FC875560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.031e-28 Identity = 68/133 (51.13%), Postives = 94/133 (70.68%), Query Frame = 2 Query: 299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-LNLIGQFGVGFYSVYLGAD 694 +E FQAEV+ L++++++S+YS DIFLRELISNASDALDK+R+ S+ ++ G K IQI K L++ D GIGM +++LI NLGTIAKSGT +F+ K+ + D LIGQFGVGFY+ ++ AD Sbjct: 8 SETKPFQAEVAELLNLMVHSVYSETDIFLRELISNASDALDKLRYESIATPALMEAGGAPK--IQIVPRKAPDTLTVIDNGIGMNRQELIDNLGTIAKSGTKSFLTKLTEAKDGAGLIGQFGVGFYAAFMVAD 138
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_METNO (Chaperone protein htpG OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=htpG PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.031e-28 Identity = 67/138 (48.55%), Postives = 98/138 (71.01%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM---QTSGDLNLIGQFGVGFYSVYLGADYXEV 706 E+ F AEV RL+D+++++LYS ++IFLREL++NA+DA+D+ RF +LTD + + +++I+ DK + L+I D GIGM KEDL +NLGTIA+SGT AF + + + +LIGQFGVGFYS ++ AD EV Sbjct: 6 ERHAFGAEVGRLLDLVVHALYSEREIFLRELVANAADAVDRRRFGALTDPALALPAE---AKVRIRPDKAARTLTISDPGIGMGKEDLAQNLGTIARSGTRAFSQSLAEAKPDERPSLIGQFGVGFYSAFMVADRVEV 140
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_METPB (Chaperone protein htpG OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=htpG PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.582e-28 Identity = 69/143 (48.25%), Postives = 98/143 (68.53%), Query Frame = 2 Query: 287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVE-----KMQTSGDL--NLIGQFGVGFYSVYLGAD 694 + E+ EF AEV RL+D+++++LYS+++IFLREL++NA+DA D+ RF +LT++ + D + I DK + L+I D GIGM+KEDL +NLGTIA+SGT AF + K DL +LIGQFGVGFYS ++ AD Sbjct: 1 MSETVERHEFGAEVGRLLDLVVHALYSDREIFLRELVANAADATDRRRFEALTNEALALPSD---ARVLIAPDKAARTLTISDSGIGMSKEDLAQNLGTIARSGTRAFSQALGEAKGSEGEDLRPSLIGQFGVGFYSAFMVAD 140
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA6 (Chaperone protein htpG OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=htpG PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.121e-27 Identity = 67/133 (50.38%), Postives = 96/133 (72.18%), Query Frame = 2 Query: 302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694 E FQ EV +L+ ++I+SLYSNK+IFLREL+SNA+DA DK+RF +L++ + L EGD L +++ +DK+ ++I D GIGM + +I++LGTIAKSGTS F + + D LIGQFGVGFYS ++ A+ Sbjct: 8 ETHGFQTEVKQLLQLMIHSLYSNKEIFLRELVSNAADAADKLRFKALSN-DSLYEGDG-DLCVKLSIDKDAGSITISDNGIGMDRASVIEHLGTIAKSGTSEFFSNLSGDQAKDSQLIGQFGVGFYSAFIVAE 138
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.121e-27 Identity = 68/131 (51.91%), Postives = 97/131 (74.05%), Query Frame = 2 Query: 311 EFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF---VEKMQTSGDLNLIGQFGVGFYSVYLGAD 694 +F+ EV +L+D++I+SLYSNKDIFLRELISNASDA+DK+ F S + V+ EG+ + +I++ DK+ L+IRD G+GMT E++ KN+GTIA SGT AF +++ + LIGQFGVGFY+ ++ AD Sbjct: 7 KFETEVQQLLDLVIHSLYSNKDIFLRELISNASDAIDKVLFESHQNAAVI-EGE-PEGKIKLIPDKDAGTLTIRDNGVGMTLEEVEKNIGTIAHSGTKAFLANLKEQNVADHPELIGQFGVGFYASFMVAD 135
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_METEP (Chaperone protein htpG OS=Methylobacterium extorquens (strain PA1) GN=htpG PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.464e-27 Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = 2 Query: 287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFV----EKMQTSGD---LNLIGQFGVGFYSVYLGAD 694 + E+ EF AEV RL+D+++++LYS+++IFLREL++NA+DA D+ RF +LT++ + D + I DK + L+I D GIGM+KEDL +NLGTIA+SGT AF E+ G+ +LIGQFGVGFYS ++ AD Sbjct: 1 MSETVERHEFGAEVGRLLDLVVHALYSDREIFLRELVANAADATDRRRFEALTNEALALPSD---ARVLIAPDKAARTLTISDAGIGMSKEDLAQNLGTIARSGTRAFSQALGERAAEGGEDQRPSLIGQFGVGFYSAFMVAD 140
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_METC4 (Chaperone protein htpG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=htpG PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.464e-27 Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = 2 Query: 287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFV----EKMQTSGD---LNLIGQFGVGFYSVYLGAD 694 + E+ EF AEV RL+D+++++LYS+++IFLREL++NA+DA D+ RF +LT++ + D + I DK + L+I D GIGM+KEDL +NLGTIA+SGT AF E+ G+ +LIGQFGVGFYS ++ AD Sbjct: 1 MSETVERHEFGAEVGRLLDLVVHALYSDREIFLRELVANAADATDRRRFEALTNEALALPSD---ARVLIAPDKAARTLTISDAGIGMSKEDLAQNLGTIARSGTRAFSQALGERAAEGGEDQRPSLIGQFGVGFYSAFMVAD 140
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27 Identity = 67/131 (51.15%), Postives = 97/131 (74.05%), Query Frame = 2 Query: 311 EFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF---VEKMQTSGDLNLIGQFGVGFYSVYLGAD 694 +F+ EV +L+D++I+SLYSNKDIFLRELISN+SDA+DK+ F + + V+ EG+ + +I++ DKE ++IRD G+GMT E++ KN+GTIA SGT AF +++ S LIGQFGVGFY+ ++ AD Sbjct: 7 KFETEVQQLLDLVIHSLYSNKDIFLRELISNSSDAIDKVLFEAHQNAAVI-EGE-PEGKIKLIPDKEAGTITIRDNGVGMTMEEVEKNIGTIAHSGTKAFLANLKEQNVSEHPELIGQFGVGFYASFMVAD 135
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.497e-27 Identity = 65/137 (47.45%), Postives = 96/137 (70.07%), Query Frame = 2 Query: 314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFV------EKMQTSGDLNLIGQFGVGFYSVYLGADYXEV 706 F+ EV +++ II +SLY+N++IFLREL+SNASDALDK+RF+ V+ + I I +DKE +IL+I D G+GMT+++L+ NLGTIA+SG+ FV E + + ++IG+FGVGFY+V++ AD EV Sbjct: 10 FRTEVRKMLHIITHSLYTNREIFLRELVSNASDALDKLRFIRSRGDAVV--APDLAPGIDISVDKEARILTIADTGVGMTRQELMDNLGTIARSGSEQFVADLAAAENAKDADAASIIGRFGVGFYAVFMVADRVEV 144
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HTPG_BUCBP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=htpG PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.261e-27 Identity = 65/134 (48.51%), Postives = 95/134 (70.90%), Query Frame = 2 Query: 290 RNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDL--NLIGQFGVGFYSVYL 685 +N + + F++E L+ ++I+SLYSN++IF RELISNA+DA+DK++F +++ E L E D T L I+I +K L+I D GIGM ED+I NLGTIAKSGT F++ + + + +LIGQFGVGFYS ++ Sbjct: 5 KNQKKTYNFKSETKELLHLMIHSLYSNREIFFRELISNAADAIDKLKFNAISAPE-LYEND-TNLYIRIFSNKNNNSLTISDNGIGMKYEDIINNLGTIAKSGTKEFIKTLNKNNKIKNDLIGQFGVGFYSSFI 136 The following BLAST results are available for this feature:
BLAST of FC875560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875560 ID=FC875560; Name=FC875560; organism=Citrus clementina; type=EST; length=751bpback to top |