FC875566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA9_ORYSJ (Heat stress transcription factor A-9 OS=Oryza sativa subsp. japonica GN=HSFA9 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 73/181 (40.33%), Postives = 103/181 (56.91%), Query Frame = 2 Query: 38 GGW*GANRERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAK 580 GG AN + + S APFL K Y +V DP+TD+VISW E G +F++W + F +DL +FKH+NF+SF+RQLNTYGFRK+ D+WE+ANE F G + L I+RRK K+ SPS E + ++P ++N +E K+ L E L+RD L +L + Sbjct: 32 GGASTANGPVVPKPSEVAPFLTKVYDMVSDPATDNVISWAEGGGSFVIWDSHAFERDL-HRHFKHSNFTSFIRQLNTYGFRKVHPDRWEWANEGFIMGQKHLLKTIKRRK-----------KSSQESPS---EIQKAPVKTAPGTEN---IEIGKYGGLEKEVETLKRDKALLMQQLVDLR 194
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFC1A_ORYSJ (Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica GN=HSFC1A PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 73/187 (39.04%), Postives = 106/187 (56.68%), Query Frame = 2 Query: 89 APFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTS----SPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQ-------AKKQCDELITFLTE 616 APF+ KTYQ+V DP TD ++ W +F+V A F++ LLP +FKH NFSSFVRQLNTYGFRK+ D+WEFA+E+F RG L I RRK G+ G + +GE + + + S E ++ AK A L +E +LR + + ELA+ +++ D+L++FL + Sbjct: 25 APFVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAAFSQLLLPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRK-KRGEGGGGGGGASCSFGGGAGEHQVAAAAASVGMSGEEEDAAEDVLAKEAALFEEVQRLRHEQTAIGEELARMSQRLQATERRPDQLMSFLAK 210
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA6A_ARATH (Heat stress transcription factor A-6a OS=Arabidopsis thaliana GN=HSFA6A PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28 Identity = 56/103 (54.37%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 86 PAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQT 394 P FL KTY +V+D ST++++SW+ +FIVW+ FA LP FKHNNFSSFVRQLNTYGF+KI ++WEFANE+F +G R L I+RRKT++ Q+ Sbjct: 17 PTAFLTKTYNIVEDSSTNNIVSWSRDNNSFIVWEPETFALICLPRCFKHNNFSSFVRQLNTYGFKKIDTERWEFANEHFLKGERHLLKNIKRRKTSSQTQTQS 119
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28 Identity = 65/175 (37.14%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 92 PFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTE 616 PFL KTY++VDD S+D V++W+E+ +FIV A+F++DLLP +FKH NFSSF+RQLNTYGFRK+ +KWEF N++F RG + I RRK S +A +P E S KN+ A+ + E + TL L ++ ++ ++++ Sbjct: 13 PFLTKTYEMVDDSSSDSVVAWSENNKSFIVKNPAEFSRDLLPRFFKHKNFSSFIRQLNTYGFRKVDPEKWEFLNDDFVRGRPYLMKNIHRRKPVHSHSLV---NLQAQNPLTESE-RRSMEDQIERLKNEKEGLLAELQNQEQERKEFELQVTTLKDRLQHMEQHQKSIVAYVSQ 183
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA9_ARATH (Heat stress transcription factor A-9 OS=Arabidopsis thaliana GN=HSFA9 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 61/178 (34.27%), Postives = 98/178 (55.06%), Query Frame = 2 Query: 92 PFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVK 625 PFL KT+++VDD TD V+SW+ + +FI+W + +F+++LLP YFKH NFSSF+RQLN+YGF+K+ +D+WEFANE F+ G + L I+RR +K T N +T T K + S + L + + + T+ ++ + +++F + K Sbjct: 71 PFLRKTFEIVDDKVTDPVVSWSPTRKSFIIWDSYEFSENLLPKYFKHKNFSSFIRQLNSYGFKKVDSDRWEFANEGFQGGKKHLLKNIKRR-------------SKNTKCCNKEASTTTTETEVESLKEEQSPMRLEMLKLKQQQEESQHQMVTVQEKIHGVDTEQQHMLSFFAKLAK 235
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFC2B_ORYSJ (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica GN=HSFC2B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.736e-27 Identity = 77/202 (38.12%), Postives = 109/202 (53.96%), Query Frame = 2 Query: 89 APFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTAT--GQSAQTAGKTKATSPSNSG----EDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIMGQGSCGS 676 APF+ KTY++V+DP TD VI W + +F+V F++ LLP +FKHNNFSSFVRQLNTYGFRK+ D+WEFA+ +F RG L I RR +A G GK + S G EDM +T K + + A A RR ET +++ +++ FL + V D+++R++G G G+ Sbjct: 10 APFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRRGSAAAGGGGGGGGGKRRDASADGGGGGGDEDMTMVATEVVRLKQEQRTIDDRVA------AMWRRVQET--------ERRPKQMLAFLLKVVG-DRDKLHRLVGGGGNGN 196
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26 Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 2 Query: 86 PAPFLMKTYQLVDDPSTDDVISWNE--SGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTA 373 PAPF+ KTY++V D +TD V+SW SGA+F+VW A +LP +FKH NFSSFVRQLNTYGFRK+ D+WEFANE F G + L I+RR+ + Sbjct: 91 PAPFVAKTYEMVADAATDAVVSWGPGGSGASFVVWDPHALAAGVLPRFFKHANFSSFVRQLNTYGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRRVS 188
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSFA8_ARATH (Heat stress transcription factor A-8 OS=Arabidopsis thaliana GN=HSFA8 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26 Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 2 Query: 89 APFLMKTYQLVDDPSTDDVISWNESGA-TFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMG 445 APFL K Y +VDD +TD +ISW+ S +F++ T F+ LLP YFKH+NFSSF+RQLN YGFRK+ AD+WEFAN+ F RG ++ L + RRK QS++ + K ++TS + + E G Sbjct: 18 APFLRKCYDMVDDSTTDSIISWSPSADNSFVILDTTVFSVQLLPKYFKHSNFSSFIRQLNIYGFRKVDADRWEFANDGFVRGQKDLLKNVIRRKNV--QSSEQS-KHESTSTTYAQEKSG 134
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFC2A_ORYSJ (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica GN=HSFC2A PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.277e-26 Identity = 67/187 (35.83%), Postives = 105/187 (56.15%), Query Frame = 2 Query: 89 APFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINR 649 APF+ KTY++VDDP+TD VI+W +F+V F++ LLP +FKH+NFSSFVRQLNTYGFRK+ D+WEFA+ +F RG L I RR + G + + K +A GE ++ + + +V + A L E ++ + + + +++ +++ FL + VG Q+ R Sbjct: 13 APFVAKTYRMVDDPATDGVIAWGRDSNSFVVADPFAFSQTLLPAHFKHSNFSSFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRRSSGGGGAKR---KEEAGGCGGGGE------AAAGDVDEESAVVALEVARLRREQREIEGRVAAMWRRVQETERRPKQMLAFLVKV--VGDPQVLR 188
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HFC1B_ORYSJ (Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica GN=HSFC1B PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.295e-26 Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = 2 Query: 89 APFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTE 616 APF+ KT+ +V DPST+ V+ W +G TF+V A F+ LLP+YFKH NF+SFVRQLNTYGFRK+ D+WEFA+E+F RG + L I R+K G G + +G++E + L +E + + + + L A+ + +++ FL + Sbjct: 23 APFVAKTFHMVSDPSTNAVVRWGGAGNTFLVLDPAAFSDFLLPSYFKHRNFASFVRQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKK------------------KKGGAAPGCRELCEEGEEVRGTIEAVQ--RLREEQRGMEEELQAMDQRLRAAESRPGQMMAFLAK 178 The following BLAST results are available for this feature:
BLAST of FC875566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875566 ID=FC875566; Name=FC875566; organism=Citrus clementina; type=EST; length=710bpback to top |