FC875566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica GN=HSFB4B PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43 Identity = 97/204 (47.55%), Postives = 117/204 (57.35%), Query Frame = 2 Query: 71 AQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPES--------------------KNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYV 622 A + VPAPFL KTYQLVDDP TD ++SW E TF+VW+ +FA+DLLPNYFKHNNFSSFVRQLNTYGFRKIVAD+WEFANE FR+G + L EI RRK S+Q P + + S P G A LS++N +LRR N L SELA KK +++I FL +V Sbjct: 27 AGKPVPAPFLTKTYQLVDDPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRK-----SSQPPPPPMPHQPYHHHHHLNPFSLPPPPPAYHHHHLIQEEPATTAHCTVAGDGGEGGDFLAALSEDNRQLRRRNSLLLSELAHMKKLYNDIIYFLQNHV 225
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFB4C_ORYSJ (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica GN=HSFB4C PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.259e-42 Identity = 94/233 (40.34%), Postives = 132/233 (56.65%), Query Frame = 2 Query: 71 AQRSVPAPFLMKTYQLVDDPSTDDVISWNESG-ATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSP-----------------SNSGED------------------------------MGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVK 625 AQ++VPAPFL KTYQLVDDP+TD ++SW + +TF+VW+ +FA+D+LPNYFKHNNFSSFVRQLNTYGFRK+V ++WEFANE FR+G ++ LTEI RRKT++ +A + P + G+D +G + S ++ G+ A A L +EN +LRR N L ELA +K +++I F+ +V+ Sbjct: 17 AQKAVPAPFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLTEIHRRKTSSASTASPSPPPFFAPPHFPLFHHPGVAAAQHHHAFVGDDGVVAAHGIGMPFPQPHWREPNLPVATRLLALGGPAPSPSSAEAGGAGRAATAAVLMEENERLRRSNTALLQELAHMRKLYNDIIYFVQNHVR 249
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.484e-42 Identity = 86/190 (45.26%), Postives = 117/190 (61.58%), Query Frame = 2 Query: 56 NRERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKF--ADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEY 619 N A+ P PFL+KTY++V+DP+TD VISWNE G F+VW+ A+FA+DLLP FKH NFSSFVRQLNTYGFRK+ +WEF+NE FR+G RE ++ IRRRK+ ++ + T+ + E Q S ++ F L DEN L+ +NE LS EL + KK+C +L+ + Y Sbjct: 28 NSTSTAELQPPPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSATSSSFVYTALLDENKCLKNENELLSCELGKTKKKCKQLMELVERY 217
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.871e-38 Identity = 81/169 (47.93%), Postives = 105/169 (62.13%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ 586 + P PFL+KTY +VDDPSTD ++SW+ + +F+VW +FAKDLLP YFKHNNFSSFVRQLNTYGFRK+ D+WEFANE F RG + L I RRK A G + Q + N+ + M S+ VE KF L +E +L+RD L EL + ++Q Sbjct: 35 NAPPPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQ-----QQQPHGNAQQQMQPPGHSASVG---ACVEVGKFG-LEEEVERLKRDKNVLMQELVRLRQQ 194
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.871e-38 Identity = 83/195 (42.56%), Postives = 120/195 (61.54%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ---CDELITFLTEYVKVGPDQINRIM 655 S+P PFL KTY +V+DP+TD ++SW+ + +FIVW +F++DLLP YFKHNNFSSFVRQLNTYGFRK+ D+WEFANE F RG + L +I RRK+ G + +++P + G S ++ S VE KF L +E +L+RD L EL + ++Q D + L ++++V + +IM Sbjct: 48 SLPPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHG------SSSSNPQSQQLSQGQGSMAALSS----CVEVGKFG-LEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIM 231
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38 Identity = 80/173 (46.24%), Postives = 101/173 (58.38%), Query Frame = 2 Query: 68 MAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ 586 M + P PFL+KTY +VDDPSTD ++SW+ + +F+VW +FAKDLLP YFKHNNFSSFVRQLNTYGFRK+ D+WEFANE F RG + L I RRK A G + Q G + VE KF L +E +L+RD L EL + ++Q Sbjct: 33 MPSANAPPPFLVKTYDMVDDPSTDKIVSWSPTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQ--------QQQPHGHAQQQMQPPGHSASVGACVEVGKFG-LEEEVERLKRDKNVLMQELVRLRQQ 196
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.567e-36 Identity = 80/169 (47.34%), Postives = 104/169 (61.54%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ 586 + P PFL KTY +VDD +TD ++SW+ + +FIVWK +FA+DLLP FKHNNFSSFVRQLNTYGFRK+ D+WEFANE F RG + L I RRK A GQ G+ S ++G++ S VE KF L +E +L+RD L EL + ++Q Sbjct: 33 NAPPPFLSKTYDMVDDHNTDSIVSWSANNNSFIVWKPPEFARDLLPKNFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQ-----GQGHQRSQHSNGQN----------SSVSACVEVGKFG-LEEEVERLKRDKNVLMQELVRLRQQ 185
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFB4A_ORYSJ (Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica GN=HSFB4A PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.673e-36 Identity = 72/115 (62.61%), Postives = 91/115 (79.13%), Query Frame = 2 Query: 53 ANRERMAQRS---VPAPFLMKTYQLVDDPSTDDVISWN-----ESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTA 373 A R++ A S VPAPFL KTYQLVDDP+TD V+SW ES ++F+VW+ +FA+D+LPNYFKH+NFSSFVRQLNTYGFRK+V ++WEFANE FR+G ++ L EI RRK+A Sbjct: 9 AARQKAAAASASVVPAPFLTKTYQLVDDPATDHVVSWEDDDGGESASSFVVWRPPEFARDILPNYFKHSNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLCEIHRRKSA 123
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.559e-36 Identity = 78/169 (46.15%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ 586 + P PFLMKTY++VDDP+TD V+SW +F+VW T +FA+DLLP YFKH+NFSSFVRQLNTYGFRK+ D+WEFANE F RG + L I RRK T G + P P + VE KF + +E L+RD L EL + ++Q Sbjct: 33 TAPPPFLMKTYEMVDDPATDAVVSWGPGNNSFVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKTINRRK-------PTHGNNQVQQP------------QLPAAPVPACVEVGKFG-MEEEIEMLKRDKNVLMQELVRLRQQ 181
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.859e-35 Identity = 80/169 (47.34%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQ 586 S+P PFL KTY +VDDP TDDV+SW+ +F+VW +FAK LP YFKHNNFSSFVRQLNTYGFRK+ D+WEFANE F RG ++ L I RRK A Q Q P +G+ VE KF L +E +L+RD L EL + ++Q Sbjct: 20 SIP-PFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPAQVQPPQ--------QPQVQHSSVGA------------CVEVGKFG-LEEEVERLQRDKNVLMQELVRLRQQ 166 The following BLAST results are available for this feature:
BLAST of FC875566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875566 ID=FC875566; Name=FC875566; organism=Citrus clementina; type=EST; length=710bpback to top |