FC875583

Overview
NameFC875583
Unique NameFC875583
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length783
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA_STRAW (Pyrophosphate-energized proton pump OS=Streptomyces avermitilis GN=hppA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.451e-33
Identity = 100/264 (37.88%), Postives = 130/264 (49.24%), Query Frame = 2
Query:    5 LCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXX--------------EALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFEACS*N-ISA*YLGK 751
            L + VL+  EG   M +I+ A+++GA  +   Q  T+   A    +V F + L       Q A   GRS         FL+GAL S   GY GMW                                +A++IA R GG                ++      LG      +   D P +L G+G GA+ +A+F ++GGGI+TKAADVGADLVGKVEQGIPEDDPRN A IAD VGDNVGDCA   ADLFE+ +   ++A  LGK
Sbjct:   46 LVRQVLAAGEGTDSMKKIAAAVQEGANAYLGRQMRTLGVFA---VVVFFLLMLLPADDWNQRA---GRS-------VFFLIGALFSATTGYTGMWLAVRSNVRVAAAAREATPAEGEPEKDLTAVSHKAMKIAFRTGGV-------------VGMFTVGLGLLGASCVVLVYAADAPKVLEGFGLGAALIAMFMRVGGGIFTKAADVGADLVGKVEQGIPEDDPRNAATIADNVGDNVGDCAGMAADLFESYAVTLVAALILGK 283          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA_CLOTE (Pyrophosphate-energized proton pump OS=Clostridium tetani GN=hppA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.476e-33
Identity = 92/237 (38.82%), Postives = 120/237 (50.63%), Query Frame = 2
Query:    5 LCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFEA 715
            L  ++  +  G   M +I+  I DGA  F +T+Y  ++    ++ +++              A  +G   +AC     F+LGA+ S  AGY GM                   +AL IA   G                 +Y  F         G+M+       + G+G GAS +ALFA++GGGIYTKAADVGADLVGKVE GIPEDDPRNPAVIAD VGDNVGD A  GADLFE+
Sbjct:   22 LSSFISKESAGNERMQEIAGHIHDGAMAFLKTEYKYLTGFIVIVTVIL--------------AIFVGWQTAAC-----FILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNIAFSGGAVMGMSVVGLGVVGIGIMYYIF--------GGNME------FVTGFGLGASSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFES 225          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIN (Pyrophosphate-energized proton pump OS=Leptospira interrogans GN=hppA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.233e-33
Identity = 90/227 (39.65%), Postives = 119/227 (52.42%), Query Frame = 2
Query:   44 EMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFY-VWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFEACS 721
            ++ +IS AI +GA  F   +Y  IS     +A++I  +          +  G    N    T  AF+ GAL S I+G++GM                   +A ++A  +G                 L+  F  ++ GV+    M+       L G+G G S VALF ++GGGIYTKAADVGADLVGKVE+GIPEDDPRNPA IAD VGDNVGD A  GADLF +C+
Sbjct:   42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLL---------DNPGSEGFNDGIYTAIAFVSGALISCISGFIGMKIATAGNVRTAEAAKSSMAKAFRVAFDSGAVMGFGLVGLAILGMIVLFLVFTGMYPGVEKHFLMES------LAGFGLGGSAVALFGRVGGGIYTKAADVGADLVGKVEKGIPEDDPRNPATIADNVGDNVGDVAGMGADLFGSCA 253          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA_LEPIC (Pyrophosphate-energized proton pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=hppA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.233e-33
Identity = 90/227 (39.65%), Postives = 119/227 (52.42%), Query Frame = 2
Query:   44 EMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFY-VWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFEACS 721
            ++ +IS AI +GA  F   +Y  IS     +A++I  +          +  G    N    T  AF+ GAL S I+G++GM                   +A ++A  +G                 L+  F  ++ GV+    M+       L G+G G S VALF ++GGGIYTKAADVGADLVGKVE+GIPEDDPRNPA IAD VGDNVGD A  GADLF +C+
Sbjct:   42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLL---------DNPGSEGFNDGIYTAIAFVSGALISCISGFIGMKIATAGNVRTAEAAKSSMAKAFRVAFDSGAVMGFGLVGLAILGMIVLFLVFTGMYPGVEKHFLMES------LAGFGLGGSAVALFGRVGGGIYTKAADVGADLVGKVEKGIPEDDPRNPATIADNVGDNVGDVAGMGADLFGSCA 253          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA_BACTN (Pyrophosphate-energized proton pump OS=Bacteroides thetaiotaomicron GN=hppA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.407e-33
Identity = 94/240 (39.17%), Postives = 122/240 (50.83%), Query Frame = 2
Query:    2 YLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVD--TPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFEA 715
            Y  K ++ + EG P+M +I+ A+R GA  + + QY  +      L LVI    +         A G    N       AFL G   SG++G++GM                     L+IA R+G                  Y      +  D  TP + K+  +   ++ +G GAS  ALFA++GGGIYTKAADVGADLVGKVE GIPEDDPRNPA IAD VGDNVGD A  GADL+E+
Sbjct:   22 YFHKQMMKESEGTPQMIKIAAAVRKGAMSYLKQQYKIVG--CVFLGLVILFSIM---------AYGFHVQN--VWVPIAFLTGGFFSGLSGFLGMKTATYASARTANAARNSLNSGLRIAFRSGAVMGLVVVGLGLLDISFWYLLLNAVIPADALTP-THKLCVITTTMLTFGMGASTQALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPATIADNVGDNVGDVAGMGADLYES 247          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA_STRCO (Pyrophosphate-energized proton pump OS=Streptomyces coelicolor GN=hppA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.229e-32
Identity = 99/264 (37.50%), Postives = 129/264 (48.86%), Query Frame = 2
Query:    5 LCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXX--------------EALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFEACS*N-ISA*YLGK 751
            L + VL+  EG   M +I+ A+++GA  +   Q  T+   A    +V F + L       Q A   GRS         FL+GA  S   GY+GMW                                +A +IA R GG                ++      LG      +   D P +L G+G GA+ +A+F ++GGGI+TKAADVGADLVGKVEQGIPEDDPRN A IAD VGDNVGDCA   ADLFE+ +   ++A  LGK
Sbjct:   39 LVRQVLAAGEGTDSMKKIAAAVQEGANAYLARQLRTLGVFA---VVVFFLLMLLPADDWNQRA---GRS-------IFFLIGAAFSAATGYIGMWLAVRSNVRVAAAAREATPAPGEPEKDLALVSHKATKIAFRTGGV-------------VGMFTVGLGLLGACCVVLVYAADAPKVLEGFGLGAALIAMFMRVGGGIFTKAADVGADLVGKVEQGIPEDDPRNAATIADNVGDNVGDCAGMAADLFESYAVTLVAALILGK 276          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA1_METMA (Pyrophosphate-energized proton pump 1 OS=Methanosarcina mazei GN=hppA1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.774e-31
Identity = 88/238 (36.97%), Postives = 118/238 (49.58%), Query Frame = 2
Query:   11 KWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAG---GFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFEA 715
            K V ++ EG   + +I+ AI  GA  +   QY  I+     +A+V+  +                   +  +T A F+ GA+ S  AGY GM                    A +++  +G   G S              +    Y          M +  L  ++ G+ FGAS +ALFA++GGGI+TKAADVGADLVGKVE GIPEDDPRNPAVIAD VGDNVGD A  GADL+E+
Sbjct:   24 KNVRNEGEGNELIKKITAAIHGGAMVYLNRQYRAIAVFVVFIAIVLALVL-----------------PNGVLTAACFVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAFKVSFASGTVMGMSVVGLGLFGLSLSFIILGNIYT--------DMDLFTLLNIIAGFSFGASSIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYES 236          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: AVP1_ARATH (Pyrophosphate-energized vacuolar membrane proton pump 1 OS=Arabidopsis thaliana GN=AVP1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.026e-31
Identity = 88/235 (37.45%), Postives = 113/235 (48.09%), Query Frame = 2
Query:   50 AQISDAIRDGAEGFFRTQYGTISKMACLLALVIF---------------CIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLF 709
            A+I  AI +GA  F  T+Y  +       A VIF               C Y    T     A+       A  +  AF+LGA+ S ++G++GM                   +A  +A R+G                     F ++ G D  G  +       + GYG G S +ALF ++GGGIYTKAADVGADLVGK+E+ IPEDDPRNPAVIAD VGDNVGD A  G+DLF
Sbjct:   79 AEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFSTDNKPCTYDTTRTCKPALAT-------AAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEARKGVGKAFIVAFRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEA------ITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLF 300          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: AVP_HORVU (Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.162e-31
Identity = 89/230 (38.70%), Postives = 114/230 (49.57%), Query Frame = 2
Query:   50 AQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNS----------ACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLF 709
            A+I  AI +GA  F  T Y  +     + A +IF   LF  +       G   + S          A  + A+FLLGA+ S ++G++GM                   +A   A R+G                     F ++ G D  G  +       + GYG G S +ALF ++GGGIYTKAADVGADLVGKVE+ IPEDDPRNPAVIAD VGDNVGD A  G+DLF
Sbjct:   72 AEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIF---LFLGSIEGFSTKGQPCTYSKGTCKPALYTALFSTASFLLGAITSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLSSSGLVVLYITINVFKMYYGDDWEGLFES------ITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLF 292          
BLAST of FC875583 vs. ExPASy Swiss-Prot
Match: HPPA_CAUCR (Pyrophosphate-energized proton pump OS=Caulobacter crescentus GN=hppA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.805e-31
Identity = 89/228 (39.04%), Postives = 114/228 (50.00%), Query Frame = 2
Query:   35 GPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTPQQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWXXXXXXXXXXXXXXXXXXEALQIAVRAGGFSXXXXXXXXXXXXXXLYATFYVWL--GVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFE 712
            G   M +I+ AI++GA+ + + QY TIS +     +VI  +  F  +  Q                  F LGA+ SG AG+ GM                   + L +A  +G  +               Y   YV L  G +  G + +  L    V  GFGAS +++FA+LGGGI+TK ADVG DLVGKVE GIPEDDPRN A IAD VGDNVGDCA   ADLFE
Sbjct:   32 GNARMQEIAAAIQEGAQAYLKRQYTTISIVG---VVVIAALAFFFKSWEQP---------------VGFALGAILSGAAGFAGMLISVRANVRTAQASSESLAKGLSMAFTSGAVTGMLVAGFALLGVAGYY---YVLLATGHEATGRVVIDSL----VALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNAATIADNVGDNVGDCAGMAADLFE 234          
The following BLAST results are available for this feature:
BLAST of FC875583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
HPPA_STRAW1.451e-3337.88Pyrophosphate-energized proton pump OS=Streptomyce... [more]
HPPA_CLOTE2.476e-3338.82Pyrophosphate-energized proton pump OS=Clostridium... [more]
HPPA_LEPIN3.233e-3339.65Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_LEPIC3.233e-3339.65Pyrophosphate-energized proton pump OS=Leptospira ... [more]
HPPA_BACTN9.407e-3339.17Pyrophosphate-energized proton pump OS=Bacteroides... [more]
HPPA_STRCO1.229e-3237.50Pyrophosphate-energized proton pump OS=Streptomyce... [more]
HPPA1_METMA1.774e-3136.97Pyrophosphate-energized proton pump 1 OS=Methanosa... [more]
AVP1_ARATH3.026e-3137.45Pyrophosphate-energized vacuolar membrane proton p... [more]
AVP_HORVU5.162e-3138.70Pyrophosphate-energized vacuolar membrane proton p... [more]
HPPA_CAUCR8.805e-3139.04Pyrophosphate-energized proton pump OS=Caulobacter... [more]

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Properties
Property NameValue
Genbank descriptionC31405E08EF CTVClemen1 Citrus clementina cDNA clone C31405E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875583 ID=FC875583; Name=FC875583; organism=Citrus clementina; type=EST; length=783bp
ATATCTTTGTAAGTGGGTACTCTCAAAGGATGAGGGACCTCCAGAGATGG
CTCAGATATCAGATGCAATACGAGATGGAGCTGAAGGCTTCTTCAGGACC
CAGTATGGGACTATCTCTAAGATGGCATGTTTGCTTGCTTTGGTGATTTT
TTGCATTTACCTGTTTCGCAATACAACCCCTCAACAAGAAGCTTCTGGCA
TTGGGAGGTCAAATTCTGCCTGTATTACTGTTGCTGCATTCCTTTTGGGG
GCTTTATGTTCAGGAATTGCAGGATATGTAGGGATGTGGGTGTCTGTACG
TGCAAATGTTCGAGTGTCCAGTGCTGCAAGACGGTCTGCAAGAGAGGCAT
TGCAGATAGCTGTTCGTGCTGGTGGTTTCTCTGCTATTGTGGTTGTTGGT
ATGGCTGTAATTGGCATAGCCATCCTTTATGCCACATTTTATGTTTGGCT
TGGAGTGGATACACCAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTC
TTGTGGGGTATGGTTTTGGGGCTTCATTTGTTGCACTGTTTGCCCAGTTG
GGTGGTGGAATATACACAAAAGCTGCTGATGTTGGGGCAGATCTTGTTGG
GAAAGTGGAGCAGGGAATACCTGAAGATGATCCTCGGAATCCTGCTGTCA
TTGCAGATTTGGTTGGAGACAATGTGGGTGATTGTGCTGCACGGGGTGCT
GATCTTTTTGAAGCATGCAGCTGAAATATCAGTGCTTGATACTTGGGGAA
ACATGGGTCACGTGTAACTTGAAATCATCTGGC
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