FC875568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.410e-60 Identity = 114/201 (56.72%), Postives = 138/201 (68.66%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T R REIAAF AQT HETTGGW AP G YAWGYCF+ E P YC + +PC KY+GRGPIQ++ NYNY CG + G +LLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VIT W+PS Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAI--GVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPS 246
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.399e-59 Identity = 104/184 (56.52%), Postives = 134/184 (72.83%), Query Frame = 2 Query: 161 TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYCN-LNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F FG +G++ + +E+AAF AQT HETTGGW AP G YAWGYCF+SE + YC+ ++PC KYYGRGPIQLT NYNY G+ + E+L+NNPDLL+T+P +SFK+AIWFWMT Q KPS H+VIT W PS Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAI--KEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPS 256
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.444e-58 Identity = 114/210 (54.29%), Postives = 142/210 (67.62%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFPAFG +GN R RE+AAF QT HETTGGW AP G ++WGYCF E +PPS YC + +PC KYYGRGPIQL++N+NY G + G +LL+NPDL+ATD +SFK+A+WFWMT Q KPS H+VIT W PS Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAI--GVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPS 266
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.213e-57 Identity = 108/183 (59.02%), Postives = 130/183 (71.04%), Query Frame = 2 Query: 167 GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY G + G +LL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VIT +W PS Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAI--GVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPS 257
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 221.09 bits (562), Expect = 4.609e-57 Identity = 114/214 (53.27%), Postives = 139/214 (64.95%), Query Frame = 2 Query: 116 CGSGVVCGE----RDTGHG----------TDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR-GK-YYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CGS CG+ + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF FG +G R RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +PC GK YYGRGPIQL+ NYNY G + G +LL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VIT +W PS Sbjct: 43 CGSTPYCGDGCQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAI--GVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPS 254
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.027e-56 Identity = 105/186 (56.45%), Postives = 128/186 (68.82%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ R R++AAF AQT HETTGGW AP G +AWGYCF E + YC + +PC +YYGRGPIQL+ NYNY G + G +LL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VIT +W PS Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAI--GVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPS 202
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.341e-56 Identity = 105/186 (56.45%), Postives = 127/186 (68.28%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFP FG +G+ + RE+AAF AQT HETTGGW AP G +AWGYCF E S YC + +PC +YYGRGPIQL+ NYNY G + G +LL NPDL+ATD + FK+AIWFWMTAQPPKPS H VI +W PS Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAI--GVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPS 202
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.902e-56 Identity = 107/212 (50.47%), Postives = 138/212 (65.09%), Query Frame = 2 Query: 116 CGSGVVCGERDTGH----------GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEI--SPPSPYC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 CGSG C + +G G G + I+SR +F+ +L +RND CPA+ FYTYDAF+ AA AFP+F +G+ R RE+AAF AQT HETTGGW AP G Y+WGYCF E + S YC + +PC KYYGRGPIQ+++NYNY G+ + G LL+NPDL+A+D +SFK+A WFWMT Q PKPSCH V+T +W P+ Sbjct: 51 CGSG--CQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAI--GSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPN 258
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 5.096e-56 Identity = 108/202 (53.47%), Postives = 134/202 (66.34%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSP-YC--NLNYPCRG--KYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 C G CG T + GG + IIS +F+ +L +RND C A+GFYTYDAF+ AA A+P F +G+ RE+AAF AQT HETTGGW AP G Y+WGYCF E + +P YC +PC KYYGRGPIQ+T+NYNY G+ + G +LLNNPDL+A+D +SFK+A WFWMT Q PKPSCH VIT +W PS Sbjct: 57 CSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAI--GSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPS 254
BLAST of FC875568 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 8.692e-56 Identity = 101/180 (56.11%), Postives = 126/180 (70.00%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRTREIAAFFAQTGHETTGGWRDAPGGEYAWGYCFISEISPPSPYC--NLNYPCR--GKYYGRGPIQLTWNYNYLRCGEDLGPGEELLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVITDEWKPS 703 + +IS+ +FE +L +RND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYC+ E P YC + +PC KY+GRGPIQ+++NYNY G + G LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VIT W PS Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAI--GVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPS 182 The following BLAST results are available for this feature:
BLAST of FC875568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875568 ID=FC875568; Name=FC875568; organism=Citrus clementina; type=EST; length=703bpback to top |