FC875566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF_XENLA (Heat shock factor protein OS=Xenopus laevis GN=hsf1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.003e-24 Identity = 72/204 (35.29%), Postives = 101/204 (49.51%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIV-----------ADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIMG 658 +VPA FL K + LV+DP TD +I W+ G +F V+ FAK++LP YFKHNN +SFVRQLN YGFRK+V D EF + F RG + L I+R+ T TK+ + +G + K + + + EN L R+ +L + Q +K ++LI FL V Q NRI+G Sbjct: 11 NVPA-FLAKLWTLVEDPDTDPLICWSPEGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPYFIRGQEQLLENIKRK-------VNTMSATKSDEVKVRQDSVGKLISDVQSMKGKQESIDGRLLSMKHENEALWREVASLRQKHTQQQKVVNKLIQFLVSLV-----QSNRILG 201
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF1_MOUSE (Heat shock factor protein 1 OS=Mus musculus GN=Hsf1 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23 Identity = 75/204 (36.76%), Postives = 102/204 (50.00%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIV-----------ADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIMG 658 +VPA FL K + LV DP TD +I W+ SG +F V+ FAK++LP YFKHNN +SFVRQLN YGFRK+V D EF + F RG + L I+R+ T+ K + S + T K + +K + EN L R+ +L + AQ +K ++LI FL V Q NRI+G Sbjct: 14 NVPA-FLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLKSEDIKIRQDSVTR-------LLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLV-----QSNRILG 204
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF1_HUMAN (Heat shock factor protein 1 OS=Homo sapiens GN=HSF1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23 Identity = 75/204 (36.76%), Postives = 102/204 (50.00%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIV-----------ADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIMG 658 +VPA FL K + LV DP TD +I W+ SG +F V+ FAK++LP YFKHNN +SFVRQLN YGFRK+V D EF + F RG + L I+R+ T+ K + S + T K + +K + EN L R+ +L + AQ +K ++LI FL V Q NRI+G Sbjct: 14 NVPA-FLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLKSEDIKIRQDS-------VTKLLTDVQLMKGKQECMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLV-----QSNRILG 204
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF1_CHICK (Heat shock factor protein 1 OS=Gallus gallus GN=HSF1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23 Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 2 Query: 95 FLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIV-----------ADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIMG 658 FL K + LV+DP TD +I W+ SG +F V+ FAK++LP YFKHNN +SFVRQLN YGFRK+V D EF + F RG L I+R+ T+ K + +++ T K + +K + EN L R+ +L + AQ +K ++LI FL V Q NRI+G Sbjct: 23 FLTKLWTLVEDPETDPLICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPEKDDTEFQHPYFIRGQEHLLENIKRKVTSVSSIKNEDIKVRQ-------DNVTKLLTDIQVMKGKQESMDSKLIAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLV-----QSNRILG 209
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF1_BOVIN (Heat shock factor protein 1 OS=Bos taurus GN=HSF1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 74/204 (36.27%), Postives = 101/204 (49.51%), Query Frame = 2 Query: 80 SVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIV-----------ADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGPDQINRIMG 658 +VPA FL K + LV DP TD +I W+ SG +F V FAK++LP YFKH+N +SFVRQLN YGFRK+V D EF + F RG + L I+R+ T+ K + S + T K + +K + EN L R+ +L + AQ +K ++LI FL V Q NRI+G Sbjct: 14 NVPA-FLTKLWTLVSDPDTDALICWSPSGNSFHVLDQGQFAKEVLPKYFKHSNMASFVRQLNMYGFRKVVHIEQGGLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSVSTLRSEDIKIRQDS-------VTKLLTDVQLMKGKQESMDSKLLAMKHENEALWREVASLRQKHAQQQKVVNKLIQFLISLV-----QSNRILG 204
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF3_CHICK (Heat shock factor protein 3 OS=Gallus gallus GN=HSF3 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.869e-22 Identity = 63/197 (31.98%), Postives = 99/197 (50.25%), Query Frame = 2 Query: 71 AQRSVPAP-FLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVA-----------DKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVK 625 A + P P FL K + LV+DP +DDVI W+ +G F + FAK+LLP YFKHNN SSF+RQLN YGFRK+VA EF + F++G+ L I+R+ +A + ED+ + E + Q + + A++ EN L ++ L + +Q +K +++ F+ ++ Sbjct: 10 APGAAPVPGFLAKLWALVEDPQSDDVICWSRNGENFCILDEQRFAKELLPKYFKHNNISSFIRQLNMYGFRKVVALENGMITAEKNSVIEFQHPFFKQGNAHLLENIKRKVSA----------VRTEDLKVCAEDLHKVLSEVQEMREQQNNMDIRLANMKRENKALWKEVAVLRQKHSQQQKLLSKILQFILSLMR 196
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF4_HUMAN (Heat shock factor protein 4 OS=Homo sapiens GN=HSF4 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 71/195 (36.41%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 83 VPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVA-----------DKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGP 634 VPA FL K + LV DP TD +I W+ SG +F+V + FAK++LP YFKH+N +SFVRQLN YGFRK+V+ D EF + +F RG + L +RR+ A G P + G +G Q S E A+ +L +N L R+ TL Q + +LI L ++ GP Sbjct: 18 VPA-FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPA------LRGDDGRWRPEDLGRLLGEVQALRGV---QESTE-ARLRELRQQNEILWREVVTLRQSHGQQHRVIGKLIQCLFGPLQAGP 201
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF_YEAST (Heat shock factor protein OS=Saccharomyces cerevisiae GN=HSF1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 66/193 (34.20%), Postives = 97/193 (50.26%), Query Frame = 2 Query: 59 RERMAQRSVPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKI-----------VADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSN------SGEDMGSTSTSSPES-KNQGSVETAKFADLSDE-NAKLRRDNETLSSELAQAK 580 R + +S PA F+ K + +++D S +I W E G +FIV +F +LP YFKH+NF+SFVRQLN YG+ K+ DKW+F NENF RG + L +I R+K ++ +G + SN +G + + + SS S N G + K L +E N + D + EL Q K Sbjct: 164 RRYQSHKSRPA-FVNKLWSMLNDDSNTKLIQWAEDGKSFIVTNREEFVHQILPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSIQSSSDDKWQFENENFIRGREDLLEKIIRQKGSSNNHNSPSGNGNPANGSNIPLDNAAGSNNSNNNISSSNSFFNNGHLLQGKTLRLMNEANLGDKNDVTAILGELEQIK 355
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF_SCHPO (Heat shock factor protein OS=Schizosaccharomyces pombe GN=hsf1 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 62/184 (33.70%), Postives = 94/184 (51.09%), Query Frame = 2 Query: 95 FLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKI------------VADKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFL 610 F K Y +V+D STD +I W++ G +F+V DFAK +LP YFKHNNFSSFVRQLN YGF K+ + EFAN NF+R E L + R+K ++ SN+ DM + S+ + Q + + + + +NA L ++N + ++ D+++ FL Sbjct: 53 FSNKLYNMVNDSSTDSLIRWSDRGDSFLVIGHEDFAKLVLPRYFKHNNFSSFVRQLNMYGFHKVPHIQQGVLQSDSPNELLEFANPNFQRDQPELLCLVTRKKAG----------SQPVEESNTSLDMSTISSELQNIRIQQMNLSNELSRIQVDNAALWQENMENRERQRRHQETIDKILRFL 226
BLAST of FC875566 vs. ExPASy Swiss-Prot
Match: HSF4_MOUSE (Heat shock factor protein 4 OS=Mus musculus GN=Hsf4 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20 Identity = 70/195 (35.90%), Postives = 98/195 (50.26%), Query Frame = 2 Query: 83 VPAPFLMKTYQLVDDPSTDDVISWNESGATFIVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVA-----------DKWEFANENFRRGHREFLTEIRRRKTATGQSAQTAGKTKATSPSNSGEDMGSTSTSSPESKNQGSVETAKFADLSDENAKLRRDNETLSSELAQAKKQCDELITFLTEYVKVGP 634 VPA FL K + LV DP TD +I W+ SG +F+V + FAK++LP YFKH+N +SFVRQLN YGFRK+V+ D EF + +F RG + L +RR+ A G P + +G Q S E A+ +L +N L R+ TL +Q + +LI L ++ GP Sbjct: 17 VPA-FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLERVRRKVPA------LRGDDSRWRPEDLSRLLGEVQALRGV---QESTE-ARLQELRQQNEILWREVVTLRQSHSQQHRVIGKLIQCLFGPLQTGP 200 The following BLAST results are available for this feature:
BLAST of FC875566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875566 ID=FC875566; Name=FC875566; organism=Citrus clementina; type=EST; length=710bpback to top |