FC875561

Overview
NameFC875561
Unique NameFC875561
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC875561 vs. ExPASy Swiss-Prot
Match: MHT1_YEAST (Homocysteine S-methyltransferase 1 OS=Saccharomyces cerevisiae GN=MHT1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12
Identity = 55/181 (30.39%), Postives = 93/181 (51.38%), Query Frame = 3 
Query:   75 LIEKAGGCAVIDGGFATQLETHGASINDPLWSALYLI---------KQPHLVKRVHLEYLEAGADILVTSSYQATIPGFLSRGLSIEEAESLLEKSVTLAVEARDKFWDAVKKVPGHNYNRALVAASIGSYGAYLADGSEYSGNYGPGVDLEKLKDFHRRRLQVLVESGP-DLLAFETIPN 587
            ++E  G   ++DGG  T+LE  G +IN P+WSA             ++  +V+ ++ +++ AGA+IL+T +YQA          SI E  S+  K++       DK     ++  G    R L+  SIG + A+++   EY+G+YGP  +      F + +L+   ++   DL+ FETIPN
Sbjct:   10 IVEHPGKVLILDGGQGTELENRGININSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGANILMTITYQANFQ-------SISENTSI--KTLAAYKRFLDKIVSFTREFIGE--ERYLI-GSIGPWAAHVS--CEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIPN 176
The following BLAST results are available for this feature:
BLAST of FC875561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MHT1_YEAST8.178e-1230.39Homocysteine S-methyltransferase 1 OS=Saccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionC31405C08EF CTVClemen1 Citrus clementina cDNA clone C31405C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875561 ID=FC875561; Name=FC875561; organism=Citrus clementina; type=EST; length=732bp
GGTTGGTGAGCGTAAATCTAGAGACTTTTCTGAATATGGGCAAGGAAAAC
ACCACGGCGTCGTCTTTGGATGATCTAATTGAGAAAGCCGGCGGCTGTGC
TGTCATTGATGGAGGCTTCGCTACCCAGCTTGAGACTCACGGCGCCTCCA
TTAACGACCCTCTTTGGAGCGCGCTTTATTTGATCAAACAACCCCACCTC
GTCAAGCGGGTTCATTTGGAATACCTGGAGGCCGGTGCTGATATTTTGGT
CACTTCATCCTACCAGGCCACCATTCCAGGGTTTCTTTCCAGGGGATTGT
CAATCGAAGAAGCGGAATCGTTACTAGAGAAGAGCGTTACATTGGCTGTT
GAAGCCCGAGACAAGTTCTGGGATGCTGTAAAGAAGGTTCCGGGGCATAA
CTACAACCGAGCATTGGTTGCAGCTTCAATCGGAAGCTACGGAGCTTATC
TTGCCGATGGTTCTGAGTATAGTGGAAATTACGGACCTGGGGTAGATCTG
GAGAAGCTGAAAGATTTCCACCGGCGCAGATTGCAAGTCCTTGTCGAATC
AGGTCCAGATTTGCTTGCTTTTGAAACCATCCCCAATAAACTCGAGGCTC
AGGCATTGGTAGAGCTGCTGGAGGAAGAGAACATCCAAATCCCATCTTGG
ATCTGCTTCAGTTCCGTAGATGGTGAGAACGCCCCATCAGGAGAGAGCTT
TAAGGATGCCCTTGATATATAACAAGAGCGGC
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