FC875580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R +R +T +A Sbjct: 3 LKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R +R +T +A Sbjct: 3 LKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R +R +T +A Sbjct: 3 LKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R +R +T +A Sbjct: 3 LKRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + ++Y R +R +T +A Sbjct: 3 LKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 50/143 (34.97%), Postives = 83/143 (58.04%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +++ KE + L + P GI ++++ + GP +P+E GVF+++L L D+P S PK F+TKI+HPNI G IC++ LK W+P+L +R +L+ ++ LL P P+ L ++ N E R+AR +T +A Sbjct: 6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYA 148
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 51/143 (35.66%), Postives = 79/143 (55.24%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 K++ KEL+ L PP G DD A I GPA +P+ GVF + + D+P PPK F TK++HPNI +NG IC++ LK+ W+P+L + VL+ + LL +P P+ L + + + +Y A+ +T +A Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21 Identity = 45/136 (33.09%), Postives = 78/136 (57.35%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 649 ++L ++ K + PP G+ D+ T A I GPA TP+E+G FR+ + +P+ PP+ F++++FHPN+ NGE+C++ L+ W+P+ + VL ++ LL +P S N +A + +N EY + R Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVR 142
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 239 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 670 +K++ +EL L + PP G DD A I GPA +PY GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + + + Y AR +T +A Sbjct: 3 LKRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYA 146
BLAST of FC875580 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 2 Query: 242 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 640 K+L + K L + PP GI D++ A I GP TP++ G F++ L + D+P+ PP F++++FHPNI +G IC++ L+ W+P + VL ++ LL +P P+S N +A ++ EN EY R Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNR 139 The following BLAST results are available for this feature:
BLAST of FC875580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875580 ID=FC875580; Name=FC875580; organism=Citrus clementina; type=EST; length=706bpback to top |