FC875579

Overview
NameFC875579
Unique NameFC875579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C64_ORYSJ (Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 66/204 (32.35%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  123 GVFDGHG--GSRAAEYLKEHLFENLLKHPQFM------TDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGK------AIPLSEDHKPNRCDERKRIENAGGVV-----------MWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656
            GVFDGHG  G   A  +++ L   L+   +           + A +  Y+  D D            GSTA T + +G+ LY+AN+GDSR V+           A+ L+ D KP+   E +RI+   G V           +W       G LAM+RAFG+  LK + V++ PE     + E  + ++LASDG+WDV+ N++AV
Sbjct:   86 GVFDGHGPHGHVVARRVRDSLPLRLMSAARDSGADMPAAAWRKAFARAYKAMDKDLRSHPSLDCFCSGSTAVTVLKLGSDLYMANIGDSRAVLGSREATGGGMVAVQLTVDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPG-LAMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAV 288          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.134e-15
Identity = 62/224 (27.68%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  108 AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL-AISETYQQTDVDFLESERDTYRDD------GSTASTAILVGNHLYVANVGDSRTVISK----AGKAIP--LSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 662
            A  + GV+DGHGG+ A+ +L+  LF ++ +  +         I   +   + +FL+  R  +R        GS      + G+ LYVAN+GDSR V+ +     G A+   L+++H     + R+ +     ++A  VV   G WRV G++ +SR  G+  LK+                      + AEP IQ  ++      L+ ASDGLW+ + ++ AV +
Sbjct:   58 AATLVGVYDGHGGADASRFLRSRLFPHVQRFEKEQGGMSTEVIRRAFGAAEEEFLQQVRQAWRQRPKMAAVGSCCLLGAISGDTLYVANLGDSRAVLGRRVVGGGVAVAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQVSRTIGDVYLKKQEYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQI 281          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.134e-15
Identity = 62/224 (27.68%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  108 AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL-AISETYQQTDVDFLESERDTYRDD------GSTASTAILVGNHLYVANVGDSRTVISK----AGKAIP--LSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 662
            A  + GV+DGHGG+ A+ +L+  LF ++ +  +         I   +   + +FL+  R  +R        GS      + G+ LYVAN+GDSR V+ +     G A+   L+++H     + R+ +     ++A  VV   G WRV G++ +SR  G+  LK+                      + AEP IQ  ++      L+ ASDGLW+ + ++ AV +
Sbjct:   58 AATLVGVYDGHGGADASRFLRSRLFPHVQRFEKEQGGMSTEVIRRAFGAAEEEFLQQVRQAWRQRPKMAAVGSCCLLGAISGDTLYVANLGDSRAVLGRRVVGGGVAVAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQVSRTIGDVYLKKQEYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQI 281          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C64_ARATH (Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.494e-14
Identity = 61/235 (25.96%), Postives = 105/235 (44.68%), Query Frame = 3
Query:   87 TSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLK---HPQFMTDTKLAISETYQQTDVDFLE------SERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKA------GKAIPLSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            +S+  G      GV+DGHGG   + ++ +H+F +L +     Q M+     I + +Q T+  FL         R      GS    +++    LYVAN GDSR V+ +         A  LS +H  +    R+ +     ++   VV+    WRV G++ +SR+ G+  LK+                      + AEP I    ++   + ++ ASDGLW+ + N++AV + +
Sbjct:   71 SSHDSGPFGTFVGVYDGHGGPETSRFINDHMFHHLKRFTAEQQCMSSE--VIKKAFQATEEGFLSIVTNQFQTRPQIATVGSCCLVSVICDGKLYVANAGDSRAVLGQVMRVTGEAHATQLSAEHNASIESVRRELQALHPDHPDIVVLKHNVWRVKGIIQVSRSIGDVYLKRSEFNREPLYAKFRLRSPFSKPLLSAEPAITVHTLEPHDQFIICASDGLWEHMSNQEAVDIVQ 303          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: Y9461_DICDI (Probable protein phosphatase DDB_G0279461 OS=Dictyostelium discoideum GN=DDB_G0279461 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 64/221 (28.96%), Postives = 107/221 (48.42%), Query Frame = 3
Query:   51 KRATMEDFYDIKTSNVDGQ--AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDF-----LESERDTYRDDGSTASTAIL--VGNHLYV--ANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF---VVAEPEIQ-DLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            K   MED Y  +    D Q   + +F +FDGH G   A   KE +F N+L      T  +      Y    V       ++++   +  +G+TA+  ++   G+  +V  ANVGDS   +S   + + LS+DH+    +E +RI+N  G+ +  G  R+ G L +SRA G+  +K     +  EP +   + +      L++ASDGLWDV+    A+ + +
Sbjct:  755 KPMEMEDVYLTQYPLGDDQDSQIALFAIFDGHSGKGCAVAAKE-IFPNILLKYIKSTKNENGGKPIYDMRGVFLNAFKEVDAQLSKFEYEGATATVCLVWRAGHQRFVQSANVGDSTAFLSYGNETLFLSKDHRATDPEEIQRIKN-DGITLTEGQTRING-LMVSRALGDHFIKHLNCGLSGEPYVSPPISITPFHSHLIVASDGLWDVISGNRAMEIVK 972          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C72_ARATH (Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana GN=At5g26010 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 66/209 (31.58%), Postives = 97/209 (46.41%), Query Frame = 3
Query:  123 GVFDGHG--GSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD----------DGSTASTAILVGNHLYVANVGDSRTVISKAG-----KAIPLSEDHKPNRCDERKRIENAGGVV-----------MWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 662
            GVFDGHG  G   ++ ++  L   LL   + +        E   + +     + R   R+           GST   AI  G+ L +AN+GDSR V+         KA+ L+ D  P+   E +RI    G V           +W     + G LAMSRAFG+  LK   V+A PEI    +    + LVLA+DG+WD++ N++ V+L
Sbjct:   75 GVFDGHGKNGHMVSKMVRNRLPSVLLALKEELNQESNVCEEEASKWEKACFTAFRLIDRELNLQVFNCSFSGSTGVVAITQGDDLVIANLGDSRAVLGTMTEDGEIKAVQLTSDLTPDVPSEAERIRMCKGRVFAMKTEPSSQRVWLPNQNIPG-LAMSRAFGDFRLKDHGVIAVPEISQHRITSKDQFLVLATDGVWDMLSNDEVVSL 282          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C36_ORYSJ (Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 73/241 (30.29%), Postives = 110/241 (45.64%), Query Frame = 3
Query:   63 MEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENL---LKHPQFMTDTKLAISETYQQTDVDFLE--SERDTYRDDGSTASTAILVG----NHLYVANVGDSRTVISK----AGK--AIPLSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 662
            +ED   +++      A C+ GVFDGH G  AA +  +HL  NL      P+ +T    AI + +  T+  FL   S     + D +T  T  LVG      L+VAN+GDSR V+ K    AG+  A  LS +H  N  D R+ +     ++   V +  G WRV G++ +SR+ G+  LK                       + A P I    +      ++ ASDGLW+ + N+ AV +
Sbjct:   72 LEDQCRVESGPPPLAATCI-GVFDGHAGPDAARFACDHLLPNLREAASGPEGVTAD--AIRDAFLATEEGFLAVVSRMWEAQPDMATVGTCCLVGVVHQRTLFVANLGDSRAVLGKKVGRAGQITAEQLSSEHNANEEDVRQELMAQHPDDPQIVALKHGVWRVKGIIQVSRSLGDAYLKHSQYNTEQIKPKFRLPEPFSRPILSANPSIIARCLQPSDCFIIFASDGLWEHLSNQQAVEI 309          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.951e-14
Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  300 GSTASTAILVGNHLYVANVGDSRTVISKAGK-----AIPLSEDHKPNRCDERKRIENAGGVV-----------MWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 662
            G+TA T I  G +L V NVGDSR V+          A+ L+ D KPN   E +RI    G V           +W       G LAM+RAFG+  LK F +++ P++   ++ E  E +VLA+DG+WDV+ NED VA+
Sbjct:  216 GTTAVTLIKQGQYLVVGNVGDSRAVMGTRDSENTLVAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPG-LAMARAFGDFCLKDFGLISVPDVSFRQLTEKDEFIVLATDGIWDVLSNEDVVAI 352          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.548e-14
Identity = 62/190 (32.63%), Postives = 96/190 (50.53%), Query Frame = 3
Query:  159 EYLKEH-----LFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVI---SKAGKAIP--LSEDHKPNRCDERKRIENAGGVV-----------MWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVAL 662
            +Y+K+      L  +++K  +FM        E   Q DVD   S        G+TA T +  G HL + N+GDSR V+   +K  K +P  L+ED KP+   E +RI+   G +           +W       G LAM+RAFG+  LK F +++ P++    + E  E +VLA+DG+WD + NE+ V +
Sbjct:  169 DYVKDQDMIQMLIGSIVKAYRFMD------KELKMQVDVDCFCS--------GTTAVTMVKQGQHLVIGNIGDSRAVLGVRNKDNKLVPFQLTEDLKPDVPAEAERIKRCRGRIFALRDEPGVARLWLPNHNSPG-LAMARAFGDFCLKDFGLISVPDVSYRRLTEKDEFVVLATDGIWDALTNEEVVKI 343          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.328e-14
Identity = 76/275 (27.64%), Postives = 120/275 (43.64%), Query Frame = 3
Query:   15 GKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMF-GVFDGHGG--------------SRAAEYLKEH-------------LFENLL----------------KHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGK-----AIPLSEDHKPNRCDERKRIENAGGVV-----------MWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656
            G + C ++  +GK+ T +D   +   N +G++  +F GVFDGHG               SR  + + E              L ENL                 +H +F    K +  + ++  D +            G+TA T I  G+ L V N+GDSR V+    +     A  L+ D KP+   E +RI    G V           +W       G LAM+RAFG+  LK F +++ P++   ++ E  E +VLA+DG+WDV+ N++ V
Sbjct:   42 GNVACLFTR-QGKKGTNQDAM-VAWENYNGRSDTVFCGVFDGHGPHGHLIARKVRDILPSRLCDLIYEDCGDSPTSNSDVSTLEENLSPYADAECRSPTLAGQKEHQEFFNAMKESFRKAFKNVDKELKLQRNIDSICSGTTAVTLIKQGHDLIVGNLGDSRAVLGTRDQNDKLVAHQLTVDLKPDHPREARRIRRCNGRVFAHQDEPDVARLWLPNCNSPG-LAMARAFGDFCLKDFGLISVPDVTYRQITEKDEFIVLATDGVWDVLSNQEVV 313          
The following BLAST results are available for this feature:
BLAST of FC875579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
P2C64_ORYSJ3.931e-1532.35Probable protein phosphatase 2C 64 OS=Oryza sativa... [more]
P2C34_ORYSJ5.134e-1527.68Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C34_ORYSI5.134e-1527.68Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C64_ARATH1.494e-1425.96Probable protein phosphatase 2C 64 OS=Arabidopsis ... [more]
Y9461_DICDI1.951e-1428.96Probable protein phosphatase DDB_G0279461 OS=Dicty... [more]
P2C72_ARATH1.951e-1431.58Probable protein phosphatase 2C 72 OS=Arabidopsis ... [more]
P2C36_ORYSJ1.951e-1430.29Probable protein phosphatase 2C 36 OS=Oryza sativa... [more]
P2C33_ARATH1.951e-1439.13Probable protein phosphatase 2C 33 OS=Arabidopsis ... [more]
P2C74_ARATH2.548e-1432.63Probable protein phosphatase 2C 74 OS=Arabidopsis ... [more]
P2C75_ORYSJ3.328e-1427.64Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC31405E04EF CTVClemen1 Citrus clementina cDNA clone C31405E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875579 ID=FC875579; Name=FC875579; organism=Citrus clementina; type=EST; length=670bp
GGAAAAGTGAAGATGGAAAACTGAGATGTGGATACTCAAGTTTTAGGGGA
AAGAGGGCAACTATGGAGGATTTCTATGACATTAAAACTTCCAATGTTGA
TGGGCAAGCTGTCTGCATGTTTGGAGTCTTTGATGGTCATGGTGGTTCCC
GTGCGGCTGAGTATTTGAAGGAGCACCTCTTTGAGAATCTCTTGAAGCAT
CCACAATTTATGACAGACACCAAATTGGCTATAAGTGAAACATATCAACA
GACTGATGTCGACTTTTTGGAATCTGAAAGAGATACTTACAGGGATGATG
GTTCTACTGCTTCAACGGCTATATTGGTTGGTAACCATCTATATGTTGCC
AATGTCGGAGATTCTAGGACTGTAATATCCAAGGCTGGTAAAGCAATTCC
TCTTTCTGAGGATCATAAACCCAACAGATGTGATGAGCGGAAGAGAATTG
AAAATGCCGGAGGCGTTGTAATGTGGGCAGGCACTTGGAGAGTAGGAGGT
GTGCTAGCTATGTCTCGTGCTTTTGGTAACCGCATGCTGAAGCAATTTGT
CGTTGCGGAACCTGAGATCCAGGACCTTGAAGTAGATGAAGGATTTGAGC
TGCTTGTGCTTGCAAGTGATGGACTATGGGATGTAGTACCCAATGAGGAT
GCTGTTGCACTTGCCCGAAC
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