-3254.81Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_VIBCH2.578e-3254.81Chaperone protein htpG OS=Vibrio cholerae GN=htpG ... [more]
HTPG_VIBC32.578e-3254.81Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_METPP2.578e-3254.07Chaperone protein htpG OS=Methylibium petroleiphil... [more]
HTPG_MAGSM2.578e-3254.68Chaperone protein htpG OS=Magnetococcus sp. (strai... [more]
HTPG_CLOAB2.578e-3254.89Chaperone protein htpG OS=Clostridium acetobutylic... [more]

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Properties
Property NameValue
Genbank descriptionC31405C07EF CTVClemen1 Citrus clementina cDNA clone C31405C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875560 ID=FC875560; Name=FC875560; organism=Citrus clementina; type=EST; length=751bp
GAATAGGCAATAATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTA
TACTAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAGTCATTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGGC
T
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