FC875560

Overview
NameFC875560
Unique NameFC875560
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:43..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_DROVI (Heat shock protein 83 (Fragment) OS=Drosophila virilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.004e-38
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_DROSI (Heat shock protein 83 (Fragment) OS=Drosophila simulans GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.004e-38
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_DROME (Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.004e-38
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_DROAV (Heat shock protein 83 OS=Drosophila auraria GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.004e-38
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 9.148e-38
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.148e-38
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.148e-38
Identity = 85/134 (63.43%), Postives = 101/134 (75.37%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIAD 134
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.148e-38
Identity = 83/142 (58.45%), Postives = 104/142 (73.24%), Query Frame = 2 
Query:  293 NNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI*QH 718
            +  E F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G +  L+I I  +     L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+   VI +H
Sbjct:   10 DEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDTGKD--LKIDIVPNPRDPTLTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKH 149
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.560e-37
Identity = 83/140 (59.29%), Postives = 103/140 (73.57%), Query Frame = 2 
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXEVI*QH 718
            AE F FQAE+++L+ +IIN+ YSNK+IFLRELISNASDALDKIRF SLTDK  L      +L I++  DK  K LSI D G+GM K DL+ NLGTIA+SGT  F+E +Q   D+++IGQFGVGFYS YL A+   V  +H
Sbjct:    9 AETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDA--QPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKH 146
[Close]
BLAST of FC875560 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.038e-37
Identity = 82/131 (62.60%), Postives = 101/131 (77.10%), Query Frame = 2 
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I+I  +KE   L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLESGK--ELFIKIIPNKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD 136
The following BLAST results are available for this feature:
BLAST of FC875560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HSP83_DROVI7.004e-3863.43Heat shock protein 83 (Fragment) OS=Drosophila vir... [more]
HSP83_DROSI7.004e-3863.43Heat shock protein 83 (Fragment) OS=Drosophila sim... [more]
HSP83_DROME7.004e-3863.43Heat shock protein 83 OS=Drosophila melanogaster G... [more]
HSP83_DROAV7.004e-3863.43Heat shock protein 83 OS=Drosophila auraria GN=Hsp... [more]
HSP83_DROPS9.148e-3863.43Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROPE9.148e-3863.43Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP83_DROMI9.148e-3863.43Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
HS90B_CHICK9.148e-3858.45Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]
HSP83_IPONI1.560e-3759.29Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP83_ANOGA2.038e-3762.60Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]

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Properties
Property NameValue
Genbank descriptionC31405C07EF CTVClemen1 Citrus clementina cDNA clone C31405C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875560 ID=FC875560; Name=FC875560; organism=Citrus clementina; type=EST; length=751bp
GAATAGGCAATAATTTGATCATTTTTAGCTGATCGAAGATACTAGAACTA
TACTAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTCTCGCCCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAGTCATTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGGC
T
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