FC875579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.443e-26 Identity = 83/237 (35.02%), Postives = 121/237 (51.05%), Query Frame = 3 Query: 21 LRCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQF--------MTDTKLAISETYQQTDVDF-LESERDTYRD-DGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLE-VDEGFELLVLASDGLWDVVPNEDAVALAR 668 LR G SS +G R MED + G + F V+DGH GS+ A+Y EHL +++ + F + + K I + + D + SE+ D GSTA ++ H Y N GDSR ++ + K ++DHKP+ E++RI+NAGG VM RV G LA+SRA G+ K Q V EPE+ D+E +E + ++LA DG+WDV+ NE+ R Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFRGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVR 255
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.103e-25 Identity = 83/235 (35.32%), Postives = 116/235 (49.36%), Query Frame = 3 Query: 21 LRCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTK--LAISETYQQTDVD----FLESE---------RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 650 LR G SS +G R MED + G + F V+DGH GSR A Y HL E++ + F K A+ + + FL+ + R+ GSTA ++ H+Y N GDSR V+ + G+ ++DHKP E++RI+NAGG VM RV G LA+SRA G+ K Q V EPE+ ++ E E +VLA DG+WDV+ NE+ Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEE 253
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PP2C4_PARTE (Probable protein phosphatase 2C 4 OS=Paramecium tetraurelia GN=GSPATT00020181001 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.440e-25 Identity = 80/227 (35.24%), Postives = 128/227 (56.39%), Query Frame = 3 Query: 36 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL--AISETYQQTDVDFL--ESERDTYR----DD-----GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 650 S +G R TMED + I ++ Q + +FGVFDGHGG A+++++H E L K+ F D K A+ ET+ + D L E +++ + DD G TA+ A+ N LYVAN GDSR+V+ + +S DHKP+ +E+ RIE AGG V RV G L +SRA G+ R +Q ++A P+I+ +E+++ + L++ DG+++ + ++D Sbjct: 27 SEMQGWRNTMEDAH-IHVCDLQ-QDLSIFGVFDGHGGKEVAQFVEKHFIEELQKNKNFK-DQKFEDALRETFLKMDELLLTPEGQKEIIQIKGGDDEASYAGCTANVALFHKNVLYVANAGDSRSVLCRNNTNYDMSVDHKPDNYEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKRDSKLRSNEQLIIALPDIKKVELNQTDKFLLMGCDGVFETLDHQD 247
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.457e-25 Identity = 82/235 (34.89%), Postives = 113/235 (48.09%), Query Frame = 3 Query: 21 LRCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL------AISETYQQTDVDFLESE---------RDTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 650 LR G SS +G R MED + G F V+DGH GSR A Y HL E++ + F K ++ FL+ + R+ GSTA ++ H+Y N GDSR V+ + G+ ++DHKP E++RI+NAGG VM RV G LA+SRA G+ K Q V EPE+ ++ E E +VLA DG+WDV+ NE+ Sbjct: 22 LRYGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEE 253
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4) HSP 1 Score: 115.161 bits (287), Expect = 3.208e-25 Identity = 82/256 (32.03%), Postives = 125/256 (48.83%), Query Frame = 3 Query: 36 SSFRGKRATMEDFYDIKTSNVDGQA-VCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESE----------------RDTYRD------------------DGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWA-GTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668 S+ +G R+TMED + N+D FGV+DGHGGS A Y HL +L+ F ++ A+ +++ + D + L ++ R R +G TA ++ + V N GD+R VIS+ G+AI LS DHKPN +E +RI AGG V ++ G+ RV +A+SRA G+ R +Q + PEI+ ++ + E LV+A DG+WDV+ N+ V R Sbjct: 30 SAMQGYRSTMEDAH-ATIENLDALTNTSFFGVYDGHGGSAVARYCANHLHNKVLEQEDFSSNLANALRQSFFRMD-EMLRNQAASKELTEYGSGNEYWRTAGRSWLRCAPCVLGPVYCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVR 283
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.190e-25 Identity = 89/260 (34.23%), Postives = 127/260 (48.85%), Query Frame = 3 Query: 6 SEDGKLRCGYSSF--RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESE--RDTYRD--------------------------DGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 668 SE R Y+S+ +G R MED ++ ++D FGV+DGHGG+ A Y + LL+ ++ + AI+ + D D S R++ +GSTA I+ GN + V NVGDSR V+SK G+AI LS DHKP+ ER+RI+ AGG V R+ G+LA SRA G NR + +Q V P+I+ + + E LV+ASDG+WD + N + V R Sbjct: 16 SEGENHRVKYASYTTQGFRPHMEDALAVEL-DLDA-TTSFFGVYDGHGGAEVAMYCAKRFHTMLLEDVDYINNLPNAITSVCFRLDDDLQRSNEWRESLNPCANRNCLTNICANLHHFTEDYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVF---LQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVR 270
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.148e-25 Identity = 75/226 (33.19%), Postives = 123/226 (54.42%), Query Frame = 3 Query: 36 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESE--------RDTYRDD---GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 650 S +G R TMED + + + Q V +FGVFDGHGG A+++++H + LLK+ F + A+ ET+ + D L E + T D+ G TA+ A++ N LYVAN GDSR+V+ + +S DHKP+ +E+ RIE AGG V RV G L +SRA G+ R +Q ++A P+++ E+ + +++ DG+++ + +++ Sbjct: 27 SEMQGWRNTMEDAHIHRPDII--QDVSVFGVFDGHGGREVAQFVEKHFVDELLKNKNFKEQKFEEALKETFLKMDELLLTPEGQKELNQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRSVLCRNNTNHDMSVDHKPDNPEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTELTPQDKFILMGCDGVFETLNHQE 247
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.335e-25 Identity = 78/225 (34.67%), Postives = 122/225 (54.22%), Query Frame = 3 Query: 21 LRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTD--------VDFLESER---DTYRDDGSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWD 632 L+ + +G R TMED + I N++ V +F VFDGHGGS A + + H E L+K+ + + A++ET+ + D +D L R D G TA+ A++VG LYVAN GDSR+ +++ GK +S+DHKP+ E+KRIE AGG V RV G L++SRA G+ K Q + A P+++ ++ + L++ DG+++ Sbjct: 22 LQYAATHMQGWRNTMEDAH-ISDLNIEPD-VHLFAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGLDELNKIRGVTDEASLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFV---SDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFE 241
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.335e-25 Identity = 75/226 (33.19%), Postives = 123/226 (54.42%), Query Frame = 3 Query: 36 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESE--------RDTYRDD---GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 650 S +G R TMED + + V Q V +FGVFDGHGG A+++++H + LLK+ F + A+ ET+ + D + E + T D+ G TA+ A++ N LYVAN GDSR+V+ + +S DHKP+ +E+ RIE AGG V RV G L +SRA G+ R +Q ++A P+++ E+ + +++ DG+++ + +++ Sbjct: 27 SEMQGWRNTMEDAHIHRPDIV--QDVSVFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEDALKETFLKMDELLMTPEGAKELNNYKATDTDESYAGCTANVALIHKNTLYVANAGDSRSVLCRNNTNFDMSVDHKPDNNEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKSDSKLRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVFETLNHQE 247
BLAST of FC875579 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.219e-24 Identity = 92/276 (33.33%), Postives = 129/276 (46.74%), Query Frame = 3 Query: 6 SEDG---KLRCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT-DTKLAISETYQQTDV----------------------DFLE--------SERDTYRDD----------------GSTASTAILVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 656 SEDG KL+ G SS +G RA MED + N+D + FGVFDGHGG A++ ++L +L+ + D A+ + + D +E S+ + +DD G TA A++ N L VAN GDSR VIS+AG+A LS DHKP ER RI AGG + R+ G L ++RA G N+ L KQ V A P+I +E+ + + LVLA DG+WD + ++ V Sbjct: 14 SEDGENDKLKLGLSSMQGWRANMEDAHSALL-NLDNET-SFFGVFDGHGGRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMMRGQRGWRELSALGDKINKIGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCGCTACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMG---RINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLV 284 The following BLAST results are available for this feature:
BLAST of FC875579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 191
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875579 ID=FC875579; Name=FC875579; organism=Citrus clementina; type=EST; length=670bpback to top |