FC875568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.635e-62 Identity = 119/193 (61.66%), Postives = 136/193 (70.47%), Query Frame = 2 Query: 137 GERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPC-RGKYY-GRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 G D G D G L II + F+ LL +RND RCPA GFYTY+AFI AAK FP FGN+G++ MR REIAAF QT HETTGGW DAP G YAWGYC++ EI+ PYC + NY C GK Y GRGPIQL+WNYNY CG+DL LL P+L+ TDPV+SFK+AIWFWM Q PKPSCH VIT W PS Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDL--KLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPS 265
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.635e-62 Identity = 117/191 (61.26%), Postives = 139/191 (72.77%), Query Frame = 2 Query: 149 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTG--GWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ R REIAAF AQT HETTG GW AP G YAWGYC+ E++PPS YC + NYPC GK Y+GRGP+QL+WNYNY +CG + G +LLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VI W PS Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI--GVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPS 230
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.635e-62 Identity = 117/191 (61.26%), Postives = 139/191 (72.77%), Query Frame = 2 Query: 149 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTG--GWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FPAF +G++ R REIAAF AQT HETTG GW AP G YAWGYC+ E++PPS YC + NYPC GK Y+GRGP+QL+WNYNY +CG + G +LLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VI W PS Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAI--GVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPS 252
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 2.790e-62 Identity = 114/200 (57.00%), Postives = 140/200 (70.00%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCRG--KYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CG G C + +G + GG L +IS + F ++L +RND C + FYTYDAF+ AAKAFP F N G+ + REIAAF QT HETTGGW AP G YAWGYCF+ E PS YC + +PC +YYGRGPIQ++WNYNY +CG + G +LLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VIT W PS Sbjct: 51 CGDG--CQSQCSG-SSGGGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLRE-QNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAI--GVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPS 244
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.643e-62 Identity = 115/203 (56.65%), Postives = 140/203 (68.97%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTD---GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CGSG C + G G GG+LG IS MF+ +L +RN+ C + FY+Y+AFI AA++FP FG SG+ R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY CG + G +LLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI W PS Sbjct: 57 CGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPS 256
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.116e-62 Identity = 114/201 (56.72%), Postives = 139/201 (69.15%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCNLN--YPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 C SG G G GG++G +IS MF+ +L +RND C + FY+Y+AFI AA++F FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY CG + G +LLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI W+PS Sbjct: 58 CPSGPSPKPPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPS 256
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.808e-61 Identity = 116/201 (57.71%), Postives = 140/201 (69.65%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CG G C + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY CG + G +LLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VIT W+PS Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPS 246
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.084e-61 Identity = 109/186 (58.60%), Postives = 134/186 (72.04%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F FG +G+ T R RE+AAFFAQT HETTGGW AP G YAWGYC++ E P YC + +PC KYYGRGPIQ+++NYNY CG + G+ LLNNPDL+AT+ V+SFKSAIWFWMTAQ PKPSCH+VIT W PS Sbjct: 79 GPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAI--GQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPS 262
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.974e-61 Identity = 114/201 (56.72%), Postives = 139/201 (69.15%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY CG + G +LLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VIT W+PS Sbjct: 53 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPS 250
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.974e-61 Identity = 111/187 (59.36%), Postives = 135/187 (72.19%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T R REIAAFFAQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY CG + G +LLNNPDL+ATD ++SFKSAIWFWMT Q PKPSCH+VIT W+PS Sbjct: 60 GGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPS 244 The following BLAST results are available for this feature:
BLAST of FC875568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875568 ID=FC875568; Name=FC875568; organism=Citrus clementina; type=EST; length=703bpback to top |