FC875579

Overview
NameFC875579
Unique NameFC875579
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10268 contig Ccv1_Contig10268:1..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.467e-35
Identity = 90/223 (40.36%), Postives = 126/223 (56.50%), Query Frame = 3
Query:   36 SSFRGKRATMEDFYDIKTSNVDGQA-VCMFGVFDGHGGSRAAEYLKEHLFENLL------------KHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWA--GTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEV-DEGFELLVLASDGLWDVVPNEDAV 656
            +S RG R  MED Y + T  ++G + +  +GV+DGHGG  A +++   L  N++              P        AI   Y  TD +FL          G+ A+TA+++   LYVAN+GD R VIS+ G A  L+ DH P R DER RIE++GG V     G WRV   LA++R+FG+  LK++VVAEPE+    +   G E LV+ASDGLW+ V N++AV
Sbjct:  137 ASRRGLRHAMEDGYGVITHKIEGHSQMAFYGVYDGHGGRAAVDFVAGRLGNNVVAAAEKQRLSEKASSPAAADHVAAAIRAAYLATDSEFLSQGTR----GGACAATALVIDGDLYVANLGDCRAVISRHGAAAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGDGGLKRWVVAEPEVSRTPLAGAGCEFLVIASDGLWNKVSNQEAV 355          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.217e-34
Identity = 92/238 (38.66%), Postives = 135/238 (56.72%), Query Frame = 3
Query:   30 GYSSFRGKRATMED--------FYDIKTSNVDGQ-----AVCMFGVFDGHGGSRAAEYLKEH----LFENLLKHPQFMTDT-------KLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            G++S  G+R  MED              S +DG+     A   FGV+DGHGGS+ A Y +E     L E + K    + D        K A+  ++ + D +      +T    GST+  A++  +H++VAN GDSR V+ +   A+PLS DHKP+R DE  RIE AGG V+ W G  RV GVLAMSR+ G+R LK  ++ +PE+  ++  +  + L+LASDG+WDV+ +E+A  +AR
Sbjct:  130 GFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV---GSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMAR 363          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.424e-34
Identity = 97/244 (39.75%), Postives = 128/244 (52.46%), Query Frame = 3
Query:   30 GYSSFRGKRATMEDFYDIKTS----NVDGQA-VCMFGVFDGHGGSRAAE--------YLKEHLFENLLKHPQ------------------FMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            G  S  G+   MED   +K +     V+ Q  V  F V+DGHGGS+ +         ++KE L +NL +  +                  F    ++A S     T V     +       GSTA TA+L  +H+ VAN GDSR V+ + G AIPLS DHKP+R DER RIE AGG V+     RV G+LA SRA G+R LK  V  EPE+  +  + G E LVLASDGLWDV+ ++ A  +AR
Sbjct:  110 GIVSVMGRSRKMEDSVTVKPNLCKPEVNRQRPVHFFAVYDGHGGSQVSTLCSTTMHTFVKEELEQNLEEEEEGSENDVVERKWRGVMKRSFKRMDEMATSTCVCGTSVPLCNCDPREAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYLKPMVAWEPEVTFMRRESGDECLVLASDGLWDVLSSQLACDIAR 353          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 96/242 (39.67%), Postives = 138/242 (57.02%), Query Frame = 3
Query:   30 GYSSFRGKRATMED-------FYDIKTSNV-DGQ---------AVCMFGVFDGHGGSRAAEYLKEH----LFENLLKH-PQFMT-DT-----KLAISETYQQTDVDFLESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            G +S  G+R  MED       F  + +S++ DG+         +   FGV+DGHGGS+ A Y +E     L E ++K  P+F   DT     K A+  ++ + D + +E+        GST+  A++   H++VAN GDSR V+ +    + LS DHKP+R DE  RIE AGG V+ W G  RV GVLAMSR+ G+R LK  V+ +PE+  +   +  + L+LASDGLWDV+ NE+   LAR
Sbjct:  114 GVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE-IETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGA-RVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLAR 353          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C03_ARATH (Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 98/249 (39.36%), Postives = 129/249 (51.81%), Query Frame = 3
Query:    3 KSEDGKLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCM------FGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDD--------------------GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            K  D + R G +S  G+R  MED   +  S V  Q          FGV+DGHG S  A   KE L E  L   + ++D K    E  +  +  F   +++  R                      GSTA  +++    + VAN GDSR V+ + GKA+PLS DHKP+R DE  RI+ AGG V+ W G  RV GVLAMSRA G+  LK +V +EPE+   +  E  E L+LA+DGLWDVV NE A  + R
Sbjct:  113 KETDLRPRYGVASVCGRRRDMEDAVALHPSFVRKQTEFSRTRWHYFGVYDGHGCSHVAARCKERLHE--LVQEEALSDKK---EEWKKMMERSFTRMDKEVVRWGETVMSANCRCELQTPDCDAVGSTAVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRIQEAGGRVIYWDGA-RVLGVLAMSRAIGDNYLKPYVTSEPEVTVTDRTEEDEFLILATDGLWDVVTNEAACTMVR 355          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.201e-33
Identity = 93/241 (38.59%), Postives = 135/241 (56.02%), Query Frame = 3
Query:   24 RCGYSSFRGKRATMEDFYDIKTSNV--DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLA--ISETYQQTDVDFLESE------------RDTYRDD---------GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            + G +S  G+R  MED   I  S +  + +    +GVFDGHG S  AE  +E L + + K  + M   +    + +++Q+ D +  + E            +++ R +         GSTA  +++    + V+N GDSR V+ + G AIPLS DHKP+R DE  RI+ AGG V+ W G  RV GVLAMSRA G+  LK +V+ +PE+   +  +  E L+LASDGLWDVVPNE A  +AR
Sbjct:  104 KIGTTSVCGRRRDMEDAVSIHPSFLQRNSENHHFYGVFDGHGCSHVAEKCRERLHDIVKKEVEVMASDEWTETMVKSFQKMDKEVSQRECNLVVNGATRSMKNSCRCELQSPQCDAVGSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQQAGGRVIYWDGA-RVLGVLAMSRAIGDNYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNETACGVAR 343          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.201e-33
Identity = 94/253 (37.15%), Postives = 131/253 (51.78%), Query Frame = 3
Query:   30 GYSSFRGKRATMED-------FYDIKTSNVDGQAVC-------------MFGVFDGHGGSRAAEYLKEHLFENLLKH---------------PQFMTDTKLAISETYQQTDVDF----LESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            G+ S  G+R  MED       F+DI    + G +V               FGV+DGHGG++ A Y +E L   L++                 +F    + A  + + + D +        E       GSTA  A++  +H+ VAN GDSR V+ +  + +PLS DHKPNR DE  RIE  GG V+ W G +RV GVLAMSR+ G+R LK +++  PEI  +   +  E LVLASDGLWDV+ NE+   +AR
Sbjct:  151 GHKSICGRRPEMEDAVVAVSRFFDIPLWMLTGNSVVDGLDPMSFRLPAHFFGVYDGHGGAQVANYCRERLHAALVEELSRIEGSVSGANLGSVEFKKKWEQAFVDCFSRVDEEVGGNASRGEAVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKQPVPLSVDHKPNREDEYARIEAEGGKVIQWNG-YRVFGVLAMSRSIGDRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVAR 402          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.131e-33
Identity = 90/232 (38.79%), Postives = 127/232 (54.74%), Query Frame = 3
Query:   30 GYSSFRGKRATMED------FYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERD--------TYRDD----GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            G +S  G+R  MED      F+    +          GV+DGHG S  A   +E L E + +  +   D + +++ ++ + D++ +    D          R D    GSTA  ++L    + VAN GDSR V+ + GKAI LS DHKP+R DE  RI+ AGG V+ W G  RV GVLAMSRA G+  LK +V++ PE+   +   G + L+LASDGLWDVV NE A ++ R
Sbjct:  113 GVASVCGRRREMEDAVAVHPFFSRHQTEYSSTGFHYCGVYDGHGCSHVAMKCRERLHELVREEFEADADWEKSMARSFTRMDMEVVALNADGAAKCRCELQRPDCDAVGSTAVVSVLTPEKIIVANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISRPEVTVTDRANGDDFLILASDGLWDVVSNETACSVVR 343          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.314e-33
Identity = 95/262 (36.26%), Postives = 138/262 (52.67%), Query Frame = 3
Query:   30 GYSSFRGKRATMEDFY------------------DIKTSNVDGQAVCM----FGVFDGHGGSRAAEYLKEHL-------FENLLKHPQFMTDTKL------AISETYQQTDVDF-------------LESERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            G +S RG+ A MED                    D+    +D  A+ +    FGVFDGHGG+  A Y +E +        + L K+   M +  +        ++ +Q+ D +              + SE  T  + GSTA  A++  +H+ VAN GDSR V+ +  + + LS DHKP+R DER RIE  GG V+ W G +RV G+LAMSR+ G+R LK FV+ +PE+  +   +  + L+LASDGLWDVV NE+A  +AR
Sbjct:   62 GCASTRGRSAEMEDASAAVPRFADVPVRLLASRRDLDALGLDADALRLPAHLFGVFDGHGGAEVANYCRERIHVVLSEELKRLGKNLGEMGEVDMKEHWDDVFTKCFQRVDDEVSGRVTRVVNGGGEVRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNG-YRVSGILAMSRSIGDRYLKPFVIPKPEVMVVPRAKDDDCLILASDGLWDVVSNEEACKVAR 322          
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.075e-32
Identity = 98/249 (39.36%), Postives = 131/249 (52.61%), Query Frame = 3
Query:   30 GYSSFRGKRATMEDFYDIK----TSNVDGQAVC---------MFGVFDGHGGSRAAEYLKEHLFENLLKHPQFM-----------TDTKLAISETYQQTDVDFLES-----------ERDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGG-VVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668
            G  S  G+R  MED   I+     S  DG              F V+DGHGGSR AE  ++ +   L +                   K A+  ++ + D + + S           E   +R  GSTA  A++    + VAN GDSR V+S+ G A+PLS DHKP+R DE +R+E AGG V+ W G +RV GVLA SR+ G+  LK FV AEPE++ +E  +  E L+LASDGLWDVV NE A  +AR
Sbjct:   79 GSVSVIGRRREMEDAVAIERTFMASTGDGAGAIRGGGEGEEDFFAVYDGHGGSRVAEACRKRMHVVLAEEVSLRRLRGQSASGGDVRWKEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNG-YRVLGVLATSRSIGDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIAR 326          
The following BLAST results are available for this feature:
BLAST of FC875579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
P2C74_ORYSJ4.467e-3540.36Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
P2C56_ARATH2.217e-3438.66Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C75_ARATH8.424e-3439.75Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C77_ARATH1.877e-3339.67Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C03_ARATH1.877e-3339.36Protein phosphatase 2C 3 OS=Arabidopsis thaliana G... [more]
P2C37_ARATH3.201e-3338.59Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C06_ORYSJ3.201e-3337.15Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C78_ARATH7.131e-3338.79Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
P2C50_ORYSJ9.314e-3336.26Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C51_ORYSJ2.075e-3239.36Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC31405E04EF CTVClemen1 Citrus clementina cDNA clone C31405E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875579 ID=FC875579; Name=FC875579; organism=Citrus clementina; type=EST; length=670bp
GGAAAAGTGAAGATGGAAAACTGAGATGTGGATACTCAAGTTTTAGGGGA
AAGAGGGCAACTATGGAGGATTTCTATGACATTAAAACTTCCAATGTTGA
TGGGCAAGCTGTCTGCATGTTTGGAGTCTTTGATGGTCATGGTGGTTCCC
GTGCGGCTGAGTATTTGAAGGAGCACCTCTTTGAGAATCTCTTGAAGCAT
CCACAATTTATGACAGACACCAAATTGGCTATAAGTGAAACATATCAACA
GACTGATGTCGACTTTTTGGAATCTGAAAGAGATACTTACAGGGATGATG
GTTCTACTGCTTCAACGGCTATATTGGTTGGTAACCATCTATATGTTGCC
AATGTCGGAGATTCTAGGACTGTAATATCCAAGGCTGGTAAAGCAATTCC
TCTTTCTGAGGATCATAAACCCAACAGATGTGATGAGCGGAAGAGAATTG
AAAATGCCGGAGGCGTTGTAATGTGGGCAGGCACTTGGAGAGTAGGAGGT
GTGCTAGCTATGTCTCGTGCTTTTGGTAACCGCATGCTGAAGCAATTTGT
CGTTGCGGAACCTGAGATCCAGGACCTTGAAGTAGATGAAGGATTTGAGC
TGCTTGTGCTTGCAAGTGATGGACTATGGGATGTAGTACCCAATGAGGAT
GCTGTTGCACTTGCCCGAAC
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